RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 SPRR2BP35325 72 aa4.67□□□□□ -1.66
RRP1B-201ENST00000340648 SPRR2AP35326 72 aa4.67□□□□□ -1.66
RRP1B-201ENST00000340648 LCE3EQ5T5B0 92 aa4.66□□□□□ -1.66
RRP1B-201ENST00000340648 MT1MQ8N339 61 aa4.63□□□□□ -1.67
RRP1B-201ENST00000340648 KRTAP2-3P0C7H8 128 aa4.62□□□□□ -1.67
RRP1B-201ENST00000340648 KRTAP2-4Q9BYR9 128 aa4.62□□□□□ -1.67
RRP1B-201ENST00000340648 KRTAP2-1Q9BYU5 128 aa4.62□□□□□ -1.67
RRP1B-201ENST00000340648 FSIP2Q5CZC0 6907 aa4.61□□□□□ -1.67
RRP1B-201ENST00000340648 KRTAP9-6A8MVA2 160 aa4.61□□□□□ -1.67
RRP1B-201ENST00000340648 SYNE1Q8NF91 8797 aaKnown RBP4.56□□□□□ -1.68
RRP1B-201ENST00000340648 SPRR2DP22532 72 aa4.48□□□□□ -1.69
RRP1B-201ENST00000340648 KRTAP19-6Q3LI70 58 aa4.48□□□□□ -1.69
RRP1B-201ENST00000340648 PRM1P04553 51 aa4.47□□□□□ -1.69
RRP1B-201ENST00000340648 LCE2AQ5TA79 106 aaPredicted RBP4.44□□□□□ -1.7
RRP1B-201ENST00000340648 KRTAP4-9Q9BYQ8 210 aa4.43□□□□□ -1.7
RRP1B-201ENST00000340648 KMT2DO14686 5537 aa4.33□□□□□ -1.72
RRP1B-201ENST00000340648 MT1AP04731 61 aa4.25□□□□□ -1.73
RRP1B-201ENST00000340648 MT3P25713 68 aa4.24□□□□□ -1.73
RRP1B-201ENST00000340648 SYNE2Q8WXH0 6885 aaKnown RBP4.24□□□□□ -1.73
RRP1B-201ENST00000340648 FCGBPQ9Y6R7 5405 aaPredicted RBP4.23□□□□□ -1.73
RRP1B-201ENST00000340648 USH2AO75445 5202 aa4.23□□□□□ -1.73
RRP1B-201ENST00000340648 KRTAP6-1Q3LI64 71 aa4.16□□□□□ -1.74
RRP1B-201ENST00000340648 DSTQ03001 7570 aaKnown RBP4.14□□□□□ -1.75
RRP1B-201ENST00000340648 OBSCNQ5VST9 7968 aa4.14□□□□□ -1.75
RRP1B-201ENST00000340648 LCE2DQ5TA82 110 aaPredicted RBP4.13□□□□□ -1.75
RRP1B-201ENST00000340648 LCE5AQ5TCM9 118 aa4.09□□□□□ -1.75
RRP1B-201ENST00000340648 KRTAP9-7A8MTY7 169 aa4.06□□□□□ -1.76
RRP1B-201ENST00000340648 MT4P47944 62 aa4.04□□□□□ -1.76
RRP1B-201ENST00000340648 KRTAP6-2Q3LI66 62 aa4.03□□□□□ -1.76
RRP1B-201ENST00000340648 KRTAP9-2Q9BYQ4 174 aa4□□□□□ -1.77
RRP1B-201ENST00000340648 LCE1DQ5T752 114 aa3.93□□□□□ -1.78
RRP1B-201ENST00000340648 KRTAP9-4Q9BYQ2 154 aa3.92□□□□□ -1.78
RRP1B-201ENST00000340648 LCE1BQ5T7P3 118 aa3.92□□□□□ -1.78
RRP1B-201ENST00000340648 MUC12Q9UKN1 5478 aa3.89□□□□□ -1.79
RRP1B-201ENST00000340648 LCE1AQ5T7P2 110 aa3.87□□□□□ -1.79
RRP1B-201ENST00000340648 SSPOA2VEC9 5147 aa3.81□□□□□ -1.8
RRP1B-201ENST00000340648 KRTAP9-6A0A140TA67 174 aa3.73□□□□□ -1.81
RRP1B-201ENST00000340648 MACF1Q9UPN3 7388 aaKnown RBP3.71□□□□□ -1.82
RRP1B-201ENST00000340648 KRTAP2-2Q9BYT5 123 aa3.64□□□□□ -1.83
