RNA–Protein interactions for RNA: ENST00000338305.6

LRFN2-201, Transcript of leucine rich repeat and fibronectin type III domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN2, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN2-201ENST00000338305 SYNE1Q8NF91 8797 aaKnown RBP5.38□□□□□ -1.55
LRFN2-201ENST00000338305 LCE2DQ5TA82 110 aaPredicted RBP5.37□□□□□ -1.55
LRFN2-201ENST00000338305 KRTAP12-4P60329 112 aa5.36□□□□□ -1.55
LRFN2-201ENST00000338305 MT1LQ93083 61 aa5.35□□□□□ -1.55
LRFN2-201ENST00000338305 OBSCNQ5VST9 7968 aa5.34□□□□□ -1.55
LRFN2-201ENST00000338305 MT1GP13640 62 aa5.31□□□□□ -1.56
LRFN2-201ENST00000338305 MUC12Q9UKN1 5478 aa5.27□□□□□ -1.57
LRFN2-201ENST00000338305 MT1EP04732 61 aa5.26□□□□□ -1.57
LRFN2-201ENST00000338305 KRTAP19-6Q3LI70 58 aa5.19□□□□□ -1.58
LRFN2-201ENST00000338305 KRTAP4-9Q9BYQ8 210 aa5.16□□□□□ -1.58
LRFN2-201ENST00000338305 SSPOA2VEC9 5147 aa5.14□□□□□ -1.59
LRFN2-201ENST00000338305 LCE3BQ5TA77 95 aa5.11□□□□□ -1.59
LRFN2-201ENST00000338305 KRTAP9-2Q9BYQ4 174 aa5.07□□□□□ -1.6
LRFN2-201ENST00000338305 MT1MQ8N339 61 aa4.91□□□□□ -1.62
LRFN2-201ENST00000338305 SYNE2Q8WXH0 6885 aaKnown RBP4.91□□□□□ -1.62
LRFN2-201ENST00000338305 KRTAP9-7A8MTY7 169 aa4.87□□□□□ -1.63
LRFN2-201ENST00000338305 KRTAP19-4Q3LI73 84 aa4.83□□□□□ -1.64
LRFN2-201ENST00000338305 KRTAP19-3Q7Z4W3 81 aa4.82□□□□□ -1.64
LRFN2-201ENST00000338305 PRM1P04553 51 aa4.82□□□□□ -1.64
LRFN2-201ENST00000338305 MACF1Q9UPN3 7388 aaKnown RBP4.74□□□□□ -1.65
LRFN2-201ENST00000338305 LCE3DQ9BYE3 92 aa4.73□□□□□ -1.65
LRFN2-201ENST00000338305 SPRR2FQ96RM1 72 aa4.72□□□□□ -1.65
LRFN2-201ENST00000338305 KRTAP9-6A0A140TA67 174 aa4.69□□□□□ -1.66
LRFN2-201ENST00000338305 KRTAP6-1Q3LI64 71 aa4.66□□□□□ -1.66
LRFN2-201ENST00000338305 LCE3EQ5T5B0 92 aa4.66□□□□□ -1.66
LRFN2-201ENST00000338305 KRTAP5-5Q701N2 237 aaPredicted RBP4.59□□□□□ -1.67
LRFN2-201ENST00000338305 KRTAP5-9P26371 169 aa4.57□□□□□ -1.68
LRFN2-201ENST00000338305 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.54□□□□□ -1.68
LRFN2-201ENST00000338305 MDN1Q9NU22 5596 aa4.52□□□□□ -1.69
LRFN2-201ENST00000338305 LCE5AQ5TCM9 118 aa4.52□□□□□ -1.69
LRFN2-201ENST00000338305 KRTAP6-3Q3LI67 103 aa4.48□□□□□ -1.69
LRFN2-201ENST00000338305 MT1AP04731 61 aa4.47□□□□□ -1.69
LRFN2-201ENST00000338305 KRTAP6-2Q3LI66 62 aa4.47□□□□□ -1.69
LRFN2-201ENST00000338305 LCE1AQ5T7P2 110 aa4.37□□□□□ -1.71
LRFN2-201ENST00000338305 SPRR2EP22531 72 aa4.32□□□□□ -1.72
LRFN2-201ENST00000338305 SPRR2BP35325 72 aa4.32□□□□□ -1.72
LRFN2-201ENST00000338305 SPRR2AP35326 72 aa4.32□□□□□ -1.72
