RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 KRTAP5-9P26371 169 aa7.22□□□□□ -1.25
TRIM4-202ENST00000354241 MUC12Q9UKN1 5478 aa7.22□□□□□ -1.25
TRIM4-202ENST00000354241 LCE3CQ5T5A8 94 aa7.21□□□□□ -1.26
TRIM4-202ENST00000354241 KRTAP19-3Q7Z4W3 81 aa7.17□□□□□ -1.26
TRIM4-202ENST00000354241 KRTAP19-4Q3LI73 84 aa7.14□□□□□ -1.27
TRIM4-202ENST00000354241 KRTAP6-3Q3LI67 103 aa7.12□□□□□ -1.27
TRIM4-202ENST00000354241 KRTAP4-7Q9BYR0 210 aa7.11□□□□□ -1.27
TRIM4-202ENST00000354241 MT1GP13640 62 aa7.09□□□□□ -1.27
TRIM4-202ENST00000354241 A0A0A0MQY5 61 aa7.07□□□□□ -1.28
TRIM4-202ENST00000354241 LCE5AQ5TCM9 118 aa7.03□□□□□ -1.28
TRIM4-202ENST00000354241 MT1MQ8N339 61 aa7.03□□□□□ -1.28
TRIM4-202ENST00000354241 LCE1AQ5T7P2 110 aa7.01□□□□□ -1.29
TRIM4-202ENST00000354241 SPRR2EP22531 72 aa6.99□□□□□ -1.29
TRIM4-202ENST00000354241 SPRR2BP35325 72 aa6.99□□□□□ -1.29
TRIM4-202ENST00000354241 SPRR2AP35326 72 aa6.99□□□□□ -1.29
TRIM4-202ENST00000354241 MDN1Q9NU22 5596 aa6.94□□□□□ -1.3
TRIM4-202ENST00000354241 KRTAP4-3Q9BYR4 195 aa6.93□□□□□ -1.3
TRIM4-202ENST00000354241 KRTAP9-7A8MTY7 169 aa6.91□□□□□ -1.3
TRIM4-202ENST00000354241 KRTAP9-6A8MVA2 160 aa6.82□□□□□ -1.32
TRIM4-202ENST00000354241 SPRR2DP22532 72 aa6.74□□□□□ -1.33
TRIM4-202ENST00000354241 LOC100996750A0A140TA64 210 aa6.68□□□□□ -1.34
TRIM4-202ENST00000354241 NEBP20929 6669 aa6.62□□□□□ -1.35
TRIM4-202ENST00000354241 DSTQ03001 7570 aaKnown RBP6.6□□□□□ -1.35
TRIM4-202ENST00000354241 INE1O15225 51 aa6.48□□□□□ -1.37
TRIM4-202ENST00000354241 LCE3BQ5TA77 95 aa6.46□□□□□ -1.37
TRIM4-202ENST00000354241 KRTAP4-6Q9BYQ5 205 aa6.32□□□□□ -1.4
TRIM4-202ENST00000354241 KRTAP5-5Q701N2 237 aaPredicted RBP6.31□□□□□ -1.4
TRIM4-202ENST00000354241 KRTAP2-3P0C7H8 128 aa6.25□□□□□ -1.41
TRIM4-202ENST00000354241 KRTAP2-4Q9BYR9 128 aa6.25□□□□□ -1.41
TRIM4-202ENST00000354241 KRTAP2-1Q9BYU5 128 aa6.25□□□□□ -1.41
TRIM4-202ENST00000354241 MT1AP04731 61 aa6.21□□□□□ -1.42
TRIM4-202ENST00000354241 KRTAP6-1Q3LI64 71 aa6.17□□□□□ -1.42
TRIM4-202ENST00000354241 KRTAP20-1Q3LI63 56 aa6.14□□□□□ -1.43
TRIM4-202ENST00000354241 KRTAP2-2Q9BYT5 123 aa6.1□□□□□ -1.43
TRIM4-202ENST00000354241 KRTAP5-4Q6L8H1 288 aa6.03□□□□□ -1.44
TRIM4-202ENST00000354241 SYNE1Q8NF91 8797 aaKnown RBP5.95□□□□□ -1.46
TRIM4-202ENST00000354241 LCE4AQ5TA78 99 aa5.93□□□□□ -1.46
TRIM4-202ENST00000354241 KRTAP9-4Q9BYQ2 154 aa5.89□□□□□ -1.47
TRIM4-202ENST00000354241 KRTAP12-4P60329 112 aa5.89□□□□□ -1.47
