RNA–Protein interactions for RNA: ENST00000335756.8

CENPA-202, Transcript of centromere protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CENPA, Length 1,452 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPA-202ENST00000335756 KRTAP4-9Q9BYQ8 210 aa7.29□□□□□ -1.24
CENPA-202ENST00000335756 C10orf95Q9H7T3 257 aa7.24□□□□□ -1.25
CENPA-202ENST00000335756 SPRR2EP22531 72 aa7.23□□□□□ -1.25
CENPA-202ENST00000335756 SPRR2BP35325 72 aa7.23□□□□□ -1.25
CENPA-202ENST00000335756 SPRR2AP35326 72 aa7.23□□□□□ -1.25
CENPA-202ENST00000335756 KRTAP4-2Q9BYR5 136 aa7.22□□□□□ -1.25
CENPA-202ENST00000335756 TNP1P09430 55 aa7.17□□□□□ -1.26
CENPA-202ENST00000335756 LCE1AQ5T7P2 110 aa7.17□□□□□ -1.26
CENPA-202ENST00000335756 A0A0A0MQY5 61 aa7.13□□□□□ -1.27
CENPA-202ENST00000335756 KRTAP19-7Q3SYF9 63 aa7.08□□□□□ -1.28
CENPA-202ENST00000335756 KRTAP20-1Q3LI63 56 aa7.04□□□□□ -1.28
CENPA-202ENST00000335756 MT1EP04732 61 aa7.01□□□□□ -1.29
CENPA-202ENST00000335756 LCE3AQ5TA76 89 aa7□□□□□ -1.29
CENPA-202ENST00000335756 KRTAP19-5Q3LI72 72 aa6.99□□□□□ -1.29
CENPA-202ENST00000335756 SPRR2DP22532 72 aa6.98□□□□□ -1.29
CENPA-202ENST00000335756 KRTAP2-3P0C7H8 128 aa6.96□□□□□ -1.3
CENPA-202ENST00000335756 KRTAP4-11Q9BYQ6 195 aa6.96□□□□□ -1.3
CENPA-202ENST00000335756 KRTAP2-4Q9BYR9 128 aa6.96□□□□□ -1.3
CENPA-202ENST00000335756 KRTAP19-3Q7Z4W3 81 aa6.89□□□□□ -1.31
CENPA-202ENST00000335756 LCE5AQ5TCM9 118 aa6.85□□□□□ -1.31
CENPA-202ENST00000335756 PP632Q6XCG6 107 aa6.82□□□□□ -1.32
CENPA-202ENST00000335756 MT1GP13640 62 aa6.77□□□□□ -1.33
CENPA-202ENST00000335756 LCE4AQ5TA78 99 aa6.76□□□□□ -1.33
CENPA-202ENST00000335756 KRTAP2-2Q9BYT5 123 aa6.76□□□□□ -1.33
CENPA-202ENST00000335756 KRTAP2-1Q9BYU5 128 aa6.76□□□□□ -1.33
CENPA-202ENST00000335756 KRTAP12-3P60328 96 aa6.75□□□□□ -1.33
CENPA-202ENST00000335756 MT1LQ93083 61 aa6.75□□□□□ -1.33
CENPA-202ENST00000335756 KRTAP23-1A1A580 65 aa6.73□□□□□ -1.33
CENPA-202ENST00000335756 KRTAP5-3Q6L8H2 238 aa6.72□□□□□ -1.33
CENPA-202ENST00000335756 KRTAP15-1Q3LI76 137 aa6.69□□□□□ -1.34
CENPA-202ENST00000335756 MT1MQ8N339 61 aa6.65□□□□□ -1.35
CENPA-202ENST00000335756 DSTQ03001 7570 aaKnown RBP6.59□□□□□ -1.35
CENPA-202ENST00000335756 KRTAP4-3Q9BYR4 195 aa6.47□□□□□ -1.37
CENPA-202ENST00000335756 KRTAP19-4Q3LI73 84 aa6.41□□□□□ -1.38
CENPA-202ENST00000335756 NDUFAF8A1L188 74 aa6.32□□□□□ -1.4
CENPA-202ENST00000335756 LCE3CQ5T5A8 94 aa6.25□□□□□ -1.41
CENPA-202ENST00000335756 SPRR5A0A1B0GTR4 108 aa6.22□□□□□ -1.41
CENPA-202ENST00000335756 LUZP6Q538Z0 58 aa6.21□□□□□ -1.42
