RNA–Protein interactions for RNA: ENST00000345254.8

SEC24C-202, Transcript of SEC24 homolog C, COPII coat complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC24C, Length 4,433 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24C-202ENST00000345254 KRTAP19-5Q3LI72 72 aa3.52□□□□□ -1.85
SEC24C-202ENST00000345254 LCE3CQ5T5A8 94 aa3.5□□□□□ -1.85
SEC24C-202ENST00000345254 KMT2DO14686 5537 aa3.46□□□□□ -1.85
SEC24C-202ENST00000345254 KRTAP20-1Q3LI63 56 aa3.44□□□□□ -1.86
SEC24C-202ENST00000345254 USH2AO75445 5202 aa3.41□□□□□ -1.86
SEC24C-202ENST00000345254 KRTAP6-3Q3LI67 103 aa3.39□□□□□ -1.87
SEC24C-202ENST00000345254 DSTQ03001 7570 aaKnown RBP3.39□□□□□ -1.87
SEC24C-202ENST00000345254 MACF1Q9UPN3 7388 aaKnown RBP3.37□□□□□ -1.87
SEC24C-202ENST00000345254 OBSCNQ5VST9 7968 aa3.36□□□□□ -1.87
SEC24C-202ENST00000345254 LCE3BQ5TA77 95 aa3.34□□□□□ -1.87
SEC24C-202ENST00000345254 MT1GP13640 62 aa3.34□□□□□ -1.88
SEC24C-202ENST00000345254 KRTAP12-4P60329 112 aa3.31□□□□□ -1.88
SEC24C-202ENST00000345254 MT4P47944 62 aa3.3□□□□□ -1.88
SEC24C-202ENST00000345254 KRTAP19-3Q7Z4W3 81 aa3.29□□□□□ -1.88
SEC24C-202ENST00000345254 FCGBPQ9Y6R7 5405 aaPredicted RBP3.27□□□□□ -1.89
SEC24C-202ENST00000345254 KRTAP2-3P0C7H8 128 aa3.27□□□□□ -1.89
SEC24C-202ENST00000345254 KRTAP2-4Q9BYR9 128 aa3.27□□□□□ -1.89
SEC24C-202ENST00000345254 SSPOA2VEC9 5147 aa3.21□□□□□ -1.9
SEC24C-202ENST00000345254 MT1EP04732 61 aa3.19□□□□□ -1.9
SEC24C-202ENST00000345254 KRTAP2-2Q9BYT5 123 aa3.17□□□□□ -1.9
SEC24C-202ENST00000345254 KRTAP2-1Q9BYU5 128 aa3.17□□□□□ -1.9
SEC24C-202ENST00000345254 NEBP20929 6669 aa3.14□□□□□ -1.91
SEC24C-202ENST00000345254 KRTAP4-7Q9BYR0 210 aa3.13□□□□□ -1.91
SEC24C-202ENST00000345254 MT1LQ93083 61 aa3.13□□□□□ -1.91
SEC24C-202ENST00000345254 MDN1Q9NU22 5596 aa3.12□□□□□ -1.91
SEC24C-202ENST00000345254 KRTAP4-9Q9BYQ8 210 aa3.12□□□□□ -1.91
SEC24C-202ENST00000345254 LCE1AQ5T7P2 110 aa3.11□□□□□ -1.91
SEC24C-202ENST00000345254 MT1MQ8N339 61 aa3.11□□□□□ -1.91
SEC24C-202ENST00000345254 KRTAP4-3Q9BYR4 195 aa3.08□□□□□ -1.92
SEC24C-202ENST00000345254 MUC12Q9UKN1 5478 aa3.04□□□□□ -1.92
SEC24C-202ENST00000345254 KRTAP19-7Q3SYF9 63 aa3.03□□□□□ -1.92
SEC24C-202ENST00000345254 GPR98Q8WXG9 6306 aa3.02□□□□□ -1.93
SEC24C-202ENST00000345254 KRTAP9-6A8MVA2 160 aa2.94□□□□□ -1.94
SEC24C-202ENST00000345254 LOC100996750A0A140TA64 210 aa2.94□□□□□ -1.94
SEC24C-202ENST00000345254 KRTAP5-9P26371 169 aa2.92□□□□□ -1.94
SEC24C-202ENST00000345254 LCE5AQ5TCM9 118 aa2.9□□□□□ -1.94
SEC24C-202ENST00000345254 LCE3DQ9BYE3 92 aa2.9□□□□□ -1.95
