RNA–Protein interactions for RNA: ENST00000336273.7

MTDH-201, Transcript of metadherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTDH, Length 6,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTDH-201ENST00000336273 KRTAP9-2Q9BYQ4 174 aa5.13□□□□□ -1.59
MTDH-201ENST00000336273 KRTAP4-3Q9BYR4 195 aa5.12□□□□□ -1.59
MTDH-201ENST00000336273 MT1MQ8N339 61 aa5.11□□□□□ -1.59
MTDH-201ENST00000336273 MT4P47944 62 aa5.1□□□□□ -1.59
MTDH-201ENST00000336273 LCE2AQ5TA79 106 aaPredicted RBP5.03□□□□□ -1.6
MTDH-201ENST00000336273 MT3P25713 68 aa5.02□□□□□ -1.61
MTDH-201ENST00000336273 LCE1BQ5T7P3 118 aa5□□□□□ -1.61
MTDH-201ENST00000336273 RNF213Q63HN8 5207 aa5□□□□□ -1.61
MTDH-201ENST00000336273 UBR4Q5T4S7 5183 aa4.98□□□□□ -1.61
MTDH-201ENST00000336273 FAT4Q6V0I7 4981 aa4.97□□□□□ -1.61
MTDH-201ENST00000336273 LCE1DQ5T752 114 aa4.93□□□□□ -1.62
MTDH-201ENST00000336273 KRTAP4-9Q9BYQ8 210 aa4.9□□□□□ -1.62
MTDH-201ENST00000336273 KRTAP9-6A0A140TA67 174 aa4.87□□□□□ -1.63
MTDH-201ENST00000336273 SYNE1Q8NF91 8797 aaKnown RBP4.86□□□□□ -1.63
MTDH-201ENST00000336273 KRTAP19-7Q3SYF9 63 aa4.85□□□□□ -1.63
MTDH-201ENST00000336273 FSIP2Q5CZC0 6907 aa4.84□□□□□ -1.64
MTDH-201ENST00000336273 HMCN2Q8NDA2 5059 aa4.77□□□□□ -1.65
MTDH-201ENST00000336273 MT1AP04731 61 aa4.74□□□□□ -1.65
MTDH-201ENST00000336273 KRTAP2-3P0C7H8 128 aa4.72□□□□□ -1.65
MTDH-201ENST00000336273 KRTAP2-4Q9BYR9 128 aa4.72□□□□□ -1.65
MTDH-201ENST00000336273 KRTAP2-1Q9BYU5 128 aa4.72□□□□□ -1.65
MTDH-201ENST00000336273 MUC2Q02817 5179 aa4.68□□□□□ -1.66
MTDH-201ENST00000336273 LCE5AQ5TCM9 118 aa4.67□□□□□ -1.66
MTDH-201ENST00000336273 LCE1AQ5T7P2 110 aa4.62□□□□□ -1.67
MTDH-201ENST00000336273 KRTAP20-1Q3LI63 56 aa4.61□□□□□ -1.67
MTDH-201ENST00000336273 KRTAP6-3Q3LI67 103 aa4.6□□□□□ -1.67
MTDH-201ENST00000336273 KRTAP9-7A8MTY7 169 aa4.6□□□□□ -1.67
MTDH-201ENST00000336273 SYNE2Q8WXH0 6885 aaKnown RBP4.58□□□□□ -1.68
MTDH-201ENST00000336273 KRTAP6-2Q3LI66 62 aa4.55□□□□□ -1.68
MTDH-201ENST00000336273 KRTAP6-1Q3LI64 71 aa4.53□□□□□ -1.68
MTDH-201ENST00000336273 KRTAP9-6A8MVA2 160 aa4.5□□□□□ -1.69
MTDH-201ENST00000336273 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.46□□□□□ -1.7
MTDH-201ENST00000336273 KRTAP9-4Q9BYQ2 154 aa4.43□□□□□ -1.7
MTDH-201ENST00000336273 OBSCNQ5VST9 7968 aa4.4□□□□□ -1.7
MTDH-201ENST00000336273 LCE4AQ5TA78 99 aa4.38□□□□□ -1.71
MTDH-201ENST00000336273 LCE1CQ5T751 118 aa4.35□□□□□ -1.71
MTDH-201ENST00000336273 LCE1EQ5T753 118 aa4.35□□□□□ -1.71
MTDH-201ENST00000336273 LCE1FQ5T754 118 aa4.35□□□□□ -1.71
