RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 KRTAP2-3P0C7H8 128 aa3.67□□□□□ -1.82
C11orf54-202ENST00000354421 KRTAP2-4Q9BYR9 128 aa3.67□□□□□ -1.82
C11orf54-202ENST00000354421 NDUFAF8A1L188 74 aa3.67□□□□□ -1.82
C11orf54-202ENST00000354421 MUC17Q685J3 4493 aa3.65□□□□□ -1.82
C11orf54-202ENST00000354421 KRTAP10-5P60370 271 aa3.65□□□□□ -1.82
C11orf54-202ENST00000354421 KRTAP9-6A8MVA2 160 aa3.58□□□□□ -1.84
C11orf54-202ENST00000354421 PP632Q6XCG6 107 aa3.53□□□□□ -1.84
C11orf54-202ENST00000354421 MDN1Q9NU22 5596 aa3.5□□□□□ -1.85
C11orf54-202ENST00000354421 PLAC4Q8WY50 150 aa3.5□□□□□ -1.85
C11orf54-202ENST00000354421 KRTAP2-1Q9BYU5 128 aa3.49□□□□□ -1.85
C11orf54-202ENST00000354421 R4GN34 69 aa3.49□□□□□ -1.85
C11orf54-202ENST00000354421 MT1HP80294 61 aa3.47□□□□□ -1.85
C11orf54-202ENST00000354421 LUZP6Q538Z0 58 aa3.43□□□□□ -1.86
C11orf54-202ENST00000354421 A0A0A0MQY5 61 aa3.41□□□□□ -1.86
C11orf54-202ENST00000354421 AHNAK2Q8IVF2 5795 aa3.38□□□□□ -1.87
C11orf54-202ENST00000354421 SEC61BP60468 96 aaKnown RBP3.38□□□□□ -1.87
C11orf54-202ENST00000354421 KRTAP10-12P60413 245 aa3.36□□□□□ -1.87
C11orf54-202ENST00000354421 KRTAP19-6Q3LI70 58 aa3.34□□□□□ -1.87
C11orf54-202ENST00000354421 M0R2T5 61 aa3.33□□□□□ -1.88
C11orf54-202ENST00000354421 CAMK2N1Q7Z7J9 78 aa3.33□□□□□ -1.88
C11orf54-202ENST00000354421 KRTAP19-2Q3LHN2 52 aa3.32□□□□□ -1.88
C11orf54-202ENST00000354421 KRTAP4-1Q9BYQ7 146 aa3.32□□□□□ -1.88
C11orf54-202ENST00000354421 KRTAP5-8O75690 187 aa3.31□□□□□ -1.88
C11orf54-202ENST00000354421 SPRR5A0A1B0GTR4 108 aa3.3□□□□□ -1.88
C11orf54-202ENST00000354421 TNP1P09430 55 aa3.27□□□□□ -1.89
C11orf54-202ENST00000354421 HMCN1Q96RW7 5635 aa3.27□□□□□ -1.89
C11orf54-202ENST00000354421 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
C11orf54-202ENST00000354421 KRTAP5-7Q6L8G8 165 aa3.22□□□□□ -1.89
C11orf54-202ENST00000354421 FLGP20930 4061 aaPredicted RBP3.21□□□□□ -1.89
C11orf54-202ENST00000354421 KRTAP5-10Q6L8G5 202 aa3.19□□□□□ -1.9
C11orf54-202ENST00000354421 DSTQ03001 7570 aaKnown RBP3.13□□□□□ -1.91
C11orf54-202ENST00000354421 AHNAKQ09666 5890 aaKnown RBP3.12□□□□□ -1.91
C11orf54-202ENST00000354421 INE1O15225 51 aa3.12□□□□□ -1.91
C11orf54-202ENST00000354421 PRO2289Q9P1D8 64 aa3.12□□□□□ -1.91
C11orf54-202ENST00000354421 SPRR2GQ9BYE4 73 aa3.11□□□□□ -1.91
C11orf54-202ENST00000354421 SPRR2EP22531 72 aa3.1□□□□□ -1.91
C11orf54-202ENST00000354421 SPRR2BP35325 72 aa3.1□□□□□ -1.91
C11orf54-202ENST00000354421 SPRR2AP35326 72 aa3.1□□□□□ -1.91
