RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 H3BS24 57 aa7.38□□□□□ -1.23
VRK2-201ENST00000340157 KRTAP4-7Q9BYR0 210 aa7.38□□□□□ -1.23
VRK2-201ENST00000340157 KRTAP19-3Q7Z4W3 81 aa7.36□□□□□ -1.23
VRK2-201ENST00000340157 KRTAP19-4Q3LI73 84 aa7.33□□□□□ -1.24
VRK2-201ENST00000340157 MT1GP13640 62 aa7.28□□□□□ -1.24
VRK2-201ENST00000340157 LCE5AQ5TCM9 118 aa7.26□□□□□ -1.25
VRK2-201ENST00000340157 MDN1Q9NU22 5596 aa7.24□□□□□ -1.25
VRK2-201ENST00000340157 MT1MQ8N339 61 aa7.24□□□□□ -1.25
VRK2-201ENST00000340157 KRTAP6-3Q3LI67 103 aa7.22□□□□□ -1.25
VRK2-201ENST00000340157 LCE1AQ5T7P2 110 aa7.19□□□□□ -1.26
VRK2-201ENST00000340157 KRTAP4-3Q9BYR4 195 aa7.17□□□□□ -1.26
VRK2-201ENST00000340157 LUZP6Q538Z0 58 aa7.15□□□□□ -1.26
VRK2-201ENST00000340157 NDUFAF8A1L188 74 aa7.15□□□□□ -1.27
VRK2-201ENST00000340157 KRTAP9-6A8MVA2 160 aa7.15□□□□□ -1.27
VRK2-201ENST00000340157 SPRR2EP22531 72 aa7.09□□□□□ -1.28
VRK2-201ENST00000340157 SPRR2BP35325 72 aa7.09□□□□□ -1.28
VRK2-201ENST00000340157 SPRR2AP35326 72 aa7.09□□□□□ -1.28
VRK2-201ENST00000340157 KRTAP9-7A8MTY7 169 aa6.97□□□□□ -1.29
VRK2-201ENST00000340157 DSTQ03001 7570 aaKnown RBP6.96□□□□□ -1.3
VRK2-201ENST00000340157 LOC100996750A0A140TA64 210 aa6.92□□□□□ -1.3
VRK2-201ENST00000340157 SPRR2DP22532 72 aa6.81□□□□□ -1.32
VRK2-201ENST00000340157 NEBP20929 6669 aa6.8□□□□□ -1.32
VRK2-201ENST00000340157 KRTAP2-3P0C7H8 128 aa6.55□□□□□ -1.36
VRK2-201ENST00000340157 LCE3BQ5TA77 95 aa6.55□□□□□ -1.36
VRK2-201ENST00000340157 KRTAP5-5Q701N2 237 aaPredicted RBP6.55□□□□□ -1.36
VRK2-201ENST00000340157 KRTAP2-4Q9BYR9 128 aa6.55□□□□□ -1.36
VRK2-201ENST00000340157 KRTAP2-1Q9BYU5 128 aa6.55□□□□□ -1.36
VRK2-201ENST00000340157 KRTAP4-6Q9BYQ5 205 aa6.51□□□□□ -1.37
VRK2-201ENST00000340157 MT1AP04731 61 aa6.39□□□□□ -1.39
VRK2-201ENST00000340157 KRTAP6-1Q3LI64 71 aa6.39□□□□□ -1.39
VRK2-201ENST00000340157 A0A0A0MQY5 61 aa6.36□□□□□ -1.39
VRK2-201ENST00000340157 SYNE1Q8NF91 8797 aaKnown RBP6.26□□□□□ -1.41
VRK2-201ENST00000340157 KRTAP5-4Q6L8H1 288 aa6.22□□□□□ -1.41
VRK2-201ENST00000340157 KRTAP20-1Q3LI63 56 aa6.16□□□□□ -1.42
VRK2-201ENST00000340157 KRTAP2-2Q9BYT5 123 aa6.15□□□□□ -1.42
VRK2-201ENST00000340157 KRTAP4-12Q9BQ66 201 aa6.13□□□□□ -1.43
VRK2-201ENST00000340157 KRTAP9-4Q9BYQ2 154 aa6.07□□□□□ -1.44
VRK2-201ENST00000340157 LCE4AQ5TA78 99 aa6.02□□□□□ -1.45
VRK2-201ENST00000340157 KRTAP12-4P60329 112 aa5.97□□□□□ -1.45
