RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 SPRR2EP22531 72 aa5.52□□□□□ -1.53
SFXN1-201ENST00000321442 SPRR2BP35325 72 aa5.52□□□□□ -1.53
SFXN1-201ENST00000321442 SPRR2AP35326 72 aa5.52□□□□□ -1.53
SFXN1-201ENST00000321442 LCE3BQ5TA77 95 aa5.52□□□□□ -1.53
SFXN1-201ENST00000321442 MUC12Q9UKN1 5478 aa5.48□□□□□ -1.53
SFXN1-201ENST00000321442 KRTAP19-4Q3LI73 84 aa5.47□□□□□ -1.53
SFXN1-201ENST00000321442 SSPOA2VEC9 5147 aa5.44□□□□□ -1.54
SFXN1-201ENST00000321442 KRTAP4-3Q9BYR4 195 aa5.43□□□□□ -1.54
SFXN1-201ENST00000321442 KRTAP19-6Q3LI70 58 aa5.41□□□□□ -1.54
SFXN1-201ENST00000321442 MT1LQ93083 61 aa5.4□□□□□ -1.54
SFXN1-201ENST00000321442 MT1EP04732 61 aa5.39□□□□□ -1.55
SFXN1-201ENST00000321442 MACF1Q9UPN3 7388 aaKnown RBP5.34□□□□□ -1.56
SFXN1-201ENST00000321442 LCE2DQ5TA82 110 aaPredicted RBP5.33□□□□□ -1.56
SFXN1-201ENST00000321442 LOC100996750A0A140TA64 210 aa5.33□□□□□ -1.56
SFXN1-201ENST00000321442 KRTAP19-7Q3SYF9 63 aa5.32□□□□□ -1.56
SFXN1-201ENST00000321442 KRTAP19-3Q7Z4W3 81 aa5.3□□□□□ -1.56
SFXN1-201ENST00000321442 SPRR2DP22532 72 aa5.28□□□□□ -1.56
SFXN1-201ENST00000321442 KRTAP9-6A8MVA2 160 aa5.24□□□□□ -1.57
SFXN1-201ENST00000321442 LCE3DQ9BYE3 92 aa5.18□□□□□ -1.58
SFXN1-201ENST00000321442 MT1MQ8N339 61 aa5.17□□□□□ -1.58
SFXN1-201ENST00000321442 KRTAP2-3P0C7H8 128 aa5.1□□□□□ -1.59
SFXN1-201ENST00000321442 KRTAP2-4Q9BYR9 128 aa5.1□□□□□ -1.59
SFXN1-201ENST00000321442 KRTAP2-1Q9BYU5 128 aa5.1□□□□□ -1.59
SFXN1-201ENST00000321442 LCE3EQ5T5B0 92 aa5.09□□□□□ -1.59
SFXN1-201ENST00000321442 KRTAP9-6A0A140TA67 174 aa5.06□□□□□ -1.6
SFXN1-201ENST00000321442 KRTAP4-9Q9BYQ8 210 aa5.01□□□□□ -1.61
SFXN1-201ENST00000321442 MDN1Q9NU22 5596 aa4.91□□□□□ -1.62
SFXN1-201ENST00000321442 PRM1P04553 51 aa4.91□□□□□ -1.62
SFXN1-201ENST00000321442 MT4P47944 62 aa4.91□□□□□ -1.62
SFXN1-201ENST00000321442 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.84□□□□□ -1.63
SFXN1-201ENST00000321442 KRTAP9-7A8MTY7 169 aa4.81□□□□□ -1.64
SFXN1-201ENST00000321442 LCE1AQ5T7P2 110 aa4.79□□□□□ -1.64
SFXN1-201ENST00000321442 LCE5AQ5TCM9 118 aa4.76□□□□□ -1.65
SFXN1-201ENST00000321442 KRTAP6-1Q3LI64 71 aa4.64□□□□□ -1.67
SFXN1-201ENST00000321442 MT1AP04731 61 aa4.63□□□□□ -1.67
SFXN1-201ENST00000321442 KRTAP6-3Q3LI67 103 aa4.62□□□□□ -1.67
SFXN1-201ENST00000321442 MT3P25713 68 aa4.61□□□□□ -1.67
SFXN1-201ENST00000321442 KRTAP4-6Q9BYQ5 205 aa4.6□□□□□ -1.67
SFXN1-201ENST00000321442 KRTAP6-2Q3LI66 62 aa4.45□□□□□ -1.7