SEC24C-202ENST00000345254 LCE4AQ5TA78 99 aa2.89□□□□□ -1.95
SEC24C-202ENST00000345254 LCE3EQ5T5B0 92 aa2.88□□□□□ -1.95
SEC24C-202ENST00000345254 MT3P25713 68 aa2.84□□□□□ -1.95
SEC24C-202ENST00000345254 LCE1DQ5T752 114 aa2.83□□□□□ -1.96
SEC24C-202ENST00000345254 LCE1BQ5T7P3 118 aa2.79□□□□□ -1.96
SEC24C-202ENST00000345254 MT1AP04731 61 aa2.75□□□□□ -1.97
SEC24C-202ENST00000345254 PRM1P04553 51 aa2.69□□□□□ -1.98
SEC24C-202ENST00000345254 KRTAP4-6Q9BYQ5 205 aa2.67□□□□□ -1.98
SEC24C-202ENST00000345254 KRTAP6-2Q3LI66 62 aa2.67□□□□□ -1.98
SEC24C-202ENST00000345254 KRTAP6-1Q3LI64 71 aa2.66□□□□□ -1.98
SEC24C-202ENST00000345254 KRTAP9-4Q9BYQ2 154 aa2.56□□□□□ -2
SEC24C-202ENST00000345254 KRTAP9-9Q9BYP9 154 aa2.55□□□□□ -2
SEC24C-202ENST00000345254 KRTAP20-2Q3LI61 65 aa2.53□□□□□ -2
SEC24C-202ENST00000345254 MUC19Q7Z5P9 8384 aa2.49□□□□□ -2.01
SEC24C-202ENST00000345254 KRTAP5-3Q6L8H2 238 aa2.4□□□□□ -2.02
SEC24C-202ENST00000345254 LCE1CQ5T751 118 aa2.39□□□□□ -2.03
SEC24C-202ENST00000345254 LCE1EQ5T753 118 aa2.39□□□□□ -2.03
SEC24C-202ENST00000345254 LCE1FQ5T754 118 aa2.39□□□□□ -2.03
SEC24C-202ENST00000345254 KRTAP4-11Q9BYQ6 195 aa2.38□□□□□ -2.03
SEC24C-202ENST00000345254 KRTAP5-4Q6L8H1 288 aa2.37□□□□□ -2.03
SEC24C-202ENST00000345254 MUC5ACP98088 5654 aa2.34□□□□□ -2.04
SEC24C-202ENST00000345254 HMCN1Q96RW7 5635 aa2.34□□□□□ -2.04
SEC24C-202ENST00000345254 AHNAK2Q8IVF2 5795 aa2.31□□□□□ -2.04
SEC24C-202ENST00000345254 KRTAP5-5Q701N2 237 aaPredicted RBP2.29□□□□□ -2.04
SEC24C-202ENST00000345254 KRTAP4-12Q9BQ66 201 aa2.18□□□□□ -2.06
SEC24C-202ENST00000345254 KRTAP4-2Q9BYR5 136 aa2.18□□□□□ -2.06
SEC24C-202ENST00000345254 KRTAP5-8O75690 187 aa2.14□□□□□ -2.07
SEC24C-202ENST00000345254 AHNAKQ09666 5890 aaKnown RBP2.04□□□□□ -2.08
SEC24C-202ENST00000345254 KRTAP5-10Q6L8G5 202 aa2□□□□□ -2.09
SEC24C-202ENST00000345254 KRTAP4-4Q9BYR3 166 aa1.99□□□□□ -2.09
SEC24C-202ENST00000345254 KRTAP5-7Q6L8G8 165 aa1.93□□□□□ -2.1
SEC24C-202ENST00000345254 KRTAP5-2Q701N4 177 aa1.9□□□□□ -2.1
SEC24C-202ENST00000345254 MUC5BQ9HC84 5762 aaPredicted RBP1.87□□□□□ -2.11
SEC24C-202ENST00000345254 PHGR1C9JFL3 82 aa1.79□□□□□ -2.12
SEC24C-202ENST00000345254 KRTAP5-1Q6L8H4 278 aa1.77□□□□□ -2.13
SEC24C-202ENST00000345254 KRTAP5-11Q6L8G4 156 aa1.59□□□□□ -2.15
SEC24C-202ENST00000345254 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.54□□□□□ -2.16
SEC24C-202ENST00000345254 KRTAP21-2Q3LI59 83 aa1.52□□□□□ -2.17
SEC24C-202ENST00000345254 KRTAP21-1Q3LI58 79 aa1.5□□□□□ -2.17
SEC24C-202ENST00000345254 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 10.8 ms