RNA–Protein interactions for RNA: ENST00000324894.12

GTPBP3-201, Transcript of GTP binding protein 3, mitochondrial, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTPBP3, Length 2,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-201ENST00000324894 KRTAP19-4Q3LI73 84 aa5.99□□□□□ -1.45
GTPBP3-201ENST00000324894 MT1LQ93083 61 aa5.98□□□□□ -1.45
GTPBP3-201ENST00000324894 MUC12Q9UKN1 5478 aa5.89□□□□□ -1.47
GTPBP3-201ENST00000324894 KRTAP4-7Q9BYR0 210 aa5.85□□□□□ -1.47
GTPBP3-201ENST00000324894 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.82□□□□□ -1.48
GTPBP3-201ENST00000324894 KRTAP9-6A8MVA2 160 aa5.79□□□□□ -1.48
GTPBP3-201ENST00000324894 MDN1Q9NU22 5596 aa5.75□□□□□ -1.49
GTPBP3-201ENST00000324894 KRTAP19-3Q7Z4W3 81 aa5.74□□□□□ -1.49
GTPBP3-201ENST00000324894 MT1GP13640 62 aa5.7□□□□□ -1.5
GTPBP3-201ENST00000324894 SPRR2FQ96RM1 72 aa5.69□□□□□ -1.5
GTPBP3-201ENST00000324894 MT1MQ8N339 61 aa5.67□□□□□ -1.5
GTPBP3-201ENST00000324894 LCE5AQ5TCM9 118 aa5.61□□□□□ -1.51
GTPBP3-201ENST00000324894 KRTAP4-3Q9BYR4 195 aa5.61□□□□□ -1.51
GTPBP3-201ENST00000324894 KRTAP9-7A8MTY7 169 aa5.58□□□□□ -1.52
GTPBP3-201ENST00000324894 KRTAP2-3P0C7H8 128 aa5.57□□□□□ -1.52
GTPBP3-201ENST00000324894 KRTAP2-4Q9BYR9 128 aa5.57□□□□□ -1.52
GTPBP3-201ENST00000324894 KRTAP2-1Q9BYU5 128 aa5.57□□□□□ -1.52
GTPBP3-201ENST00000324894 DSTQ03001 7570 aaKnown RBP5.55□□□□□ -1.52
GTPBP3-201ENST00000324894 KRTAP5-9P26371 169 aa5.53□□□□□ -1.52
GTPBP3-201ENST00000324894 KRTAP6-3Q3LI67 103 aa5.51□□□□□ -1.53
GTPBP3-201ENST00000324894 LOC100996750A0A140TA64 210 aa5.48□□□□□ -1.53
GTPBP3-201ENST00000324894 LCE1AQ5T7P2 110 aa5.4□□□□□ -1.54
GTPBP3-201ENST00000324894 SPRR2EP22531 72 aa5.4□□□□□ -1.55
GTPBP3-201ENST00000324894 SPRR2BP35325 72 aa5.4□□□□□ -1.55
GTPBP3-201ENST00000324894 SPRR2AP35326 72 aa5.4□□□□□ -1.55
GTPBP3-201ENST00000324894 NEBP20929 6669 aa5.39□□□□□ -1.55
GTPBP3-201ENST00000324894 SPRR2DP22532 72 aa5.18□□□□□ -1.58
GTPBP3-201ENST00000324894 KRTAP12-4P60329 112 aa5.15□□□□□ -1.59
GTPBP3-201ENST00000324894 KRTAP5-5Q701N2 237 aaPredicted RBP5.09□□□□□ -1.6
GTPBP3-201ENST00000324894 MT1AP04731 61 aa5.07□□□□□ -1.6
GTPBP3-201ENST00000324894 KRTAP6-1Q3LI64 71 aa5.04□□□□□ -1.6
GTPBP3-201ENST00000324894 LCE3BQ5TA77 95 aa5□□□□□ -1.61
GTPBP3-201ENST00000324894 KRTAP20-1Q3LI63 56 aa4.88□□□□□ -1.63
GTPBP3-201ENST00000324894 SYNE1Q8NF91 8797 aaKnown RBP4.85□□□□□ -1.63
GTPBP3-201ENST00000324894 KRTAP9-4Q9BYQ2 154 aa4.78□□□□□ -1.64
GTPBP3-201ENST00000324894 KRTAP4-9Q9BYQ8 210 aa4.78□□□□□ -1.64
GTPBP3-201ENST00000324894 KRTAP2-2Q9BYT5 123 aa4.76□□□□□ -1.65
