RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 KRTAP2-3P0C7H8 128 aa4.18□□□□□ -1.74
DNMT3A-202ENST00000321117 KRTAP2-4Q9BYR9 128 aa4.18□□□□□ -1.74
DNMT3A-202ENST00000321117 KRTAP2-1Q9BYU5 128 aa4.18□□□□□ -1.74
DNMT3A-202ENST00000321117 SPRR2FQ96RM1 72 aa4.17□□□□□ -1.74
DNMT3A-202ENST00000321117 LCE3BQ5TA77 95 aa4.09□□□□□ -1.75
DNMT3A-202ENST00000321117 LCE2AQ5TA79 106 aaPredicted RBP4.09□□□□□ -1.75
DNMT3A-202ENST00000321117 KRTAP19-3Q7Z4W3 81 aa4.06□□□□□ -1.76
DNMT3A-202ENST00000321117 KRTAP4-3Q9BYR4 195 aa4.04□□□□□ -1.76
DNMT3A-202ENST00000321117 KMT2DO14686 5537 aa4.02□□□□□ -1.77
DNMT3A-202ENST00000321117 MT1MQ8N339 61 aa4.01□□□□□ -1.77
DNMT3A-202ENST00000321117 USH2AO75445 5202 aa3.98□□□□□ -1.77
DNMT3A-202ENST00000321117 KRTAP19-6Q3LI70 58 aa3.98□□□□□ -1.77
DNMT3A-202ENST00000321117 LCE3DQ9BYE3 92 aa3.91□□□□□ -1.78
DNMT3A-202ENST00000321117 LCE3EQ5T5B0 92 aa3.87□□□□□ -1.79
DNMT3A-202ENST00000321117 DSTQ03001 7570 aaKnown RBP3.87□□□□□ -1.79
DNMT3A-202ENST00000321117 FCGBPQ9Y6R7 5405 aaPredicted RBP3.81□□□□□ -1.8
DNMT3A-202ENST00000321117 KRTAP9-2Q9BYQ4 174 aa3.78□□□□□ -1.8
DNMT3A-202ENST00000321117 KRTAP4-9Q9BYQ8 210 aa3.77□□□□□ -1.81
DNMT3A-202ENST00000321117 SPRR2EP22531 72 aa3.75□□□□□ -1.81
DNMT3A-202ENST00000321117 SPRR2BP35325 72 aa3.75□□□□□ -1.81
DNMT3A-202ENST00000321117 SPRR2AP35326 72 aa3.75□□□□□ -1.81
DNMT3A-202ENST00000321117 KRTAP9-6A0A140TA67 174 aa3.73□□□□□ -1.81
DNMT3A-202ENST00000321117 PRM1P04553 51 aa3.7□□□□□ -1.82
DNMT3A-202ENST00000321117 MT1AP04731 61 aa3.67□□□□□ -1.82
DNMT3A-202ENST00000321117 LCE5AQ5TCM9 118 aa3.67□□□□□ -1.82
DNMT3A-202ENST00000321117 SYNE2Q8WXH0 6885 aaKnown RBP3.66□□□□□ -1.82
DNMT3A-202ENST00000321117 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.65□□□□□ -1.82
DNMT3A-202ENST00000321117 MUC12Q9UKN1 5478 aa3.63□□□□□ -1.83
DNMT3A-202ENST00000321117 KRTAP6-1Q3LI64 71 aa3.63□□□□□ -1.83
DNMT3A-202ENST00000321117 SPRR2DP22532 72 aa3.62□□□□□ -1.83
DNMT3A-202ENST00000321117 SSPOA2VEC9 5147 aa3.61□□□□□ -1.83
DNMT3A-202ENST00000321117 LCE1DQ5T752 114 aa3.53□□□□□ -1.84
DNMT3A-202ENST00000321117 MT3P25713 68 aa3.52□□□□□ -1.85
DNMT3A-202ENST00000321117 MACF1Q9UPN3 7388 aaKnown RBP3.52□□□□□ -1.85
DNMT3A-202ENST00000321117 KRTAP9-7A8MTY7 169 aa3.5□□□□□ -1.85
DNMT3A-202ENST00000321117 KRTAP9-9Q9BYP9 154 aa3.46□□□□□ -1.86
DNMT3A-202ENST00000321117 KRTAP9-4Q9BYQ2 154 aa3.46□□□□□ -1.86
DNMT3A-202ENST00000321117 KRTAP6-2Q3LI66 62 aa3.42□□□□□ -1.86
DNMT3A-202ENST00000321117 LCE1AQ5T7P2 110 aa3.42□□□□□ -1.86
