RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 SPRR2GQ9BYE4 73 aa2.3□□□□□ -2.04
CD47-201ENST00000355354 PRO2289Q9P1D8 64 aa2.29□□□□□ -2.04
CD47-201ENST00000355354 KRTAP10-10P60014 251 aa2.29□□□□□ -2.04
CD47-201ENST00000355354 LCE3AQ5TA76 89 aa2.26□□□□□ -2.05
CD47-201ENST00000355354 A0A0A0MQY5 61 aa2.25□□□□□ -2.05
CD47-201ENST00000355354 KRTAP4-9Q9BYQ8 210 aa2.24□□□□□ -2.05
CD47-201ENST00000355354 KRTAP10-12P60413 245 aa2.22□□□□□ -2.05
CD47-201ENST00000355354 LCE1AQ5T7P2 110 aa2.21□□□□□ -2.06
CD47-201ENST00000355354 KRTAP20-1Q3LI63 56 aa2.19□□□□□ -2.06
CD47-201ENST00000355354 KRTAP19-7Q3SYF9 63 aa2.18□□□□□ -2.06
CD47-201ENST00000355354 KRTAP2-3P0C7H8 128 aa2.17□□□□□ -2.06
CD47-201ENST00000355354 KRTAP2-4Q9BYR9 128 aa2.17□□□□□ -2.06
CD47-201ENST00000355354 MUC5ACP98088 5654 aa2.16□□□□□ -2.06
CD47-201ENST00000355354 KRTAP4-6Q9BYQ5 205 aa2.16□□□□□ -2.06
CD47-201ENST00000355354 KRTAP23-1A1A580 65 aa2.12□□□□□ -2.07
CD47-201ENST00000355354 SPRR5A0A1B0GTR4 108 aa2.09□□□□□ -2.07
CD47-201ENST00000355354 KRTAP2-2Q9BYT5 123 aa2.09□□□□□ -2.07
CD47-201ENST00000355354 KRTAP2-1Q9BYU5 128 aa2.09□□□□□ -2.07
CD47-201ENST00000355354 KRTAP19-5Q3LI72 72 aa2.08□□□□□ -2.08
CD47-201ENST00000355354 KRTAP5-4Q6L8H1 288 aa2.08□□□□□ -2.08
CD47-201ENST00000355354 MUC5BQ9HC84 5762 aaPredicted RBP2.08□□□□□ -2.08
CD47-201ENST00000355354 KRTAP5-10Q6L8G5 202 aa2.06□□□□□ -2.08
CD47-201ENST00000355354 HMCN1Q96RW7 5635 aa2.04□□□□□ -2.08
CD47-201ENST00000355354 LCE5AQ5TCM9 118 aa2.03□□□□□ -2.08
CD47-201ENST00000355354 KRTAP19-4Q3LI73 84 aa2.02□□□□□ -2.09
CD47-201ENST00000355354 AHNAK2Q8IVF2 5795 aa2.02□□□□□ -2.09
CD47-201ENST00000355354 KRTAP8-1Q8IUC2 63 aa2□□□□□ -2.09
CD47-201ENST00000355354 KRTAP5-7Q6L8G8 165 aa1.98□□□□□ -2.09
CD47-201ENST00000355354 KRTAP5-5Q701N2 237 aaPredicted RBP1.97□□□□□ -2.09
CD47-201ENST00000355354 MT1GP13640 62 aa1.95□□□□□ -2.1
CD47-201ENST00000355354 SPRR2EP22531 72 aa1.94□□□□□ -2.1
CD47-201ENST00000355354 SPRR2BP35325 72 aa1.94□□□□□ -2.1
CD47-201ENST00000355354 SPRR2AP35326 72 aa1.94□□□□□ -2.1
CD47-201ENST00000355354 KRTAP12-3P60328 96 aa1.93□□□□□ -2.1
CD47-201ENST00000355354 LCE3BQ5TA77 95 aa1.93□□□□□ -2.1
CD47-201ENST00000355354 KRTAP5-3Q6L8H2 238 aa1.91□□□□□ -2.1
CD47-201ENST00000355354 MT1EP04732 61 aa1.9□□□□□ -2.11
CD47-201ENST00000355354 LCE1DQ5T752 114 aa1.89□□□□□ -2.11