VRK2-201ENST00000340157 MT4P47944 62 aa5.95□□□□□ -1.46
VRK2-201ENST00000340157 KRTAP4-9Q9BYQ8 210 aa5.91□□□□□ -1.46
VRK2-201ENST00000340157 INE1O15225 51 aa5.88□□□□□ -1.47
VRK2-201ENST00000340157 KRTAP6-2Q3LI66 62 aa5.85□□□□□ -1.47
VRK2-201ENST00000340157 LCE1DQ5T752 114 aa5.85□□□□□ -1.47
VRK2-201ENST00000340157 HMCN1Q96RW7 5635 aa5.82□□□□□ -1.48
VRK2-201ENST00000340157 KRTAP20-2Q3LI61 65 aa5.81□□□□□ -1.48
VRK2-201ENST00000340157 KRTAP9-9Q9BYP9 154 aa5.77□□□□□ -1.49
VRK2-201ENST00000340157 MT3P25713 68 aa5.75□□□□□ -1.49
VRK2-201ENST00000340157 KRTAP5-2Q701N4 177 aa5.66□□□□□ -1.5
VRK2-201ENST00000340157 KRTAP5-3Q6L8H2 238 aa5.61□□□□□ -1.51
VRK2-201ENST00000340157 LCE3DQ9BYE3 92 aa5.58□□□□□ -1.52
VRK2-201ENST00000340157 OBSCNQ5VST9 7968 aa5.44□□□□□ -1.54
VRK2-201ENST00000340157 LCE3EQ5T5B0 92 aa5.42□□□□□ -1.54
VRK2-201ENST00000340157 KRTAP4-11Q9BYQ6 195 aa5.21□□□□□ -1.58
VRK2-201ENST00000340157 AHNAK2Q8IVF2 5795 aa5.13□□□□□ -1.59
VRK2-201ENST00000340157 KRTAP4-2Q9BYR5 136 aa5.11□□□□□ -1.59
VRK2-201ENST00000340157 LCE1EQ5T753 118 aa4.98□□□□□ -1.61
VRK2-201ENST00000340157 KRTAP5-1Q6L8H4 278 aa4.9□□□□□ -1.63
VRK2-201ENST00000340157 KRTAP5-8O75690 187 aa4.85□□□□□ -1.63
VRK2-201ENST00000340157 KRTAP5-10Q6L8G5 202 aa4.83□□□□□ -1.64
VRK2-201ENST00000340157 PRM1P04553 51 aa4.79□□□□□ -1.64
VRK2-201ENST00000340157 MUC5ACP98088 5654 aa4.74□□□□□ -1.65
VRK2-201ENST00000340157 LCE1BQ5T7P3 118 aa4.71□□□□□ -1.66
VRK2-201ENST00000340157 KRTAP5-7Q6L8G8 165 aa4.69□□□□□ -1.66
VRK2-201ENST00000340157 LCE1CQ5T751 118 aa4.66□□□□□ -1.66
VRK2-201ENST00000340157 GPR98Q8WXG9 6306 aa4.59□□□□□ -1.68
VRK2-201ENST00000340157 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.38□□□□□ -1.71
VRK2-201ENST00000340157 MUC5BQ9HC84 5762 aaPredicted RBP4.19□□□□□ -1.74
VRK2-201ENST00000340157 KRTAP21-2Q3LI59 83 aa4.18□□□□□ -1.74
VRK2-201ENST00000340157 KRTAP5-11Q6L8G4 156 aa4.12□□□□□ -1.75
VRK2-201ENST00000340157 LCE1FQ5T754 118 aa4.02□□□□□ -1.77
VRK2-201ENST00000340157 AHNAKQ09666 5890 aaKnown RBP3.81□□□□□ -1.8
VRK2-201ENST00000340157 KRTAP4-4Q9BYR3 166 aa3.73□□□□□ -1.81
VRK2-201ENST00000340157 PHGR1C9JFL3 82 aa3.55□□□□□ -1.84
VRK2-201ENST00000340157 MUC19Q7Z5P9 8384 aa3.23□□□□□ -1.89
VRK2-201ENST00000340157 KRTAP21-1Q3LI58 79 aa2.93□□□□□ -1.94
VRK2-201ENST00000340157 MUC16Q8WXI7 14507 aa2.32□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 67.8 ms