RRP1B-201ENST00000340648 KRTAP6-3Q3LI67 103 aa3.59□□□□□ -1.84
RRP1B-201ENST00000340648 KRTAP5-5Q701N2 237 aaPredicted RBP3.5□□□□□ -1.85
RRP1B-201ENST00000340648 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.48□□□□□ -1.85
RRP1B-201ENST00000340648 LCE4AQ5TA78 99 aa3.46□□□□□ -1.86
RRP1B-201ENST00000340648 KRTAP5-9P26371 169 aa3.42□□□□□ -1.86
RRP1B-201ENST00000340648 KRTAP20-1Q3LI63 56 aa3.36□□□□□ -1.87
RRP1B-201ENST00000340648 KRTAP4-11Q9BYQ6 195 aa3.34□□□□□ -1.88
RRP1B-201ENST00000340648 KRTAP4-6Q9BYQ5 205 aa3.31□□□□□ -1.88
RRP1B-201ENST00000340648 MDN1Q9NU22 5596 aa3.27□□□□□ -1.89
RRP1B-201ENST00000340648 KRTAP20-2Q3LI61 65 aa3.19□□□□□ -1.9
RRP1B-201ENST00000340648 MUC19Q7Z5P9 8384 aa3.18□□□□□ -1.9
RRP1B-201ENST00000340648 NEBP20929 6669 aa3.14□□□□□ -1.91
RRP1B-201ENST00000340648 LCE1CQ5T751 118 aa3.08□□□□□ -1.92
RRP1B-201ENST00000340648 LCE1EQ5T753 118 aa3.08□□□□□ -1.92
RRP1B-201ENST00000340648 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
RRP1B-201ENST00000340648 KRTAP4-4Q9BYR3 166 aa2.94□□□□□ -1.94
RRP1B-201ENST00000340648 KRTAP5-4Q6L8H1 288 aa2.93□□□□□ -1.94
RRP1B-201ENST00000340648 MUC5ACP98088 5654 aa2.84□□□□□ -1.95
RRP1B-201ENST00000340648 GPR98Q8WXG9 6306 aa2.8□□□□□ -1.96
RRP1B-201ENST00000340648 KRTAP9-9Q9BYP9 154 aa2.78□□□□□ -1.96
RRP1B-201ENST00000340648 KRTAP4-12Q9BQ66 201 aa2.77□□□□□ -1.97
RRP1B-201ENST00000340648 KRTAP4-2Q9BYR5 136 aa2.77□□□□□ -1.97
RRP1B-201ENST00000340648 KRTAP5-10Q6L8G5 202 aa2.67□□□□□ -1.98
RRP1B-201ENST00000340648 HMCN1Q96RW7 5635 aa2.67□□□□□ -1.98
RRP1B-201ENST00000340648 KRTAP5-2Q701N4 177 aa2.58□□□□□ -2
RRP1B-201ENST00000340648 KRTAP5-3Q6L8H2 238 aa2.51□□□□□ -2.01
RRP1B-201ENST00000340648 AHNAK2Q8IVF2 5795 aa2.36□□□□□ -2.03
RRP1B-201ENST00000340648 KRTAP5-8O75690 187 aa2.31□□□□□ -2.04
RRP1B-201ENST00000340648 KRTAP5-1Q6L8H4 278 aa2.3□□□□□ -2.04
RRP1B-201ENST00000340648 KRTAP21-2Q3LI59 83 aa2.28□□□□□ -2.04
RRP1B-201ENST00000340648 MUC5BQ9HC84 5762 aaPredicted RBP2.2□□□□□ -2.06
RRP1B-201ENST00000340648 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
RRP1B-201ENST00000340648 KRTAP5-11Q6L8G4 156 aa2.17□□□□□ -2.06
RRP1B-201ENST00000340648 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.08□□□□□ -2.08
RRP1B-201ENST00000340648 AHNAKQ09666 5890 aaKnown RBP1.99□□□□□ -2.09
RRP1B-201ENST00000340648 PHGR1C9JFL3 82 aa1.85□□□□□ -2.11
RRP1B-201ENST00000340648 KRTAP5-7Q6L8G8 165 aa1.83□□□□□ -2.12
RRP1B-201ENST00000340648 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 10.6 ms