RNA–Protein interactions for RNA: ENST00000320640.10

ITFG1-201, Transcript of integrin alpha FG-GAP repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITFG1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITFG1-201ENST00000320640 SYNE1Q8NF91 8797 aaKnown RBP5.01□□□□□ -1.61
ITFG1-201ENST00000320640 OBSCNQ5VST9 7968 aa4.99□□□□□ -1.61
ITFG1-201ENST00000320640 MT1LQ93083 61 aa4.97□□□□□ -1.61
ITFG1-201ENST00000320640 MT1GP13640 62 aa4.95□□□□□ -1.62
ITFG1-201ENST00000320640 MUC12Q9UKN1 5478 aa4.93□□□□□ -1.62
ITFG1-201ENST00000320640 KRTAP4-9Q9BYQ8 210 aa4.9□□□□□ -1.63
ITFG1-201ENST00000320640 MT1EP04732 61 aa4.86□□□□□ -1.63
ITFG1-201ENST00000320640 LCE3BQ5TA77 95 aa4.81□□□□□ -1.64
ITFG1-201ENST00000320640 SSPOA2VEC9 5147 aa4.74□□□□□ -1.65
ITFG1-201ENST00000320640 KRTAP9-7A8MTY7 169 aa4.71□□□□□ -1.66
ITFG1-201ENST00000320640 PRM1P04553 51 aa4.67□□□□□ -1.66
ITFG1-201ENST00000320640 KRTAP9-2Q9BYQ4 174 aa4.63□□□□□ -1.67
ITFG1-201ENST00000320640 SYNE2Q8WXH0 6885 aaKnown RBP4.55□□□□□ -1.68
ITFG1-201ENST00000320640 MT1MQ8N339 61 aa4.52□□□□□ -1.69
ITFG1-201ENST00000320640 LCE2DQ5TA82 110 aaPredicted RBP4.5□□□□□ -1.69
ITFG1-201ENST00000320640 KRTAP19-4Q3LI73 84 aa4.49□□□□□ -1.69
ITFG1-201ENST00000320640 LCE3DQ9BYE3 92 aa4.48□□□□□ -1.69
ITFG1-201ENST00000320640 KRTAP5-5Q701N2 237 aaPredicted RBP4.44□□□□□ -1.7
ITFG1-201ENST00000320640 LCE3EQ5T5B0 92 aa4.43□□□□□ -1.7
ITFG1-201ENST00000320640 KRTAP19-3Q7Z4W3 81 aa4.41□□□□□ -1.7
ITFG1-201ENST00000320640 KRTAP6-3Q3LI67 103 aa4.39□□□□□ -1.71
ITFG1-201ENST00000320640 LCE1AQ5T7P2 110 aa4.37□□□□□ -1.71
ITFG1-201ENST00000320640 KRTAP9-6A0A140TA67 174 aa4.36□□□□□ -1.71
ITFG1-201ENST00000320640 KRTAP6-1Q3LI64 71 aa4.34□□□□□ -1.71
ITFG1-201ENST00000320640 LCE2AQ5TA79 106 aaPredicted RBP4.28□□□□□ -1.72
ITFG1-201ENST00000320640 KRTAP6-2Q3LI66 62 aa4.28□□□□□ -1.72
ITFG1-201ENST00000320640 MT1AP04731 61 aa4.25□□□□□ -1.73
ITFG1-201ENST00000320640 SPRR2FQ96RM1 72 aa4.22□□□□□ -1.73
ITFG1-201ENST00000320640 MDN1Q9NU22 5596 aa4.21□□□□□ -1.74
ITFG1-201ENST00000320640 LCE1EQ5T753 118 aa4.15□□□□□ -1.74
ITFG1-201ENST00000320640 KRTAP2-2Q9BYT5 123 aa4.12□□□□□ -1.75
ITFG1-201ENST00000320640 LCE5AQ5TCM9 118 aa4.11□□□□□ -1.75
ITFG1-201ENST00000320640 MACF1Q9UPN3 7388 aaKnown RBP4.08□□□□□ -1.76
ITFG1-201ENST00000320640 KRTAP19-6Q3LI70 58 aa4.05□□□□□ -1.76
ITFG1-201ENST00000320640 LCE1DQ5T752 114 aa3.95□□□□□ -1.78
ITFG1-201ENST00000320640 KRTAP9-4Q9BYQ2 154 aa3.78□□□□□ -1.8
ITFG1-201ENST00000320640 MT3P25713 68 aa3.65□□□□□ -1.82