LRFN2-201ENST00000338305 SPRR2DP22532 72 aa4.17□□□□□ -1.74
LRFN2-201ENST00000338305 KRTAP2-2Q9BYT5 123 aa4.15□□□□□ -1.74
LRFN2-201ENST00000338305 KRTAP9-4Q9BYQ2 154 aa4.1□□□□□ -1.75
LRFN2-201ENST00000338305 LCE1EQ5T753 118 aa4.04□□□□□ -1.76
LRFN2-201ENST00000338305 NEBP20929 6669 aa4.04□□□□□ -1.76
LRFN2-201ENST00000338305 MT3P25713 68 aa3.97□□□□□ -1.77
LRFN2-201ENST00000338305 LCE1DQ5T752 114 aa3.83□□□□□ -1.8
LRFN2-201ENST00000338305 KRTAP5-4Q6L8H1 288 aa3.83□□□□□ -1.8
LRFN2-201ENST00000338305 KRTAP20-1Q3LI63 56 aa3.82□□□□□ -1.8
LRFN2-201ENST00000338305 LCE4AQ5TA78 99 aa3.76□□□□□ -1.81
LRFN2-201ENST00000338305 KRTAP4-11Q9BYQ6 195 aa3.7□□□□□ -1.82
LRFN2-201ENST00000338305 MUC19Q7Z5P9 8384 aa3.69□□□□□ -1.82
LRFN2-201ENST00000338305 MT4P47944 62 aa3.66□□□□□ -1.82
LRFN2-201ENST00000338305 KRTAP4-6Q9BYQ5 205 aa3.59□□□□□ -1.83
LRFN2-201ENST00000338305 MUC5ACP98088 5654 aa3.55□□□□□ -1.84
LRFN2-201ENST00000338305 KRTAP20-2Q3LI61 65 aa3.55□□□□□ -1.84
LRFN2-201ENST00000338305 LCE1BQ5T7P3 118 aa3.54□□□□□ -1.84
LRFN2-201ENST00000338305 KRTAP5-2Q701N4 177 aa3.48□□□□□ -1.85
LRFN2-201ENST00000338305 HMCN1Q96RW7 5635 aa3.46□□□□□ -1.86
LRFN2-201ENST00000338305 KRTAP5-3Q6L8H2 238 aa3.43□□□□□ -1.86
LRFN2-201ENST00000338305 GPR98Q8WXG9 6306 aa3.3□□□□□ -1.88
LRFN2-201ENST00000338305 KRTAP5-10Q6L8G5 202 aa3.27□□□□□ -1.89
LRFN2-201ENST00000338305 KRTAP4-4Q9BYR3 166 aa3.1□□□□□ -1.91
LRFN2-201ENST00000338305 LCE1FQ5T754 118 aa3.09□□□□□ -1.92
LRFN2-201ENST00000338305 AHNAK2Q8IVF2 5795 aa3.08□□□□□ -1.92
LRFN2-201ENST00000338305 KRTAP5-1Q6L8H4 278 aa2.98□□□□□ -1.93
LRFN2-201ENST00000338305 KRTAP5-8O75690 187 aa2.96□□□□□ -1.94
LRFN2-201ENST00000338305 KRTAP5-7Q6L8G8 165 aa2.93□□□□□ -1.94
LRFN2-201ENST00000338305 KRTAP4-2Q9BYR5 136 aa2.92□□□□□ -1.94
LRFN2-201ENST00000338305 LCE1CQ5T751 118 aa2.89□□□□□ -1.95
LRFN2-201ENST00000338305 KRTAP21-2Q3LI59 83 aa2.85□□□□□ -1.95
LRFN2-201ENST00000338305 KRTAP9-9Q9BYP9 154 aa2.8□□□□□ -1.96
LRFN2-201ENST00000338305 KRTAP21-1Q3LI58 79 aa2.8□□□□□ -1.96
LRFN2-201ENST00000338305 MUC5BQ9HC84 5762 aaPredicted RBP2.78□□□□□ -1.96
LRFN2-201ENST00000338305 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.73□□□□□ -1.97
LRFN2-201ENST00000338305 KRTAP4-12Q9BQ66 201 aa2.72□□□□□ -1.97
LRFN2-201ENST00000338305 KRTAP5-11Q6L8G4 156 aa2.56□□□□□ -2
LRFN2-201ENST00000338305 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
LRFN2-201ENST00000338305 PHGR1C9JFL3 82 aa2.18□□□□□ -2.06
LRFN2-201ENST00000338305 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 104.7 ms