GTPBP3-201ENST00000324894 KRTAP5-4Q6L8H1 288 aa4.69□□□□□ -1.66
GTPBP3-201ENST00000324894 PRM1P04553 51 aa4.65□□□□□ -1.66
GTPBP3-201ENST00000324894 MT4P47944 62 aa4.62□□□□□ -1.67
GTPBP3-201ENST00000324894 LCE3DQ9BYE3 92 aa4.61□□□□□ -1.67
GTPBP3-201ENST00000324894 KRTAP6-2Q3LI66 62 aa4.58□□□□□ -1.68
GTPBP3-201ENST00000324894 HMCN1Q96RW7 5635 aa4.57□□□□□ -1.68
GTPBP3-201ENST00000324894 KRTAP4-6Q9BYQ5 205 aa4.57□□□□□ -1.68
GTPBP3-201ENST00000324894 MT3P25713 68 aa4.56□□□□□ -1.68
GTPBP3-201ENST00000324894 OBSCNQ5VST9 7968 aa4.53□□□□□ -1.68
GTPBP3-201ENST00000324894 LCE3EQ5T5B0 92 aa4.53□□□□□ -1.68
GTPBP3-201ENST00000324894 LCE4AQ5TA78 99 aa4.52□□□□□ -1.69
GTPBP3-201ENST00000324894 LCE1DQ5T752 114 aa4.51□□□□□ -1.69
GTPBP3-201ENST00000324894 KRTAP20-2Q3LI61 65 aa4.38□□□□□ -1.71
GTPBP3-201ENST00000324894 KRTAP5-2Q701N4 177 aa4.32□□□□□ -1.72
GTPBP3-201ENST00000324894 KRTAP5-3Q6L8H2 238 aa4.2□□□□□ -1.74
GTPBP3-201ENST00000324894 LCE1EQ5T753 118 aa4.12□□□□□ -1.75
GTPBP3-201ENST00000324894 AHNAK2Q8IVF2 5795 aa4.08□□□□□ -1.76
GTPBP3-201ENST00000324894 GPR98Q8WXG9 6306 aa3.87□□□□□ -1.79
GTPBP3-201ENST00000324894 KRTAP4-11Q9BYQ6 195 aa3.82□□□□□ -1.8
GTPBP3-201ENST00000324894 KRTAP5-10Q6L8G5 202 aa3.8□□□□□ -1.8
GTPBP3-201ENST00000324894 KRTAP9-9Q9BYP9 154 aa3.73□□□□□ -1.81
GTPBP3-201ENST00000324894 MUC5ACP98088 5654 aa3.71□□□□□ -1.82
GTPBP3-201ENST00000324894 KRTAP5-1Q6L8H4 278 aa3.69□□□□□ -1.82
GTPBP3-201ENST00000324894 KRTAP5-8O75690 187 aa3.68□□□□□ -1.82
GTPBP3-201ENST00000324894 LCE1BQ5T7P3 118 aa3.67□□□□□ -1.82
GTPBP3-201ENST00000324894 KRTAP4-12Q9BQ66 201 aa3.66□□□□□ -1.82
GTPBP3-201ENST00000324894 KRTAP4-2Q9BYR5 136 aa3.63□□□□□ -1.83
GTPBP3-201ENST00000324894 LCE1CQ5T751 118 aa3.62□□□□□ -1.83
GTPBP3-201ENST00000324894 KRTAP5-7Q6L8G8 165 aa3.52□□□□□ -1.85
GTPBP3-201ENST00000324894 MUC5BQ9HC84 5762 aaPredicted RBP3.43□□□□□ -1.86
GTPBP3-201ENST00000324894 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.43□□□□□ -1.86
GTPBP3-201ENST00000324894 LCE1FQ5T754 118 aa3.31□□□□□ -1.88
GTPBP3-201ENST00000324894 KRTAP21-2Q3LI59 83 aa3.29□□□□□ -1.88
GTPBP3-201ENST00000324894 KRTAP5-11Q6L8G4 156 aa3.18□□□□□ -1.9
GTPBP3-201ENST00000324894 AHNAKQ09666 5890 aaKnown RBP3.09□□□□□ -1.92
GTPBP3-201ENST00000324894 MUC19Q7Z5P9 8384 aa3.08□□□□□ -1.92
GTPBP3-201ENST00000324894 KRTAP21-1Q3LI58 79 aa2.92□□□□□ -1.94
GTPBP3-201ENST00000324894 KRTAP4-4Q9BYR3 166 aa2.92□□□□□ -1.94
GTPBP3-201ENST00000324894 PHGR1C9JFL3 82 aa2.72□□□□□ -1.97
GTPBP3-201ENST00000324894 MUC16Q8WXI7 14507 aa1.81□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 176.4 ms