RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 KRTAP9-6A0A140TA67 174 aa3.76□□□□□ -1.81
TRAF3-201ENST00000347662 LCE5AQ5TCM9 118 aa3.75□□□□□ -1.81
TRAF3-201ENST00000347662 MT1EP04732 61 aa3.72□□□□□ -1.81
TRAF3-201ENST00000347662 MT1LQ93083 61 aa3.72□□□□□ -1.81
TRAF3-201ENST00000347662 MT3P25713 68 aa3.72□□□□□ -1.81
TRAF3-201ENST00000347662 KRTAP19-6Q3LI70 58 aa3.7□□□□□ -1.82
TRAF3-201ENST00000347662 MUC17Q685J3 4493 aa3.69□□□□□ -1.82
TRAF3-201ENST00000347662 UBR4Q5T4S7 5183 aa3.68□□□□□ -1.82
TRAF3-201ENST00000347662 LCE2AQ5TA79 106 aaPredicted RBP3.67□□□□□ -1.82
TRAF3-201ENST00000347662 SYNE2Q8WXH0 6885 aaKnown RBP3.65□□□□□ -1.83
TRAF3-201ENST00000347662 KRTAP4-3Q9BYR4 195 aa3.64□□□□□ -1.83
TRAF3-201ENST00000347662 LOC100996750A0A140TA64 210 aa3.62□□□□□ -1.83
TRAF3-201ENST00000347662 LCE1CQ5T751 118 aa3.62□□□□□ -1.83
TRAF3-201ENST00000347662 LCE1EQ5T753 118 aa3.62□□□□□ -1.83
TRAF3-201ENST00000347662 LCE1FQ5T754 118 aa3.62□□□□□ -1.83
TRAF3-201ENST00000347662 LCE1AQ5T7P2 110 aa3.62□□□□□ -1.83
TRAF3-201ENST00000347662 MT1MQ8N339 61 aa3.62□□□□□ -1.83
TRAF3-201ENST00000347662 MUC2Q02817 5179 aa3.59□□□□□ -1.83
TRAF3-201ENST00000347662 HMCN2Q8NDA2 5059 aa3.59□□□□□ -1.83
TRAF3-201ENST00000347662 FAT4Q6V0I7 4981 aa3.58□□□□□ -1.84
TRAF3-201ENST00000347662 KRTAP9-7A8MTY7 169 aa3.57□□□□□ -1.84
TRAF3-201ENST00000347662 ABCA13Q86UQ4 5058 aa3.57□□□□□ -1.84
TRAF3-201ENST00000347662 KRTAP20-1Q3LI63 56 aa3.49□□□□□ -1.85
TRAF3-201ENST00000347662 RNF213Q63HN8 5207 aa3.45□□□□□ -1.86
TRAF3-201ENST00000347662 KRTAP19-7Q3SYF9 63 aa3.42□□□□□ -1.86
TRAF3-201ENST00000347662 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.4□□□□□ -1.86
TRAF3-201ENST00000347662 KRTAP4-9Q9BYQ8 210 aa3.4□□□□□ -1.87
TRAF3-201ENST00000347662 LCE4AQ5TA78 99 aa3.36□□□□□ -1.87
TRAF3-201ENST00000347662 OBSCNQ5VST9 7968 aa3.36□□□□□ -1.87
TRAF3-201ENST00000347662 DSTQ03001 7570 aaKnown RBP3.34□□□□□ -1.88
TRAF3-201ENST00000347662 KRTAP6-3Q3LI67 103 aa3.33□□□□□ -1.88
TRAF3-201ENST00000347662 KRTAP2-3P0C7H8 128 aa3.31□□□□□ -1.88
TRAF3-201ENST00000347662 KRTAP2-4Q9BYR9 128 aa3.31□□□□□ -1.88
TRAF3-201ENST00000347662 MT1AP04731 61 aa3.27□□□□□ -1.89
TRAF3-201ENST00000347662 KRTAP2-1Q9BYU5 128 aa3.24□□□□□ -1.89
TRAF3-201ENST00000347662 FCGBPQ9Y6R7 5405 aaPredicted RBP3.22□□□□□ -1.89
TRAF3-201ENST00000347662 KRTAP2-2Q9BYT5 123 aa3.21□□□□□ -1.9
TRAF3-201ENST00000347662 KRTAP6-2Q3LI66 62 aa3.2□□□□□ -1.9
TRAF3-201ENST00000347662 MACF1Q9UPN3 7388 aaKnown RBP3.18□□□□□ -1.9
