RNA–Protein interactions for RNA: ENST00000348795.8

SNCG-201, Transcript of synuclein gamma, humanhuman

TSL 2 BASIC

Gene SNCG, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCG-201ENST00000348795 MUC12Q9UKN1 5478 aa6.54□□□□□ -1.36
SNCG-201ENST00000348795 MT1LQ93083 61 aa6.54□□□□□ -1.36
SNCG-201ENST00000348795 KRTAP20-1Q3LI63 56 aa6.52□□□□□ -1.37
SNCG-201ENST00000348795 MT1GP13640 62 aa6.5□□□□□ -1.37
SNCG-201ENST00000348795 KRTAP19-3Q7Z4W3 81 aa6.49□□□□□ -1.37
SNCG-201ENST00000348795 LCE3CQ5T5A8 94 aa6.46□□□□□ -1.38
SNCG-201ENST00000348795 SPRR5A0A1B0GTR4 108 aa6.38□□□□□ -1.39
SNCG-201ENST00000348795 LCE5AQ5TCM9 118 aa6.38□□□□□ -1.39
SNCG-201ENST00000348795 MDN1Q9NU22 5596 aa6.37□□□□□ -1.39
SNCG-201ENST00000348795 LCE1AQ5T7P2 110 aa6.35□□□□□ -1.39
SNCG-201ENST00000348795 SPRR2EP22531 72 aa6.33□□□□□ -1.4
SNCG-201ENST00000348795 SPRR2BP35325 72 aa6.33□□□□□ -1.4
SNCG-201ENST00000348795 SPRR2AP35326 72 aa6.33□□□□□ -1.4
SNCG-201ENST00000348795 MT1MQ8N339 61 aa6.31□□□□□ -1.4
SNCG-201ENST00000348795 KRTAP2-3P0C7H8 128 aa6.28□□□□□ -1.4
SNCG-201ENST00000348795 KRTAP2-4Q9BYR9 128 aa6.28□□□□□ -1.4
SNCG-201ENST00000348795 LUZP6Q538Z0 58 aa6.27□□□□□ -1.41
SNCG-201ENST00000348795 KRTAP4-7Q9BYR0 210 aa6.17□□□□□ -1.42
SNCG-201ENST00000348795 SPRR2DP22532 72 aa6.12□□□□□ -1.43
SNCG-201ENST00000348795 KRTAP2-2Q9BYT5 123 aa6.06□□□□□ -1.44
SNCG-201ENST00000348795 KRTAP2-1Q9BYU5 128 aa6.06□□□□□ -1.44
SNCG-201ENST00000348795 KRTAP4-3Q9BYR4 195 aa6.02□□□□□ -1.45
SNCG-201ENST00000348795 KRTAP9-6A8MVA2 160 aa5.95□□□□□ -1.46
SNCG-201ENST00000348795 LCE3BQ5TA77 95 aa5.88□□□□□ -1.47
SNCG-201ENST00000348795 NDUFAF8A1L188 74 aa5.85□□□□□ -1.47
SNCG-201ENST00000348795 DSTQ03001 7570 aaKnown RBP5.82□□□□□ -1.48
SNCG-201ENST00000348795 LOC100996750A0A140TA64 210 aa5.8□□□□□ -1.48
SNCG-201ENST00000348795 H3BS24 57 aa5.79□□□□□ -1.48
SNCG-201ENST00000348795 KRTAP5-5Q701N2 237 aaPredicted RBP5.69□□□□□ -1.5
SNCG-201ENST00000348795 GPR98Q8WXG9 6306 aa5.66□□□□□ -1.5
SNCG-201ENST00000348795 MT1AP04731 61 aa5.62□□□□□ -1.51
SNCG-201ENST00000348795 LCE4AQ5TA78 99 aa5.53□□□□□ -1.52
SNCG-201ENST00000348795 KRTAP5-4Q6L8H1 288 aa5.52□□□□□ -1.53
SNCG-201ENST00000348795 KRTAP4-9Q9BYQ8 210 aa5.5□□□□□ -1.53
SNCG-201ENST00000348795 KRTAP6-1Q3LI64 71 aa5.46□□□□□ -1.54
SNCG-201ENST00000348795 KRTAP12-4P60329 112 aa5.44□□□□□ -1.54
SNCG-201ENST00000348795 A0A0A0MQY5 61 aa5.35□□□□□ -1.55
SNCG-201ENST00000348795 KRTAP9-4Q9BYQ2 154 aa5.35□□□□□ -1.55