DNMT3A-202ENST00000321117 KRTAP4-12Q9BQ66 201 aa3.35□□□□□ -1.87
DNMT3A-202ENST00000321117 MT4P47944 62 aa3.34□□□□□ -1.87
DNMT3A-202ENST00000321117 LCE1BQ5T7P3 118 aa3.26□□□□□ -1.89
DNMT3A-202ENST00000321117 KRTAP5-3Q6L8H2 238 aa3.24□□□□□ -1.89
DNMT3A-202ENST00000321117 KRTAP5-5Q701N2 237 aaPredicted RBP3.22□□□□□ -1.89
DNMT3A-202ENST00000321117 MDN1Q9NU22 5596 aa3.21□□□□□ -1.9
DNMT3A-202ENST00000321117 KRTAP4-2Q9BYR5 136 aa3.21□□□□□ -1.9
DNMT3A-202ENST00000321117 KRTAP5-9P26371 169 aa3.17□□□□□ -1.9
DNMT3A-202ENST00000321117 KRTAP6-3Q3LI67 103 aa3.16□□□□□ -1.9
DNMT3A-202ENST00000321117 KRTAP4-11Q9BYQ6 195 aa3.16□□□□□ -1.9
DNMT3A-202ENST00000321117 MUC19Q7Z5P9 8384 aa3.14□□□□□ -1.91
DNMT3A-202ENST00000321117 KRTAP2-2Q9BYT5 123 aa3.13□□□□□ -1.91
DNMT3A-202ENST00000321117 LCE1EQ5T753 118 aa3.06□□□□□ -1.92
DNMT3A-202ENST00000321117 NEBP20929 6669 aa2.95□□□□□ -1.94
DNMT3A-202ENST00000321117 LCE4AQ5TA78 99 aa2.92□□□□□ -1.94
DNMT3A-202ENST00000321117 KRTAP20-1Q3LI63 56 aa2.87□□□□□ -1.95
DNMT3A-202ENST00000321117 LCE1FQ5T754 118 aa2.85□□□□□ -1.95
DNMT3A-202ENST00000321117 KRTAP20-2Q3LI61 65 aa2.79□□□□□ -1.96
DNMT3A-202ENST00000321117 GPR98Q8WXG9 6306 aa2.72□□□□□ -1.97
DNMT3A-202ENST00000321117 LCE1CQ5T751 118 aa2.7□□□□□ -1.98
DNMT3A-202ENST00000321117 KRTAP5-4Q6L8H1 288 aa2.69□□□□□ -1.98
DNMT3A-202ENST00000321117 MUC5ACP98088 5654 aa2.54□□□□□ -2
DNMT3A-202ENST00000321117 HMCN1Q96RW7 5635 aa2.53□□□□□ -2
DNMT3A-202ENST00000321117 KRTAP5-2Q701N4 177 aa2.5□□□□□ -2.01
DNMT3A-202ENST00000321117 KRTAP5-10Q6L8G5 202 aa2.45□□□□□ -2.02
DNMT3A-202ENST00000321117 KRTAP4-4Q9BYR3 166 aa2.37□□□□□ -2.03
DNMT3A-202ENST00000321117 AHNAK2Q8IVF2 5795 aa2.23□□□□□ -2.05
DNMT3A-202ENST00000321117 KRTAP5-1Q6L8H4 278 aa2.21□□□□□ -2.06
DNMT3A-202ENST00000321117 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
DNMT3A-202ENST00000321117 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.12□□□□□ -2.07
DNMT3A-202ENST00000321117 MUC5BQ9HC84 5762 aaPredicted RBP2.02□□□□□ -2.09
DNMT3A-202ENST00000321117 KRTAP21-1Q3LI58 79 aa2.01□□□□□ -2.09
DNMT3A-202ENST00000321117 KRTAP5-8O75690 187 aa2.01□□□□□ -2.09
DNMT3A-202ENST00000321117 KRTAP5-7Q6L8G8 165 aa2□□□□□ -2.09
DNMT3A-202ENST00000321117 KRTAP5-11Q6L8G4 156 aa1.99□□□□□ -2.09
DNMT3A-202ENST00000321117 AHNAKQ09666 5890 aaKnown RBP1.88□□□□□ -2.11
DNMT3A-202ENST00000321117 PHGR1C9JFL3 82 aa1.69□□□□□ -2.14
DNMT3A-202ENST00000321117 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 79.1 ms