RNA–Protein interactions for RNA: ENST00000316341.7

SLC12A4-201, Transcript of solute carrier family 12 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC12A4, Length 4,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-201ENST00000316341 KRTAP19-7Q3SYF9 63 aa5.87□□□□□ -1.47
SLC12A4-201ENST00000316341 KRTAP9-6A8MVA2 160 aa5.86□□□□□ -1.47
SLC12A4-201ENST00000316341 USH2AO75445 5202 aa5.83□□□□□ -1.48
SLC12A4-201ENST00000316341 KRTAP19-3Q7Z4W3 81 aa5.78□□□□□ -1.48
SLC12A4-201ENST00000316341 FCGBPQ9Y6R7 5405 aaPredicted RBP5.76□□□□□ -1.49
SLC12A4-201ENST00000316341 LCE3DQ9BYE3 92 aa5.75□□□□□ -1.49
SLC12A4-201ENST00000316341 KRTAP2-3P0C7H8 128 aa5.73□□□□□ -1.49
SLC12A4-201ENST00000316341 KRTAP2-4Q9BYR9 128 aa5.73□□□□□ -1.49
SLC12A4-201ENST00000316341 KRTAP2-1Q9BYU5 128 aa5.73□□□□□ -1.49
SLC12A4-201ENST00000316341 DSTQ03001 7570 aaKnown RBP5.7□□□□□ -1.5
SLC12A4-201ENST00000316341 MT1MQ8N339 61 aa5.69□□□□□ -1.5
SLC12A4-201ENST00000316341 LCE3EQ5T5B0 92 aa5.66□□□□□ -1.5
SLC12A4-201ENST00000316341 SPRR2EP22531 72 aa5.61□□□□□ -1.51
SLC12A4-201ENST00000316341 SPRR2BP35325 72 aa5.61□□□□□ -1.51
SLC12A4-201ENST00000316341 SPRR2AP35326 72 aa5.61□□□□□ -1.51
SLC12A4-201ENST00000316341 KRTAP4-9Q9BYQ8 210 aa5.59□□□□□ -1.52
SLC12A4-201ENST00000316341 LCE2AQ5TA79 106 aaPredicted RBP5.55□□□□□ -1.52
SLC12A4-201ENST00000316341 SYNE2Q8WXH0 6885 aaKnown RBP5.53□□□□□ -1.52
SLC12A4-201ENST00000316341 PRM1P04553 51 aa5.48□□□□□ -1.53
SLC12A4-201ENST00000316341 KRTAP19-6Q3LI70 58 aa5.48□□□□□ -1.53
SLC12A4-201ENST00000316341 SPRR2DP22532 72 aa5.36□□□□□ -1.55
SLC12A4-201ENST00000316341 MUC12Q9UKN1 5478 aa5.31□□□□□ -1.56
SLC12A4-201ENST00000316341 LCE2DQ5TA82 110 aaPredicted RBP5.2□□□□□ -1.58
SLC12A4-201ENST00000316341 KRTAP6-1Q3LI64 71 aa5.17□□□□□ -1.58
SLC12A4-201ENST00000316341 MT1AP04731 61 aa5.17□□□□□ -1.58
SLC12A4-201ENST00000316341 MT3P25713 68 aa5.11□□□□□ -1.59
SLC12A4-201ENST00000316341 KRTAP9-7A8MTY7 169 aa5.1□□□□□ -1.59
SLC12A4-201ENST00000316341 SSPOA2VEC9 5147 aa5.07□□□□□ -1.6
SLC12A4-201ENST00000316341 LCE5AQ5TCM9 118 aa5.07□□□□□ -1.6
SLC12A4-201ENST00000316341 KRTAP9-2Q9BYQ4 174 aa4.99□□□□□ -1.61
SLC12A4-201ENST00000316341 KRTAP6-2Q3LI66 62 aa4.97□□□□□ -1.61
SLC12A4-201ENST00000316341 MT4P47944 62 aa4.93□□□□□ -1.62
SLC12A4-201ENST00000316341 MACF1Q9UPN3 7388 aaKnown RBP4.87□□□□□ -1.63
SLC12A4-201ENST00000316341 LCE1AQ5T7P2 110 aa4.79□□□□□ -1.64
SLC12A4-201ENST00000316341 LCE1DQ5T752 114 aa4.79□□□□□ -1.64
SLC12A4-201ENST00000316341 KRTAP9-4Q9BYQ2 154 aa4.78□□□□□ -1.64
SLC12A4-201ENST00000316341 LCE1BQ5T7P3 118 aa4.76□□□□□ -1.65
SLC12A4-201ENST00000316341 KRTAP9-6A0A140TA67 174 aa4.57□□□□□ -1.68