SNCG-201ENST00000348795 LCE1DQ5T752 114 aa5.33□□□□□ -1.56
SNCG-201ENST00000348795 SYNE1Q8NF91 8797 aaKnown RBP5.31□□□□□ -1.56
SNCG-201ENST00000348795 MT4P47944 62 aa5.25□□□□□ -1.57
SNCG-201ENST00000348795 HMCN1Q96RW7 5635 aa5.25□□□□□ -1.57
SNCG-201ENST00000348795 AHNAK2Q8IVF2 5795 aa5.15□□□□□ -1.58
SNCG-201ENST00000348795 MT3P25713 68 aa5.15□□□□□ -1.59
SNCG-201ENST00000348795 KRTAP4-6Q9BYQ5 205 aa5.15□□□□□ -1.59
SNCG-201ENST00000348795 KRTAP20-2Q3LI61 65 aa5.14□□□□□ -1.59
SNCG-201ENST00000348795 KRTAP5-10Q6L8G5 202 aa5.08□□□□□ -1.6
SNCG-201ENST00000348795 KRTAP6-2Q3LI66 62 aa5.07□□□□□ -1.6
SNCG-201ENST00000348795 INE1O15225 51 aa5.02□□□□□ -1.61
SNCG-201ENST00000348795 KRTAP5-2Q701N4 177 aa4.99□□□□□ -1.61
SNCG-201ENST00000348795 KRTAP5-3Q6L8H2 238 aa4.94□□□□□ -1.62
SNCG-201ENST00000348795 KRTAP5-7Q6L8G8 165 aa4.93□□□□□ -1.62
SNCG-201ENST00000348795 LCE3DQ9BYE3 92 aa4.87□□□□□ -1.63
SNCG-201ENST00000348795 LCE3EQ5T5B0 92 aa4.74□□□□□ -1.65
SNCG-201ENST00000348795 OBSCNQ5VST9 7968 aa4.54□□□□□ -1.68
SNCG-201ENST00000348795 LCE1EQ5T753 118 aa4.54□□□□□ -1.68
SNCG-201ENST00000348795 KRTAP4-11Q9BYQ6 195 aa4.49□□□□□ -1.69
SNCG-201ENST00000348795 AHNAKQ09666 5890 aaKnown RBP4.35□□□□□ -1.71
SNCG-201ENST00000348795 KRTAP5-8O75690 187 aa4.33□□□□□ -1.72
SNCG-201ENST00000348795 MUC5ACP98088 5654 aa4.33□□□□□ -1.72
SNCG-201ENST00000348795 KRTAP5-1Q6L8H4 278 aa4.29□□□□□ -1.72
SNCG-201ENST00000348795 MUC5BQ9HC84 5762 aaPredicted RBP4.28□□□□□ -1.72
SNCG-201ENST00000348795 KRTAP9-9Q9BYP9 154 aa4.2□□□□□ -1.74
SNCG-201ENST00000348795 LCE1CQ5T751 118 aa4.18□□□□□ -1.74
SNCG-201ENST00000348795 LCE1BQ5T7P3 118 aa4.18□□□□□ -1.74
SNCG-201ENST00000348795 KRTAP4-2Q9BYR5 136 aa4.08□□□□□ -1.76
SNCG-201ENST00000348795 PRM1P04553 51 aa4□□□□□ -1.77
SNCG-201ENST00000348795 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.92□□□□□ -1.78
SNCG-201ENST00000348795 KRTAP5-11Q6L8G4 156 aa3.7□□□□□ -1.82
SNCG-201ENST00000348795 KRTAP21-2Q3LI59 83 aa3.6□□□□□ -1.83
SNCG-201ENST00000348795 LCE1FQ5T754 118 aa3.46□□□□□ -1.86
SNCG-201ENST00000348795 KRTAP4-12Q9BQ66 201 aa3.35□□□□□ -1.87
SNCG-201ENST00000348795 PHGR1C9JFL3 82 aa3.14□□□□□ -1.91
SNCG-201ENST00000348795 KRTAP4-4Q9BYR3 166 aa3.09□□□□□ -1.91
SNCG-201ENST00000348795 MUC19Q7Z5P9 8384 aa2.67□□□□□ -1.98
SNCG-201ENST00000348795 KRTAP21-1Q3LI58 79 aa2.46□□□□□ -2.02
SNCG-201ENST00000348795 MUC16Q8WXI7 14507 aa2.06□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 80.3 ms