RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 C10orf95Q9H7T3 257 aa5.69□□□□□ -1.5
HERPUD1-202ENST00000344114 KRTAP25-1Q3LHN0 102 aa5.66□□□□□ -1.5
HERPUD1-202ENST00000344114 SPRR2EP22531 72 aa5.6□□□□□ -1.51
HERPUD1-202ENST00000344114 SPRR2BP35325 72 aa5.6□□□□□ -1.51
HERPUD1-202ENST00000344114 SPRR2AP35326 72 aa5.6□□□□□ -1.51
HERPUD1-202ENST00000344114 SPRR2FQ96RM1 72 aa5.58□□□□□ -1.52
HERPUD1-202ENST00000344114 KRTAP2-2Q9BYT5 123 aa5.58□□□□□ -1.52
HERPUD1-202ENST00000344114 KRTAP2-1Q9BYU5 128 aa5.58□□□□□ -1.52
HERPUD1-202ENST00000344114 KRTAP4-11Q9BYQ6 195 aa5.55□□□□□ -1.52
HERPUD1-202ENST00000344114 TNP1P09430 55 aa5.54□□□□□ -1.52
HERPUD1-202ENST00000344114 LCE4AQ5TA78 99 aa5.54□□□□□ -1.52
HERPUD1-202ENST00000344114 A0A0A0MQY5 61 aa5.53□□□□□ -1.52
HERPUD1-202ENST00000344114 MT1XP80297 61 aa5.5□□□□□ -1.53
HERPUD1-202ENST00000344114 LCE1AQ5T7P2 110 aa5.49□□□□□ -1.53
HERPUD1-202ENST00000344114 PRO2289Q9P1D8 64 aa5.49□□□□□ -1.53
HERPUD1-202ENST00000344114 PP632Q6XCG6 107 aa5.46□□□□□ -1.54
HERPUD1-202ENST00000344114 KRTAP8-1Q8IUC2 63 aa5.43□□□□□ -1.54
HERPUD1-202ENST00000344114 SPRR2DP22532 72 aa5.42□□□□□ -1.54
HERPUD1-202ENST00000344114 KRTAP5-3Q6L8H2 238 aa5.32□□□□□ -1.56
HERPUD1-202ENST00000344114 KRTAP10-12P60413 245 aa5.29□□□□□ -1.56
HERPUD1-202ENST00000344114 LCE5AQ5TCM9 118 aa5.29□□□□□ -1.56
HERPUD1-202ENST00000344114 KRTAP10-7P60409 375 aaPredicted RBP5.27□□□□□ -1.57
HERPUD1-202ENST00000344114 LCE3AQ5TA76 89 aa5.26□□□□□ -1.57
HERPUD1-202ENST00000344114 GPR98Q8WXG9 6306 aa5.13□□□□□ -1.59
HERPUD1-202ENST00000344114 KRTAP15-1Q3LI76 137 aa5.13□□□□□ -1.59
HERPUD1-202ENST00000344114 KRTAP12-3P60328 96 aa5.05□□□□□ -1.6
HERPUD1-202ENST00000344114 DSTQ03001 7570 aaKnown RBP5.03□□□□□ -1.6
HERPUD1-202ENST00000344114 KRTAP19-5Q3LI72 72 aa4.98□□□□□ -1.61
HERPUD1-202ENST00000344114 KRTAP19-7Q3SYF9 63 aa4.91□□□□□ -1.62
HERPUD1-202ENST00000344114 SPRR5A0A1B0GTR4 108 aa4.85□□□□□ -1.63
HERPUD1-202ENST00000344114 KRTAP19-3Q7Z4W3 81 aa4.84□□□□□ -1.63
HERPUD1-202ENST00000344114 MT1EP04732 61 aa4.82□□□□□ -1.64
HERPUD1-202ENST00000344114 KRTAP5-10Q6L8G5 202 aa4.78□□□□□ -1.64
HERPUD1-202ENST00000344114 HMCN1Q96RW7 5635 aa4.77□□□□□ -1.65
HERPUD1-202ENST00000344114 MT4P47944 62 aa4.76□□□□□ -1.65
HERPUD1-202ENST00000344114 MT1LQ93083 61 aa4.75□□□□□ -1.65
HERPUD1-202ENST00000344114 LCE3CQ5T5A8 94 aa4.73□□□□□ -1.65
HERPUD1-202ENST00000344114 LUZP6Q538Z0 58 aa4.72□□□□□ -1.65
HERPUD1-202ENST00000344114 AHNAK2Q8IVF2 5795 aa4.7□□□□□ -1.66