C11orf54-202ENST00000354421 LCE3CQ5T5A8 94 aa3.08□□□□□ -1.92
C11orf54-202ENST00000354421 MUC5BQ9HC84 5762 aaPredicted RBP3.06□□□□□ -1.92
C11orf54-202ENST00000354421 LCE3AQ5TA76 89 aa3.06□□□□□ -1.92
C11orf54-202ENST00000354421 KRTAP8-1Q8IUC2 63 aa3.02□□□□□ -1.93
C11orf54-202ENST00000354421 SPRR2DP22532 72 aa3.01□□□□□ -1.93
C11orf54-202ENST00000354421 MT2AP02795 61 aa2.99□□□□□ -1.93
C11orf54-202ENST00000354421 KRTAP19-8Q3LI54 63 aa2.97□□□□□ -1.93
C11orf54-202ENST00000354421 MT1FP04733 61 aa2.95□□□□□ -1.94
C11orf54-202ENST00000354421 KRTAP10-10P60014 251 aa2.91□□□□□ -1.94
C11orf54-202ENST00000354421 KRTAP12-3P60328 96 aa2.9□□□□□ -1.94
C11orf54-202ENST00000354421 MT1XP80297 61 aa2.9□□□□□ -1.95
C11orf54-202ENST00000354421 MT1BP07438 61 aa2.89□□□□□ -1.95
C11orf54-202ENST00000354421 SPRR2FQ96RM1 72 aa2.89□□□□□ -1.95
C11orf54-202ENST00000354421 MUC5ACP98088 5654 aa2.87□□□□□ -1.95
C11orf54-202ENST00000354421 LCE3EQ5T5B0 92 aa2.79□□□□□ -1.96
C11orf54-202ENST00000354421 KRTAP5-5Q701N2 237 aaPredicted RBP2.77□□□□□ -1.97
C11orf54-202ENST00000354421 LCE1CQ5T751 118 aa2.76□□□□□ -1.97
C11orf54-202ENST00000354421 LCE1BQ5T7P3 118 aa2.76□□□□□ -1.97
C11orf54-202ENST00000354421 KRTAP19-5Q3LI72 72 aa2.73□□□□□ -1.97
C11orf54-202ENST00000354421 MT4P47944 62 aa2.7□□□□□ -1.98
C11orf54-202ENST00000354421 KRTAP19-7Q3SYF9 63 aa2.58□□□□□ -2
C11orf54-202ENST00000354421 MT1LQ93083 61 aa2.54□□□□□ -2
C11orf54-202ENST00000354421 MT1EP04732 61 aa2.51□□□□□ -2.01
C11orf54-202ENST00000354421 KRTAP12-4P60329 112 aa2.34□□□□□ -2.03
C11orf54-202ENST00000354421 MUC19Q7Z5P9 8384 aa2.34□□□□□ -2.03
C11orf54-202ENST00000354421 MT1GP13640 62 aa2.33□□□□□ -2.04
C11orf54-202ENST00000354421 MT1MQ8N339 61 aa2.33□□□□□ -2.04
C11orf54-202ENST00000354421 KRTAP19-3Q7Z4W3 81 aa2.31□□□□□ -2.04
C11orf54-202ENST00000354421 KRTAP20-2Q3LI61 65 aa2.3□□□□□ -2.04
C11orf54-202ENST00000354421 MT1AP04731 61 aa2.28□□□□□ -2.04
C11orf54-202ENST00000354421 SYNE1Q8NF91 8797 aaKnown RBP2.19□□□□□ -2.06
C11orf54-202ENST00000354421 LCE3DQ9BYE3 92 aa2.14□□□□□ -2.07
C11orf54-202ENST00000354421 KRTAP6-1Q3LI64 71 aa2.13□□□□□ -2.07
C11orf54-202ENST00000354421 PRM1P04553 51 aa2.09□□□□□ -2.07
C11orf54-202ENST00000354421 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
C11orf54-202ENST00000354421 KRTAP6-2Q3LI66 62 aa2□□□□□ -2.09
C11orf54-202ENST00000354421 PHGR1C9JFL3 82 aa1.9□□□□□ -2.11
C11orf54-202ENST00000354421 KRTAP21-1Q3LI58 79 aa1.48□□□□□ -2.17
C11orf54-202ENST00000354421 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 156.3 ms