RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 MT1EP04732 61 aa6.08□□□□□ -1.44
SSR4-201ENST00000320857 KRTAP19-4Q3LI73 84 aa6.08□□□□□ -1.44
SSR4-201ENST00000320857 MT1LQ93083 61 aa6.01□□□□□ -1.45
SSR4-201ENST00000320857 SPRR2FQ96RM1 72 aa5.99□□□□□ -1.45
SSR4-201ENST00000320857 MUC12Q9UKN1 5478 aa5.99□□□□□ -1.45
SSR4-201ENST00000320857 KRTAP5-9P26371 169 aa5.98□□□□□ -1.45
SSR4-201ENST00000320857 MDN1Q9NU22 5596 aa5.88□□□□□ -1.47
SSR4-201ENST00000320857 KRTAP4-7Q9BYR0 210 aa5.85□□□□□ -1.47
SSR4-201ENST00000320857 NEBP20929 6669 aa5.83□□□□□ -1.48
SSR4-201ENST00000320857 SPRR2EP22531 72 aa5.81□□□□□ -1.48
SSR4-201ENST00000320857 SPRR2BP35325 72 aa5.81□□□□□ -1.48
SSR4-201ENST00000320857 SPRR2AP35326 72 aa5.81□□□□□ -1.48
SSR4-201ENST00000320857 KRTAP19-3Q7Z4W3 81 aa5.79□□□□□ -1.48
SSR4-201ENST00000320857 MT1GP13640 62 aa5.77□□□□□ -1.49
SSR4-201ENST00000320857 KRTAP9-6A8MVA2 160 aa5.75□□□□□ -1.49
SSR4-201ENST00000320857 A0A0A0MQY5 61 aa5.75□□□□□ -1.49
SSR4-201ENST00000320857 LCE1AQ5T7P2 110 aa5.74□□□□□ -1.49
SSR4-201ENST00000320857 MT1MQ8N339 61 aa5.71□□□□□ -1.5
SSR4-201ENST00000320857 LCE5AQ5TCM9 118 aa5.67□□□□□ -1.5
SSR4-201ENST00000320857 SPRR2DP22532 72 aa5.6□□□□□ -1.51
SSR4-201ENST00000320857 KRTAP4-3Q9BYR4 195 aa5.6□□□□□ -1.51
SSR4-201ENST00000320857 KRTAP20-1Q3LI63 56 aa5.51□□□□□ -1.53
SSR4-201ENST00000320857 LOC100996750A0A140TA64 210 aa5.47□□□□□ -1.53
SSR4-201ENST00000320857 KRTAP2-3P0C7H8 128 aa5.47□□□□□ -1.53
SSR4-201ENST00000320857 KRTAP2-4Q9BYR9 128 aa5.47□□□□□ -1.53
SSR4-201ENST00000320857 KRTAP2-1Q9BYU5 128 aa5.47□□□□□ -1.53
SSR4-201ENST00000320857 LCE3BQ5TA77 95 aa5.41□□□□□ -1.54
SSR4-201ENST00000320857 DSTQ03001 7570 aaKnown RBP5.35□□□□□ -1.55
SSR4-201ENST00000320857 INE1O15225 51 aa5.32□□□□□ -1.56
SSR4-201ENST00000320857 KRTAP2-2Q9BYT5 123 aa5.31□□□□□ -1.56
SSR4-201ENST00000320857 KRTAP5-5Q701N2 237 aaPredicted RBP5.12□□□□□ -1.59
SSR4-201ENST00000320857 MT1AP04731 61 aa5.11□□□□□ -1.59
SSR4-201ENST00000320857 KRTAP6-1Q3LI64 71 aa5.05□□□□□ -1.6
SSR4-201ENST00000320857 KRTAP4-9Q9BYQ8 210 aa4.97□□□□□ -1.61
SSR4-201ENST00000320857 LCE4AQ5TA78 99 aa4.92□□□□□ -1.62
SSR4-201ENST00000320857 MT4P47944 62 aa4.9□□□□□ -1.62
SSR4-201ENST00000320857 KRTAP5-4Q6L8H1 288 aa4.89□□□□□ -1.63
SSR4-201ENST00000320857 LCE1DQ5T752 114 aa4.86□□□□□ -1.63
SSR4-201ENST00000320857 SYNE1Q8NF91 8797 aaKnown RBP4.84□□□□□ -1.63