SFXN1-201ENST00000321442 NEBP20929 6669 aa4.45□□□□□ -1.7
SFXN1-201ENST00000321442 LCE1DQ5T752 114 aa4.43□□□□□ -1.7
SFXN1-201ENST00000321442 LCE1BQ5T7P3 118 aa4.39□□□□□ -1.71
SFXN1-201ENST00000321442 KRTAP20-1Q3LI63 56 aa4.38□□□□□ -1.71
SFXN1-201ENST00000321442 KRTAP5-9P26371 169 aa4.35□□□□□ -1.71
SFXN1-201ENST00000321442 MUC19Q7Z5P9 8384 aa4.27□□□□□ -1.73
SFXN1-201ENST00000321442 KRTAP9-4Q9BYQ2 154 aa4.26□□□□□ -1.73
SFXN1-201ENST00000321442 KRTAP2-2Q9BYT5 123 aa4.23□□□□□ -1.73
SFXN1-201ENST00000321442 LCE4AQ5TA78 99 aa4.05□□□□□ -1.76
SFXN1-201ENST00000321442 KRTAP5-5Q701N2 237 aaPredicted RBP3.93□□□□□ -1.78
SFXN1-201ENST00000321442 MUC5ACP98088 5654 aa3.92□□□□□ -1.78
SFXN1-201ENST00000321442 GPR98Q8WXG9 6306 aa3.9□□□□□ -1.78
SFXN1-201ENST00000321442 KRTAP20-2Q3LI61 65 aa3.87□□□□□ -1.79
SFXN1-201ENST00000321442 HMCN1Q96RW7 5635 aa3.79□□□□□ -1.8
SFXN1-201ENST00000321442 KRTAP9-9Q9BYP9 154 aa3.73□□□□□ -1.81
SFXN1-201ENST00000321442 KRTAP4-11Q9BYQ6 195 aa3.72□□□□□ -1.81
SFXN1-201ENST00000321442 KRTAP4-12Q9BQ66 201 aa3.68□□□□□ -1.82
SFXN1-201ENST00000321442 KRTAP4-2Q9BYR5 136 aa3.56□□□□□ -1.84
SFXN1-201ENST00000321442 LCE1EQ5T753 118 aa3.49□□□□□ -1.85
SFXN1-201ENST00000321442 KRTAP5-4Q6L8H1 288 aa3.49□□□□□ -1.85
SFXN1-201ENST00000321442 KRTAP5-3Q6L8H2 238 aa3.47□□□□□ -1.85
SFXN1-201ENST00000321442 LCE1CQ5T751 118 aa3.46□□□□□ -1.85
SFXN1-201ENST00000321442 LCE1FQ5T754 118 aa3.46□□□□□ -1.85
SFXN1-201ENST00000321442 KRTAP4-4Q9BYR3 166 aa3.4□□□□□ -1.86
SFXN1-201ENST00000321442 AHNAK2Q8IVF2 5795 aa3.4□□□□□ -1.87
SFXN1-201ENST00000321442 MUC5BQ9HC84 5762 aaPredicted RBP3.19□□□□□ -1.9
SFXN1-201ENST00000321442 KRTAP5-2Q701N4 177 aa3.11□□□□□ -1.91
SFXN1-201ENST00000321442 KRTAP5-8O75690 187 aa3.11□□□□□ -1.91
SFXN1-201ENST00000321442 KRTAP5-10Q6L8G5 202 aa2.98□□□□□ -1.93
SFXN1-201ENST00000321442 AHNAKQ09666 5890 aaKnown RBP2.88□□□□□ -1.95
SFXN1-201ENST00000321442 KRTAP5-1Q6L8H4 278 aa2.86□□□□□ -1.95
SFXN1-201ENST00000321442 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.66□□□□□ -1.98
SFXN1-201ENST00000321442 KRTAP21-2Q3LI59 83 aa2.61□□□□□ -1.99
SFXN1-201ENST00000321442 KRTAP5-11Q6L8G4 156 aa2.5□□□□□ -2.01
SFXN1-201ENST00000321442 KRTAP21-1Q3LI58 79 aa2.37□□□□□ -2.03
SFXN1-201ENST00000321442 PHGR1C9JFL3 82 aa2.29□□□□□ -2.04
SFXN1-201ENST00000321442 KRTAP5-7Q6L8G8 165 aa2.25□□□□□ -2.05
SFXN1-201ENST00000321442 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 13.2 ms