CENPA-202ENST00000335756 KRTAP5-4Q6L8H1 288 aa6.14□□□□□ -1.43
CENPA-202ENST00000335756 MT4P47944 62 aa6.08□□□□□ -1.44
CENPA-202ENST00000335756 KRTAP5-5Q701N2 237 aaPredicted RBP6.06□□□□□ -1.44
CENPA-202ENST00000335756 HMCN1Q96RW7 5635 aa5.95□□□□□ -1.46
CENPA-202ENST00000335756 KRTAP9-6A8MVA2 160 aa5.87□□□□□ -1.47
CENPA-202ENST00000335756 KRTAP12-4P60329 112 aa5.83□□□□□ -1.48
CENPA-202ENST00000335756 KRTAP20-2Q3LI61 65 aa5.77□□□□□ -1.49
CENPA-202ENST00000335756 SYNE1Q8NF91 8797 aaKnown RBP5.76□□□□□ -1.49
CENPA-202ENST00000335756 MT1AP04731 61 aa5.75□□□□□ -1.49
CENPA-202ENST00000335756 GPR98Q8WXG9 6306 aa5.71□□□□□ -1.49
CENPA-202ENST00000335756 KRTAP6-1Q3LI64 71 aa5.7□□□□□ -1.5
CENPA-202ENST00000335756 AHNAK2Q8IVF2 5795 aa5.58□□□□□ -1.52
CENPA-202ENST00000335756 KRTAP5-10Q6L8G5 202 aa5.48□□□□□ -1.53
CENPA-202ENST00000335756 KRTAP5-2Q701N4 177 aa5.43□□□□□ -1.54
CENPA-202ENST00000335756 KRTAP6-2Q3LI66 62 aa5.38□□□□□ -1.55
CENPA-202ENST00000335756 INE1O15225 51 aa5.33□□□□□ -1.56
CENPA-202ENST00000335756 MT3P25713 68 aa5.26□□□□□ -1.57
CENPA-202ENST00000335756 KRTAP5-7Q6L8G8 165 aa5.22□□□□□ -1.57
CENPA-202ENST00000335756 OBSCNQ5VST9 7968 aa5.05□□□□□ -1.6
CENPA-202ENST00000335756 KRTAP5-8O75690 187 aa5□□□□□ -1.61
CENPA-202ENST00000335756 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.96□□□□□ -1.62
CENPA-202ENST00000335756 KRTAP5-1Q6L8H4 278 aa4.81□□□□□ -1.64
CENPA-202ENST00000335756 LCE1EQ5T753 118 aa4.75□□□□□ -1.65
CENPA-202ENST00000335756 KRTAP5-11Q6L8G4 156 aa4.69□□□□□ -1.66
CENPA-202ENST00000335756 MUC5ACP98088 5654 aa4.67□□□□□ -1.66
CENPA-202ENST00000335756 LCE3DQ9BYE3 92 aa4.58□□□□□ -1.68
CENPA-202ENST00000335756 MUC5BQ9HC84 5762 aaPredicted RBP4.56□□□□□ -1.68
CENPA-202ENST00000335756 AHNAKQ09666 5890 aaKnown RBP4.47□□□□□ -1.69
CENPA-202ENST00000335756 LCE1BQ5T7P3 118 aa4.44□□□□□ -1.7
CENPA-202ENST00000335756 LCE1CQ5T751 118 aa4.4□□□□□ -1.71
CENPA-202ENST00000335756 LCE3EQ5T5B0 92 aa4.37□□□□□ -1.71
CENPA-202ENST00000335756 LCE1FQ5T754 118 aa4.22□□□□□ -1.73
CENPA-202ENST00000335756 KRTAP4-4Q9BYR3 166 aa4.12□□□□□ -1.75
CENPA-202ENST00000335756 PRM1P04553 51 aa3.88□□□□□ -1.79
CENPA-202ENST00000335756 KRTAP21-2Q3LI59 83 aa3.74□□□□□ -1.81
CENPA-202ENST00000335756 PHGR1C9JFL3 82 aa3.4□□□□□ -1.87
CENPA-202ENST00000335756 MUC19Q7Z5P9 8384 aa3.07□□□□□ -1.92
CENPA-202ENST00000335756 KRTAP21-1Q3LI58 79 aa2.51□□□□□ -2.01
CENPA-202ENST00000335756 MUC16Q8WXI7 14507 aa2.19□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 71 ms