SLC12A4-201ENST00000316341 KRTAP2-2Q9BYT5 123 aa4.49□□□□□ -1.69
SLC12A4-201ENST00000316341 MDN1Q9NU22 5596 aa4.46□□□□□ -1.7
SLC12A4-201ENST00000316341 KRTAP5-5Q701N2 237 aaPredicted RBP4.43□□□□□ -1.7
SLC12A4-201ENST00000316341 KRTAP6-3Q3LI67 103 aa4.41□□□□□ -1.7
SLC12A4-201ENST00000316341 MUC19Q7Z5P9 8384 aa4.35□□□□□ -1.71
SLC12A4-201ENST00000316341 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.28□□□□□ -1.72
SLC12A4-201ENST00000316341 KRTAP5-9P26371 169 aa4.22□□□□□ -1.73
SLC12A4-201ENST00000316341 KRTAP4-6Q9BYQ5 205 aa4.15□□□□□ -1.74
SLC12A4-201ENST00000316341 KRTAP4-11Q9BYQ6 195 aa4.14□□□□□ -1.75
SLC12A4-201ENST00000316341 LCE4AQ5TA78 99 aa4.1□□□□□ -1.75
SLC12A4-201ENST00000316341 NEBP20929 6669 aa3.98□□□□□ -1.77
SLC12A4-201ENST00000316341 KRTAP20-2Q3LI61 65 aa3.92□□□□□ -1.78
SLC12A4-201ENST00000316341 LCE1EQ5T753 118 aa3.91□□□□□ -1.78
SLC12A4-201ENST00000316341 KRTAP20-1Q3LI63 56 aa3.9□□□□□ -1.78
SLC12A4-201ENST00000316341 MUC5ACP98088 5654 aa3.81□□□□□ -1.8
SLC12A4-201ENST00000316341 KRTAP4-4Q9BYR3 166 aa3.69□□□□□ -1.82
SLC12A4-201ENST00000316341 LCE1CQ5T751 118 aa3.67□□□□□ -1.82
SLC12A4-201ENST00000316341 LCE1FQ5T754 118 aa3.67□□□□□ -1.82
SLC12A4-201ENST00000316341 HMCN1Q96RW7 5635 aa3.6□□□□□ -1.83
SLC12A4-201ENST00000316341 KRTAP5-4Q6L8H1 288 aa3.59□□□□□ -1.83
SLC12A4-201ENST00000316341 KRTAP4-12Q9BQ66 201 aa3.45□□□□□ -1.86
SLC12A4-201ENST00000316341 KRTAP4-2Q9BYR5 136 aa3.45□□□□□ -1.86
SLC12A4-201ENST00000316341 KRTAP5-10Q6L8G5 202 aa3.35□□□□□ -1.87
SLC12A4-201ENST00000316341 GPR98Q8WXG9 6306 aa3.3□□□□□ -1.88
SLC12A4-201ENST00000316341 KRTAP9-9Q9BYP9 154 aa3.27□□□□□ -1.89
SLC12A4-201ENST00000316341 KRTAP5-2Q701N4 177 aa3.21□□□□□ -1.9
SLC12A4-201ENST00000316341 KRTAP5-3Q6L8H2 238 aa3.13□□□□□ -1.91
SLC12A4-201ENST00000316341 AHNAK2Q8IVF2 5795 aa3.1□□□□□ -1.91
SLC12A4-201ENST00000316341 KRTAP21-2Q3LI59 83 aa2.88□□□□□ -1.95
SLC12A4-201ENST00000316341 KRTAP5-1Q6L8H4 278 aa2.88□□□□□ -1.95
SLC12A4-201ENST00000316341 KRTAP5-8O75690 187 aa2.88□□□□□ -1.95
SLC12A4-201ENST00000316341 MUC5BQ9HC84 5762 aaPredicted RBP2.8□□□□□ -1.96
SLC12A4-201ENST00000316341 KRTAP21-1Q3LI58 79 aa2.72□□□□□ -1.97
SLC12A4-201ENST00000316341 KRTAP5-11Q6L8G4 156 aa2.65□□□□□ -1.99
SLC12A4-201ENST00000316341 AHNAKQ09666 5890 aaKnown RBP2.61□□□□□ -1.99
SLC12A4-201ENST00000316341 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.56□□□□□ -2
SLC12A4-201ENST00000316341 KRTAP5-7Q6L8G8 165 aa2.31□□□□□ -2.04
SLC12A4-201ENST00000316341 PHGR1C9JFL3 82 aa2.28□□□□□ -2.04
SLC12A4-201ENST00000316341 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 79.5 ms