ITFG1-201ENST00000320640 MUC19Q7Z5P9 8384 aa3.62□□□□□ -1.83
ITFG1-201ENST00000320640 SPRR2EP22531 72 aa3.59□□□□□ -1.83
ITFG1-201ENST00000320640 SPRR2BP35325 72 aa3.59□□□□□ -1.83
ITFG1-201ENST00000320640 SPRR2AP35326 72 aa3.59□□□□□ -1.83
ITFG1-201ENST00000320640 KRTAP4-11Q9BYQ6 195 aa3.57□□□□□ -1.84
ITFG1-201ENST00000320640 SPRR2DP22532 72 aa3.44□□□□□ -1.86
ITFG1-201ENST00000320640 MUC5ACP98088 5654 aa3.37□□□□□ -1.87
ITFG1-201ENST00000320640 LCE1FQ5T754 118 aa3.31□□□□□ -1.88
ITFG1-201ENST00000320640 MT4P47944 62 aa3.23□□□□□ -1.89
ITFG1-201ENST00000320640 LCE1BQ5T7P3 118 aa3.23□□□□□ -1.89
ITFG1-201ENST00000320640 KRTAP4-6Q9BYQ5 205 aa3.22□□□□□ -1.89
ITFG1-201ENST00000320640 KRTAP5-9P26371 169 aa3.21□□□□□ -1.9
ITFG1-201ENST00000320640 KRTAP5-10Q6L8G5 202 aa3.1□□□□□ -1.91
ITFG1-201ENST00000320640 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.05□□□□□ -1.92
ITFG1-201ENST00000320640 KRTAP5-4Q6L8H1 288 aa3.02□□□□□ -1.93
ITFG1-201ENST00000320640 HMCN1Q96RW7 5635 aa2.99□□□□□ -1.93
ITFG1-201ENST00000320640 KRTAP20-2Q3LI61 65 aa2.92□□□□□ -1.94
ITFG1-201ENST00000320640 KRTAP4-4Q9BYR3 166 aa2.88□□□□□ -1.95
ITFG1-201ENST00000320640 NEBP20929 6669 aa2.84□□□□□ -1.96
ITFG1-201ENST00000320640 KRTAP5-1Q6L8H4 278 aa2.81□□□□□ -1.96
ITFG1-201ENST00000320640 KRTAP5-2Q701N4 177 aa2.8□□□□□ -1.96
ITFG1-201ENST00000320640 LCE1CQ5T751 118 aa2.79□□□□□ -1.96
ITFG1-201ENST00000320640 KRTAP5-3Q6L8H2 238 aa2.79□□□□□ -1.96
ITFG1-201ENST00000320640 KRTAP21-1Q3LI58 79 aa2.75□□□□□ -1.97
ITFG1-201ENST00000320640 KRTAP4-2Q9BYR5 136 aa2.66□□□□□ -1.98
ITFG1-201ENST00000320640 KRTAP21-2Q3LI59 83 aa2.65□□□□□ -1.99
ITFG1-201ENST00000320640 LCE4AQ5TA78 99 aa2.55□□□□□ -2
ITFG1-201ENST00000320640 KRTAP4-12Q9BQ66 201 aa2.52□□□□□ -2.01
ITFG1-201ENST00000320640 MUC5BQ9HC84 5762 aaPredicted RBP2.51□□□□□ -2.01
ITFG1-201ENST00000320640 KRTAP20-1Q3LI63 56 aa2.5□□□□□ -2.01
ITFG1-201ENST00000320640 KRTAP9-9Q9BYP9 154 aa2.46□□□□□ -2.02
ITFG1-201ENST00000320640 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.28□□□□□ -2.04
ITFG1-201ENST00000320640 AHNAK2Q8IVF2 5795 aa2.28□□□□□ -2.04
ITFG1-201ENST00000320640 KRTAP5-7Q6L8G8 165 aa2.13□□□□□ -2.07
ITFG1-201ENST00000320640 KRTAP5-8O75690 187 aa2.11□□□□□ -2.07
ITFG1-201ENST00000320640 KRTAP5-11Q6L8G4 156 aa2.08□□□□□ -2.08
ITFG1-201ENST00000320640 GPR98Q8WXG9 6306 aa2.04□□□□□ -2.08
ITFG1-201ENST00000320640 PHGR1C9JFL3 82 aa1.87□□□□□ -2.11
ITFG1-201ENST00000320640 AHNAKQ09666 5890 aaKnown RBP1.6□□□□□ -2.15
ITFG1-201ENST00000320640 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 52.6 ms