RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 LCE3EQ5T5B0 92 aa5.95□□□□□ -1.46
UBE3C-201ENST00000348165 KRTAP9-2Q9BYQ4 174 aa5.94□□□□□ -1.46
UBE3C-201ENST00000348165 KRTAP19-6Q3LI70 58 aa5.94□□□□□ -1.46
UBE3C-201ENST00000348165 LCE2DQ5TA82 110 aaPredicted RBP5.91□□□□□ -1.46
UBE3C-201ENST00000348165 MT1MQ8N339 61 aa5.89□□□□□ -1.47
UBE3C-201ENST00000348165 MUC2Q02817 5179 aa5.85□□□□□ -1.47
UBE3C-201ENST00000348165 LCE2AQ5TA79 106 aaPredicted RBP5.84□□□□□ -1.48
UBE3C-201ENST00000348165 KRTAP4-3Q9BYR4 195 aa5.82□□□□□ -1.48
UBE3C-201ENST00000348165 LOC100996750A0A140TA64 210 aa5.81□□□□□ -1.48
UBE3C-201ENST00000348165 HMCN2Q8NDA2 5059 aa5.79□□□□□ -1.48
UBE3C-201ENST00000348165 MT4P47944 62 aa5.78□□□□□ -1.48
UBE3C-201ENST00000348165 MT3P25713 68 aa5.7□□□□□ -1.5
UBE3C-201ENST00000348165 KRTAP19-7Q3SYF9 63 aa5.68□□□□□ -1.5
UBE3C-201ENST00000348165 PRM1P04553 51 aa5.65□□□□□ -1.5
UBE3C-201ENST00000348165 KRTAP9-6A0A140TA67 174 aa5.56□□□□□ -1.52
UBE3C-201ENST00000348165 OBSCNQ5VST9 7968 aa5.56□□□□□ -1.52
UBE3C-201ENST00000348165 SYNE2Q8WXH0 6885 aaKnown RBP5.51□□□□□ -1.53
UBE3C-201ENST00000348165 LCE1BQ5T7P3 118 aa5.48□□□□□ -1.53
UBE3C-201ENST00000348165 LCE1DQ5T752 114 aa5.47□□□□□ -1.53
UBE3C-201ENST00000348165 MT1AP04731 61 aa5.43□□□□□ -1.54
UBE3C-201ENST00000348165 KRTAP4-9Q9BYQ8 210 aa5.39□□□□□ -1.55
UBE3C-201ENST00000348165 KRTAP2-3P0C7H8 128 aa5.37□□□□□ -1.55
UBE3C-201ENST00000348165 KRTAP2-4Q9BYR9 128 aa5.37□□□□□ -1.55
UBE3C-201ENST00000348165 KRTAP2-1Q9BYU5 128 aa5.37□□□□□ -1.55
UBE3C-201ENST00000348165 KRTAP9-7A8MTY7 169 aa5.3□□□□□ -1.56
UBE3C-201ENST00000348165 FCGBPQ9Y6R7 5405 aaPredicted RBP5.27□□□□□ -1.57
UBE3C-201ENST00000348165 USH2AO75445 5202 aa5.24□□□□□ -1.57
UBE3C-201ENST00000348165 DSTQ03001 7570 aaKnown RBP5.23□□□□□ -1.57
UBE3C-201ENST00000348165 LCE1AQ5T7P2 110 aa5.23□□□□□ -1.57
UBE3C-201ENST00000348165 KRTAP20-1Q3LI63 56 aa5.22□□□□□ -1.57
UBE3C-201ENST00000348165 KRTAP6-3Q3LI67 103 aa5.21□□□□□ -1.58
UBE3C-201ENST00000348165 KRTAP9-6A8MVA2 160 aa5.2□□□□□ -1.58
UBE3C-201ENST00000348165 KRTAP6-1Q3LI64 71 aa5.16□□□□□ -1.58
UBE3C-201ENST00000348165 LCE5AQ5TCM9 118 aa5.15□□□□□ -1.58
UBE3C-201ENST00000348165 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.14□□□□□ -1.59
UBE3C-201ENST00000348165 KRTAP6-2Q3LI66 62 aa5.09□□□□□ -1.59
UBE3C-201ENST00000348165 MACF1Q9UPN3 7388 aaKnown RBP5.07□□□□□ -1.6
UBE3C-201ENST00000348165 KRTAP9-4Q9BYQ2 154 aa4.99□□□□□ -1.61