CD47-201ENST00000355354 SPRR2FQ96RM1 72 aa1.89□□□□□ -2.11
CD47-201ENST00000355354 MT1LQ93083 61 aa1.88□□□□□ -2.11
CD47-201ENST00000355354 INE1O15225 51 aa1.87□□□□□ -2.11
CD47-201ENST00000355354 SPRR2DP22532 72 aa1.87□□□□□ -2.11
CD47-201ENST00000355354 KRTAP5-2Q701N4 177 aa1.84□□□□□ -2.11
CD47-201ENST00000355354 KRTAP19-3Q7Z4W3 81 aa1.83□□□□□ -2.12
CD47-201ENST00000355354 LCE4AQ5TA78 99 aa1.82□□□□□ -2.12
CD47-201ENST00000355354 GPR98Q8WXG9 6306 aa1.81□□□□□ -2.12
CD47-201ENST00000355354 LCE3CQ5T5A8 94 aa1.81□□□□□ -2.12
CD47-201ENST00000355354 KRTAP6-1Q3LI64 71 aa1.8□□□□□ -2.12
CD47-201ENST00000355354 KRTAP9-9Q9BYP9 154 aa1.8□□□□□ -2.12
CD47-201ENST00000355354 KRTAP9-4Q9BYQ2 154 aa1.8□□□□□ -2.12
CD47-201ENST00000355354 MT1MQ8N339 61 aa1.77□□□□□ -2.13
CD47-201ENST00000355354 KRTAP4-12Q9BQ66 201 aa1.76□□□□□ -2.13
CD47-201ENST00000355354 KRTAP20-2Q3LI61 65 aa1.76□□□□□ -2.13
CD47-201ENST00000355354 KRTAP5-8O75690 187 aa1.71□□□□□ -2.14
CD47-201ENST00000355354 KRTAP4-2Q9BYR5 136 aa1.68□□□□□ -2.14
CD47-201ENST00000355354 KRTAP12-4P60329 112 aa1.68□□□□□ -2.14
CD47-201ENST00000355354 KRTAP5-1Q6L8H4 278 aa1.62□□□□□ -2.15
CD47-201ENST00000355354 AHNAKQ09666 5890 aaKnown RBP1.62□□□□□ -2.15
CD47-201ENST00000355354 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.6□□□□□ -2.15
CD47-201ENST00000355354 MT4P47944 62 aa1.59□□□□□ -2.16
CD47-201ENST00000355354 KRTAP4-11Q9BYQ6 195 aa1.58□□□□□ -2.16
CD47-201ENST00000355354 LCE1EQ5T753 118 aa1.56□□□□□ -2.16
CD47-201ENST00000355354 KRTAP6-2Q3LI66 62 aa1.56□□□□□ -2.16
CD47-201ENST00000355354 PRM1P04553 51 aa1.51□□□□□ -2.17
CD47-201ENST00000355354 MT1AP04731 61 aa1.46□□□□□ -2.18
CD47-201ENST00000355354 MT3P25713 68 aa1.41□□□□□ -2.18
CD47-201ENST00000355354 KRTAP4-4Q9BYR3 166 aa1.4□□□□□ -2.19
CD47-201ENST00000355354 LCE3EQ5T5B0 92 aa1.39□□□□□ -2.19
CD47-201ENST00000355354 LCE3DQ9BYE3 92 aa1.39□□□□□ -2.19
CD47-201ENST00000355354 KRTAP5-11Q6L8G4 156 aa1.37□□□□□ -2.19
CD47-201ENST00000355354 LCE1CQ5T751 118 aa1.32□□□□□ -2.2
CD47-201ENST00000355354 LCE1BQ5T7P3 118 aa1.32□□□□□ -2.2
CD47-201ENST00000355354 LCE1FQ5T754 118 aa1.19□□□□□ -2.22
CD47-201ENST00000355354 KRTAP21-2Q3LI59 83 aa1.16□□□□□ -2.22
CD47-201ENST00000355354 PHGR1C9JFL3 82 aa1.07□□□□□ -2.24
CD47-201ENST00000355354 KRTAP21-1Q3LI58 79 aa0.83□□□□□ -2.28
CD47-201ENST00000355354 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 67.6 ms