TRIM4-202ENST00000354241 MT4P47944 62 aa5.87□□□□□ -1.47
TRIM4-202ENST00000354241 KRTAP4-9Q9BYQ8 210 aa5.81□□□□□ -1.48
TRIM4-202ENST00000354241 LCE1DQ5T752 114 aa5.74□□□□□ -1.49
TRIM4-202ENST00000354241 KRTAP6-2Q3LI66 62 aa5.69□□□□□ -1.5
TRIM4-202ENST00000354241 KRTAP20-2Q3LI61 65 aa5.66□□□□□ -1.5
TRIM4-202ENST00000354241 MT3P25713 68 aa5.62□□□□□ -1.51
TRIM4-202ENST00000354241 HMCN1Q96RW7 5635 aa5.6□□□□□ -1.51
TRIM4-202ENST00000354241 KRTAP5-2Q701N4 177 aa5.46□□□□□ -1.53
TRIM4-202ENST00000354241 KRTAP5-3Q6L8H2 238 aa5.44□□□□□ -1.54
TRIM4-202ENST00000354241 LCE3DQ9BYE3 92 aa5.41□□□□□ -1.54
TRIM4-202ENST00000354241 LCE3EQ5T5B0 92 aa5.26□□□□□ -1.57
TRIM4-202ENST00000354241 OBSCNQ5VST9 7968 aa5.12□□□□□ -1.59
TRIM4-202ENST00000354241 AHNAK2Q8IVF2 5795 aa4.99□□□□□ -1.61
TRIM4-202ENST00000354241 KRTAP9-9Q9BYP9 154 aa4.98□□□□□ -1.61
TRIM4-202ENST00000354241 KRTAP4-11Q9BYQ6 195 aa4.91□□□□□ -1.62
TRIM4-202ENST00000354241 LCE1EQ5T753 118 aa4.85□□□□□ -1.63
TRIM4-202ENST00000354241 KRTAP4-2Q9BYR5 136 aa4.84□□□□□ -1.63
TRIM4-202ENST00000354241 KRTAP5-10Q6L8G5 202 aa4.74□□□□□ -1.65
TRIM4-202ENST00000354241 KRTAP5-1Q6L8H4 278 aa4.74□□□□□ -1.65
TRIM4-202ENST00000354241 KRTAP5-8O75690 187 aa4.72□□□□□ -1.65
TRIM4-202ENST00000354241 PRM1P04553 51 aa4.7□□□□□ -1.66
TRIM4-202ENST00000354241 KRTAP4-12Q9BQ66 201 aa4.68□□□□□ -1.66
TRIM4-202ENST00000354241 LCE1BQ5T7P3 118 aa4.64□□□□□ -1.67
TRIM4-202ENST00000354241 GPR98Q8WXG9 6306 aa4.56□□□□□ -1.68
TRIM4-202ENST00000354241 KRTAP5-7Q6L8G8 165 aa4.54□□□□□ -1.68
TRIM4-202ENST00000354241 LCE1CQ5T751 118 aa4.53□□□□□ -1.68
TRIM4-202ENST00000354241 MUC5ACP98088 5654 aa4.52□□□□□ -1.69
TRIM4-202ENST00000354241 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.22□□□□□ -1.73
TRIM4-202ENST00000354241 KRTAP21-2Q3LI59 83 aa4.02□□□□□ -1.77
TRIM4-202ENST00000354241 MUC5BQ9HC84 5762 aaPredicted RBP4.01□□□□□ -1.77
TRIM4-202ENST00000354241 KRTAP5-11Q6L8G4 156 aa4□□□□□ -1.77
TRIM4-202ENST00000354241 AHNAKQ09666 5890 aaKnown RBP3.73□□□□□ -1.81
TRIM4-202ENST00000354241 KRTAP4-4Q9BYR3 166 aa3.63□□□□□ -1.83
TRIM4-202ENST00000354241 LCE1FQ5T754 118 aa3.6□□□□□ -1.83
TRIM4-202ENST00000354241 PHGR1C9JFL3 82 aa3.44□□□□□ -1.86
TRIM4-202ENST00000354241 MUC19Q7Z5P9 8384 aa3.04□□□□□ -1.92
TRIM4-202ENST00000354241 KRTAP21-1Q3LI58 79 aa3.02□□□□□ -1.93
TRIM4-202ENST00000354241 MUC16Q8WXI7 14507 aa2.23□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 99.9 ms