UBE3C-201ENST00000348165 KMT2DO14686 5537 aa4.97□□□□□ -1.61
UBE3C-201ENST00000348165 KRTAP2-2Q9BYT5 123 aa4.92□□□□□ -1.62
UBE3C-201ENST00000348165 LCE4AQ5TA78 99 aa4.92□□□□□ -1.62
UBE3C-201ENST00000348165 MUC12Q9UKN1 5478 aa4.66□□□□□ -1.66
UBE3C-201ENST00000348165 MDN1Q9NU22 5596 aa4.64□□□□□ -1.67
UBE3C-201ENST00000348165 SSPOA2VEC9 5147 aa4.6□□□□□ -1.67
UBE3C-201ENST00000348165 LCE1CQ5T751 118 aa4.6□□□□□ -1.67
UBE3C-201ENST00000348165 LCE1EQ5T753 118 aa4.6□□□□□ -1.67
UBE3C-201ENST00000348165 LCE1FQ5T754 118 aa4.6□□□□□ -1.67
UBE3C-201ENST00000348165 NEBP20929 6669 aa4.59□□□□□ -1.67
UBE3C-201ENST00000348165 MUC19Q7Z5P9 8384 aa4.53□□□□□ -1.68
UBE3C-201ENST00000348165 KRTAP5-9P26371 169 aa4.49□□□□□ -1.69
UBE3C-201ENST00000348165 KRTAP4-6Q9BYQ5 205 aa4.39□□□□□ -1.71
UBE3C-201ENST00000348165 GPR98Q8WXG9 6306 aa4.3□□□□□ -1.72
UBE3C-201ENST00000348165 KRTAP9-9Q9BYP9 154 aa4.29□□□□□ -1.72
UBE3C-201ENST00000348165 KRTAP20-2Q3LI61 65 aa4.24□□□□□ -1.73
UBE3C-201ENST00000348165 KRTAP4-11Q9BYQ6 195 aa4.13□□□□□ -1.75
UBE3C-201ENST00000348165 KRTAP4-4Q9BYR3 166 aa3.89□□□□□ -1.79
UBE3C-201ENST00000348165 KRTAP4-12Q9BQ66 201 aa3.88□□□□□ -1.79
UBE3C-201ENST00000348165 KRTAP4-2Q9BYR5 136 aa3.88□□□□□ -1.79
UBE3C-201ENST00000348165 KRTAP5-4Q6L8H1 288 aa3.86□□□□□ -1.79
UBE3C-201ENST00000348165 KRTAP5-5Q701N2 237 aaPredicted RBP3.86□□□□□ -1.79
UBE3C-201ENST00000348165 MUC5ACP98088 5654 aa3.8□□□□□ -1.8
UBE3C-201ENST00000348165 HMCN1Q96RW7 5635 aa3.69□□□□□ -1.82
UBE3C-201ENST00000348165 AHNAK2Q8IVF2 5795 aa3.5□□□□□ -1.85
UBE3C-201ENST00000348165 KRTAP5-3Q6L8H2 238 aa3.5□□□□□ -1.85
UBE3C-201ENST00000348165 KRTAP5-8O75690 187 aa3.23□□□□□ -1.89
UBE3C-201ENST00000348165 KRTAP5-2Q701N4 177 aa3.07□□□□□ -1.92
UBE3C-201ENST00000348165 KRTAP5-10Q6L8G5 202 aa3.05□□□□□ -1.92
UBE3C-201ENST00000348165 AHNAKQ09666 5890 aaKnown RBP2.98□□□□□ -1.93
UBE3C-201ENST00000348165 MUC5BQ9HC84 5762 aaPredicted RBP2.93□□□□□ -1.94
UBE3C-201ENST00000348165 PHGR1C9JFL3 82 aa2.83□□□□□ -1.96
UBE3C-201ENST00000348165 KRTAP5-11Q6L8G4 156 aa2.75□□□□□ -1.97
UBE3C-201ENST00000348165 KRTAP5-1Q6L8H4 278 aa2.75□□□□□ -1.97
UBE3C-201ENST00000348165 KRTAP21-2Q3LI59 83 aa2.64□□□□□ -1.99
UBE3C-201ENST00000348165 KRTAP21-1Q3LI58 79 aa2.53□□□□□ -2
UBE3C-201ENST00000348165 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.39□□□□□ -2.03
UBE3C-201ENST00000348165 KRTAP5-7Q6L8G8 165 aa2.22□□□□□ -2.05
UBE3C-201ENST00000348165 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 79.1 ms