MTDH-201ENST00000336273 KRTAP2-2Q9BYT5 123 aa4.33□□□□□ -1.72
MTDH-201ENST00000336273 USH2AO75445 5202 aa4.18□□□□□ -1.74
MTDH-201ENST00000336273 FCGBPQ9Y6R7 5405 aaPredicted RBP4.04□□□□□ -1.76
MTDH-201ENST00000336273 DSTQ03001 7570 aaKnown RBP3.96□□□□□ -1.78
MTDH-201ENST00000336273 KRTAP5-9P26371 169 aa3.93□□□□□ -1.78
MTDH-201ENST00000336273 NEBP20929 6669 aa3.89□□□□□ -1.79
MTDH-201ENST00000336273 KRTAP4-11Q9BYQ6 195 aa3.86□□□□□ -1.79
MTDH-201ENST00000336273 MACF1Q9UPN3 7388 aaKnown RBP3.86□□□□□ -1.79
MTDH-201ENST00000336273 KMT2DO14686 5537 aa3.84□□□□□ -1.79
MTDH-201ENST00000336273 SSPOA2VEC9 5147 aa3.82□□□□□ -1.8
MTDH-201ENST00000336273 KRTAP9-9Q9BYP9 154 aa3.78□□□□□ -1.8
MTDH-201ENST00000336273 KRTAP4-6Q9BYQ5 205 aa3.7□□□□□ -1.82
MTDH-201ENST00000336273 KRTAP20-2Q3LI61 65 aa3.68□□□□□ -1.82
MTDH-201ENST00000336273 MDN1Q9NU22 5596 aa3.67□□□□□ -1.82
MTDH-201ENST00000336273 MUC12Q9UKN1 5478 aa3.64□□□□□ -1.83
MTDH-201ENST00000336273 KRTAP4-4Q9BYR3 166 aa3.55□□□□□ -1.84
MTDH-201ENST00000336273 GPR98Q8WXG9 6306 aa3.51□□□□□ -1.85
MTDH-201ENST00000336273 MUC19Q7Z5P9 8384 aa3.5□□□□□ -1.85
MTDH-201ENST00000336273 KRTAP5-4Q6L8H1 288 aa3.43□□□□□ -1.86
MTDH-201ENST00000336273 KRTAP4-12Q9BQ66 201 aa3.43□□□□□ -1.86
MTDH-201ENST00000336273 KRTAP4-2Q9BYR5 136 aa3.43□□□□□ -1.86
MTDH-201ENST00000336273 KRTAP5-5Q701N2 237 aaPredicted RBP3.42□□□□□ -1.86
MTDH-201ENST00000336273 MUC5ACP98088 5654 aa3.02□□□□□ -1.93
MTDH-201ENST00000336273 KRTAP5-3Q6L8H2 238 aa3.02□□□□□ -1.93
MTDH-201ENST00000336273 AHNAK2Q8IVF2 5795 aa2.97□□□□□ -1.93
MTDH-201ENST00000336273 HMCN1Q96RW7 5635 aa2.91□□□□□ -1.94
MTDH-201ENST00000336273 KRTAP5-8O75690 187 aa2.76□□□□□ -1.97
MTDH-201ENST00000336273 KRTAP5-2Q701N4 177 aa2.69□□□□□ -1.98
MTDH-201ENST00000336273 KRTAP5-10Q6L8G5 202 aa2.62□□□□□ -1.99
MTDH-201ENST00000336273 PHGR1C9JFL3 82 aa2.55□□□□□ -2
MTDH-201ENST00000336273 MUC5BQ9HC84 5762 aaPredicted RBP2.52□□□□□ -2.01
MTDH-201ENST00000336273 AHNAKQ09666 5890 aaKnown RBP2.46□□□□□ -2.02
MTDH-201ENST00000336273 KRTAP5-11Q6L8G4 156 aa2.43□□□□□ -2.02
MTDH-201ENST00000336273 KRTAP5-1Q6L8H4 278 aa2.36□□□□□ -2.03
MTDH-201ENST00000336273 KRTAP21-2Q3LI59 83 aa2.25□□□□□ -2.05
MTDH-201ENST00000336273 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.13□□□□□ -2.07
MTDH-201ENST00000336273 KRTAP21-1Q3LI58 79 aa2.13□□□□□ -2.07
MTDH-201ENST00000336273 KRTAP5-7Q6L8G8 165 aa2.02□□□□□ -2.09
MTDH-201ENST00000336273 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 9 ms