HERPUD1-202ENST00000344114 MT1GP13640 62 aa4.67□□□□□ -1.66
HERPUD1-202ENST00000344114 KRTAP5-7Q6L8G8 165 aa4.65□□□□□ -1.67
HERPUD1-202ENST00000344114 KRTAP5-4Q6L8H1 288 aa4.65□□□□□ -1.67
HERPUD1-202ENST00000344114 NDUFAF8A1L188 74 aa4.63□□□□□ -1.67
HERPUD1-202ENST00000344114 MT1MQ8N339 61 aa4.6□□□□□ -1.67
HERPUD1-202ENST00000344114 KRTAP4-3Q9BYR4 195 aa4.49□□□□□ -1.69
HERPUD1-202ENST00000344114 KRTAP9-6A8MVA2 160 aa4.44□□□□□ -1.7
HERPUD1-202ENST00000344114 KRTAP20-2Q3LI61 65 aa4.4□□□□□ -1.71
HERPUD1-202ENST00000344114 KRTAP5-5Q701N2 237 aaPredicted RBP4.27□□□□□ -1.73
HERPUD1-202ENST00000344114 KRTAP12-4P60329 112 aa4.22□□□□□ -1.73
HERPUD1-202ENST00000344114 SYNE1Q8NF91 8797 aaKnown RBP4.14□□□□□ -1.75
HERPUD1-202ENST00000344114 MT3P25713 68 aa4.08□□□□□ -1.76
HERPUD1-202ENST00000344114 MT1AP04731 61 aa4.05□□□□□ -1.76
HERPUD1-202ENST00000344114 KRTAP5-2Q701N4 177 aa4.01□□□□□ -1.77
HERPUD1-202ENST00000344114 KRTAP5-8O75690 187 aa4□□□□□ -1.77
HERPUD1-202ENST00000344114 KRTAP6-1Q3LI64 71 aa3.98□□□□□ -1.77
HERPUD1-202ENST00000344114 MUC5BQ9HC84 5762 aaPredicted RBP3.96□□□□□ -1.78
HERPUD1-202ENST00000344114 MUC5ACP98088 5654 aa3.96□□□□□ -1.78
HERPUD1-202ENST00000344114 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.92□□□□□ -1.78
HERPUD1-202ENST00000344114 AHNAKQ09666 5890 aaKnown RBP3.91□□□□□ -1.78
HERPUD1-202ENST00000344114 INE1O15225 51 aa3.88□□□□□ -1.79
HERPUD1-202ENST00000344114 OBSCNQ5VST9 7968 aa3.76□□□□□ -1.81
HERPUD1-202ENST00000344114 KRTAP5-11Q6L8G4 156 aa3.75□□□□□ -1.81
HERPUD1-202ENST00000344114 KRTAP6-2Q3LI66 62 aa3.73□□□□□ -1.81
HERPUD1-202ENST00000344114 LCE1FQ5T754 118 aa3.73□□□□□ -1.81
HERPUD1-202ENST00000344114 KRTAP5-1Q6L8H4 278 aa3.66□□□□□ -1.82
HERPUD1-202ENST00000344114 LCE3DQ9BYE3 92 aa3.57□□□□□ -1.84
HERPUD1-202ENST00000344114 LCE3EQ5T5B0 92 aa3.49□□□□□ -1.85
HERPUD1-202ENST00000344114 LCE1EQ5T753 118 aa3.39□□□□□ -1.87
HERPUD1-202ENST00000344114 KRTAP4-4Q9BYR3 166 aa3.28□□□□□ -1.88
HERPUD1-202ENST00000344114 LCE1BQ5T7P3 118 aa3.14□□□□□ -1.91
HERPUD1-202ENST00000344114 LCE1CQ5T751 118 aa3.11□□□□□ -1.91
HERPUD1-202ENST00000344114 PRM1P04553 51 aa3.06□□□□□ -1.92
HERPUD1-202ENST00000344114 PHGR1C9JFL3 82 aa2.77□□□□□ -1.97
HERPUD1-202ENST00000344114 KRTAP21-2Q3LI59 83 aa2.61□□□□□ -1.99
HERPUD1-202ENST00000344114 MUC19Q7Z5P9 8384 aa2.33□□□□□ -2.04
HERPUD1-202ENST00000344114 KRTAP21-1Q3LI58 79 aa2.11□□□□□ -2.07
HERPUD1-202ENST00000344114 MUC16Q8WXI7 14507 aa1.69□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 126.5 ms