SSR4-201ENST00000320857 KRTAP9-4Q9BYQ2 154 aa4.83□□□□□ -1.64
SSR4-201ENST00000320857 HMCN1Q96RW7 5635 aa4.79□□□□□ -1.64
SSR4-201ENST00000320857 KRTAP4-6Q9BYQ5 205 aa4.79□□□□□ -1.64
SSR4-201ENST00000320857 KRTAP12-4P60329 112 aa4.7□□□□□ -1.66
SSR4-201ENST00000320857 LCE3DQ9BYE3 92 aa4.64□□□□□ -1.67
SSR4-201ENST00000320857 MT3P25713 68 aa4.63□□□□□ -1.67
SSR4-201ENST00000320857 KRTAP20-2Q3LI61 65 aa4.63□□□□□ -1.67
SSR4-201ENST00000320857 KRTAP6-2Q3LI66 62 aa4.61□□□□□ -1.67
SSR4-201ENST00000320857 GPR98Q8WXG9 6306 aa4.6□□□□□ -1.67
SSR4-201ENST00000320857 LCE3EQ5T5B0 92 aa4.55□□□□□ -1.68
SSR4-201ENST00000320857 AHNAK2Q8IVF2 5795 aa4.47□□□□□ -1.69
SSR4-201ENST00000320857 KRTAP5-3Q6L8H2 238 aa4.45□□□□□ -1.7
SSR4-201ENST00000320857 KRTAP5-2Q701N4 177 aa4.4□□□□□ -1.71
SSR4-201ENST00000320857 KRTAP5-10Q6L8G5 202 aa4.26□□□□□ -1.73
SSR4-201ENST00000320857 OBSCNQ5VST9 7968 aa4.14□□□□□ -1.75
SSR4-201ENST00000320857 KRTAP4-11Q9BYQ6 195 aa4.12□□□□□ -1.75
SSR4-201ENST00000320857 PRM1P04553 51 aa4.1□□□□□ -1.75
SSR4-201ENST00000320857 KRTAP5-7Q6L8G8 165 aa4.04□□□□□ -1.76
SSR4-201ENST00000320857 KRTAP5-8O75690 187 aa3.97□□□□□ -1.77
SSR4-201ENST00000320857 LCE1EQ5T753 118 aa3.94□□□□□ -1.78
SSR4-201ENST00000320857 KRTAP5-1Q6L8H4 278 aa3.84□□□□□ -1.79
SSR4-201ENST00000320857 MUC5ACP98088 5654 aa3.78□□□□□ -1.8
SSR4-201ENST00000320857 LCE1BQ5T7P3 118 aa3.71□□□□□ -1.81
SSR4-201ENST00000320857 KRTAP9-9Q9BYP9 154 aa3.7□□□□□ -1.82
SSR4-201ENST00000320857 LCE1CQ5T751 118 aa3.68□□□□□ -1.82
SSR4-201ENST00000320857 KRTAP4-2Q9BYR5 136 aa3.68□□□□□ -1.82
SSR4-201ENST00000320857 MUC5BQ9HC84 5762 aaPredicted RBP3.62□□□□□ -1.83
SSR4-201ENST00000320857 AHNAKQ09666 5890 aaKnown RBP3.57□□□□□ -1.84
SSR4-201ENST00000320857 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.46□□□□□ -1.85
SSR4-201ENST00000320857 KRTAP21-2Q3LI59 83 aa3.29□□□□□ -1.88
SSR4-201ENST00000320857 KRTAP5-11Q6L8G4 156 aa3.23□□□□□ -1.89
SSR4-201ENST00000320857 KRTAP4-12Q9BQ66 201 aa3.19□□□□□ -1.9
SSR4-201ENST00000320857 LCE1FQ5T754 118 aa2.95□□□□□ -1.94
SSR4-201ENST00000320857 KRTAP4-4Q9BYR3 166 aa2.92□□□□□ -1.94
SSR4-201ENST00000320857 PHGR1C9JFL3 82 aa2.76□□□□□ -1.97
SSR4-201ENST00000320857 KRTAP21-1Q3LI58 79 aa2.54□□□□□ -2
SSR4-201ENST00000320857 MUC19Q7Z5P9 8384 aa2.46□□□□□ -2.01
SSR4-201ENST00000320857 MUC16Q8WXI7 14507 aa1.84□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 87.5 ms