TRAF3-201ENST00000347662 KRTAP6-1Q3LI64 71 aa3.17□□□□□ -1.9
TRAF3-201ENST00000347662 KMT2DO14686 5537 aa3.13□□□□□ -1.91
TRAF3-201ENST00000347662 KRTAP9-6A8MVA2 160 aa3.07□□□□□ -1.92
TRAF3-201ENST00000347662 KRTAP9-9Q9BYP9 154 aa3.05□□□□□ -1.92
TRAF3-201ENST00000347662 KRTAP9-4Q9BYQ2 154 aa3.05□□□□□ -1.92
TRAF3-201ENST00000347662 USH2AO75445 5202 aa3.02□□□□□ -1.93
TRAF3-201ENST00000347662 KRTAP20-2Q3LI61 65 aa2.94□□□□□ -1.94
TRAF3-201ENST00000347662 MUC12Q9UKN1 5478 aa2.86□□□□□ -1.95
TRAF3-201ENST00000347662 KRTAP4-11Q9BYQ6 195 aa2.84□□□□□ -1.95
TRAF3-201ENST00000347662 KRTAP4-6Q9BYQ5 205 aa2.83□□□□□ -1.96
TRAF3-201ENST00000347662 NEBP20929 6669 aa2.83□□□□□ -1.96
TRAF3-201ENST00000347662 KRTAP5-9P26371 169 aa2.79□□□□□ -1.96
TRAF3-201ENST00000347662 MDN1Q9NU22 5596 aa2.75□□□□□ -1.97
TRAF3-201ENST00000347662 SSPOA2VEC9 5147 aa2.74□□□□□ -1.97
TRAF3-201ENST00000347662 MUC19Q7Z5P9 8384 aa2.72□□□□□ -1.97
TRAF3-201ENST00000347662 KRTAP4-4Q9BYR3 166 aa2.7□□□□□ -1.98
TRAF3-201ENST00000347662 KRTAP4-12Q9BQ66 201 aa2.64□□□□□ -1.99
TRAF3-201ENST00000347662 KRTAP4-2Q9BYR5 136 aa2.64□□□□□ -1.99
TRAF3-201ENST00000347662 GPR98Q8WXG9 6306 aa2.57□□□□□ -2
TRAF3-201ENST00000347662 KRTAP5-4Q6L8H1 288 aa2.42□□□□□ -2.02
TRAF3-201ENST00000347662 MUC5ACP98088 5654 aa2.32□□□□□ -2.04
TRAF3-201ENST00000347662 KRTAP5-3Q6L8H2 238 aa2.29□□□□□ -2.04
TRAF3-201ENST00000347662 KRTAP5-5Q701N2 237 aaPredicted RBP2.24□□□□□ -2.05
TRAF3-201ENST00000347662 HMCN1Q96RW7 5635 aa2.12□□□□□ -2.07
TRAF3-201ENST00000347662 KRTAP5-8O75690 187 aa2.1□□□□□ -2.07
TRAF3-201ENST00000347662 PHGR1C9JFL3 82 aa2.05□□□□□ -2.08
TRAF3-201ENST00000347662 AHNAK2Q8IVF2 5795 aa1.91□□□□□ -2.1
TRAF3-201ENST00000347662 KRTAP5-2Q701N4 177 aa1.84□□□□□ -2.12
TRAF3-201ENST00000347662 KRTAP5-10Q6L8G5 202 aa1.78□□□□□ -2.12
TRAF3-201ENST00000347662 MUC5BQ9HC84 5762 aaPredicted RBP1.78□□□□□ -2.12
TRAF3-201ENST00000347662 AHNAKQ09666 5890 aaKnown RBP1.77□□□□□ -2.13
TRAF3-201ENST00000347662 KRTAP5-1Q6L8H4 278 aa1.69□□□□□ -2.14
TRAF3-201ENST00000347662 KRTAP5-11Q6L8G4 156 aa1.66□□□□□ -2.14
TRAF3-201ENST00000347662 KRTAP21-2Q3LI59 83 aa1.57□□□□□ -2.16
TRAF3-201ENST00000347662 KRTAP5-7Q6L8G8 165 aa1.49□□□□□ -2.17
TRAF3-201ENST00000347662 KRTAP21-1Q3LI58 79 aa1.48□□□□□ -2.17
TRAF3-201ENST00000347662 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.42□□□□□ -2.18
TRAF3-201ENST00000347662 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 179.8 ms