RNA–Protein interactions for RNA: ENST00000314595.5

POLR2B-201, Transcript of RNA polymerase II subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2B, Length 3,748 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-201ENST00000314595 MDN1Q9NU22 5596 aa1.89□□□□□ -2.11
POLR2B-201ENST00000314595 LCE1AQ5T7P2 110 aa1.88□□□□□ -2.11
POLR2B-201ENST00000314595 PP632Q6XCG6 107 aa1.88□□□□□ -2.11
POLR2B-201ENST00000314595 KRTAP10-5P60370 271 aa1.87□□□□□ -2.11
POLR2B-201ENST00000314595 KRTAP4-11Q9BYQ6 195 aa1.87□□□□□ -2.11
POLR2B-201ENST00000314595 PRO2289Q9P1D8 64 aa1.86□□□□□ -2.11
POLR2B-201ENST00000314595 KRTAP19-8Q3LI54 63 aa1.84□□□□□ -2.11
POLR2B-201ENST00000314595 KRTAP19-4Q3LI73 84 aa1.84□□□□□ -2.12
POLR2B-201ENST00000314595 A0A0D9SG42 100 aa1.83□□□□□ -2.12
POLR2B-201ENST00000314595 KRTAP5-7Q6L8G8 165 aa1.83□□□□□ -2.12
POLR2B-201ENST00000314595 LCE4AQ5TA78 99 aa1.82□□□□□ -2.12
POLR2B-201ENST00000314595 INE1O15225 51 aa1.81□□□□□ -2.12
POLR2B-201ENST00000314595 SPRR2EP22531 72 aa1.81□□□□□ -2.12
POLR2B-201ENST00000314595 SPRR2BP35325 72 aa1.81□□□□□ -2.12
POLR2B-201ENST00000314595 SPRR2AP35326 72 aa1.81□□□□□ -2.12
POLR2B-201ENST00000314595 C9orf92A6NGG3 77 aa1.81□□□□□ -2.12
POLR2B-201ENST00000314595 CAMK2N1Q7Z7J9 78 aa1.8□□□□□ -2.12
POLR2B-201ENST00000314595 MT1BP07438 61 aa1.8□□□□□ -2.12
POLR2B-201ENST00000314595 KRTAP5-10Q6L8G5 202 aa1.8□□□□□ -2.12
POLR2B-201ENST00000314595 OBSCNQ5VST9 7968 aa1.79□□□□□ -2.12
POLR2B-201ENST00000314595 KRTAP5-3Q6L8H2 238 aa1.79□□□□□ -2.12
POLR2B-201ENST00000314595 SPRR2DP22532 72 aa1.78□□□□□ -2.13
POLR2B-201ENST00000314595 SPRR2GQ9BYE4 73 aa1.78□□□□□ -2.13
POLR2B-201ENST00000314595 LCE5AQ5TCM9 118 aa1.77□□□□□ -2.13
POLR2B-201ENST00000314595 AHNAK2Q8IVF2 5795 aa1.76□□□□□ -2.13
POLR2B-201ENST00000314595 MUC5BQ9HC84 5762 aaPredicted RBP1.74□□□□□ -2.13
POLR2B-201ENST00000314595 SPRR2FQ96RM1 72 aa1.73□□□□□ -2.13
POLR2B-201ENST00000314595 HMCN1Q96RW7 5635 aa1.72□□□□□ -2.13
POLR2B-201ENST00000314595 KRTAP10-12P60413 245 aa1.7□□□□□ -2.14
POLR2B-201ENST00000314595 R4GN34 69 aa1.69□□□□□ -2.14
POLR2B-201ENST00000314595 KRTAP8-1Q8IUC2 63 aa1.67□□□□□ -2.14
POLR2B-201ENST00000314595 AHNAKQ09666 5890 aaKnown RBP1.67□□□□□ -2.14
POLR2B-201ENST00000314595 KRTAP5-4Q6L8H1 288 aa1.65□□□□□ -2.15
POLR2B-201ENST00000314595 TNP1P09430 55 aa1.63□□□□□ -2.15
POLR2B-201ENST00000314595 MT1XP80297 61 aa1.61□□□□□ -2.15
POLR2B-201ENST00000314595 LCE3AQ5TA76 89 aa1.59□□□□□ -2.16
POLR2B-201ENST00000314595 KRTAP10-7P60409 375 aaPredicted RBP1.54□□□□□ -2.16
POLR2B-201ENST00000314595 MUC5ACP98088 5654 aa1.52□□□□□ -2.17
POLR2B-201ENST00000314595 KRTAP9-6A8MVA2 160 aa1.51□□□□□ -2.17
POLR2B-201ENST00000314595 KRTAP19-5Q3LI72 72 aa1.51□□□□□ -2.17
POLR2B-201ENST00000314595 KRTAP19-3Q7Z4W3 81 aa1.51□□□□□ -2.17
POLR2B-201ENST00000314595 LCE3CQ5T5A8 94 aa1.49□□□□□ -2.17
POLR2B-201ENST00000314595 KRTAP12-3P60328 96 aa1.48□□□□□ -2.17
POLR2B-201ENST00000314595 KRTAP20-2Q3LI61 65 aa1.47□□□□□ -2.17
POLR2B-201ENST00000314595 MT4P47944 62 aa1.47□□□□□ -2.17
POLR2B-201ENST00000314595 MT1EP04732 61 aa1.46□□□□□ -2.18
POLR2B-201ENST00000314595 MT1GP13640 62 aa1.46□□□□□ -2.18
POLR2B-201ENST00000314595 KRTAP19-7Q3SYF9 63 aa1.45□□□□□ -2.18
POLR2B-201ENST00000314595 KRTAP5-5Q701N2 237 aaPredicted RBP1.42□□□□□ -2.18
POLR2B-201ENST00000314595 MUC19Q7Z5P9 8384 aa1.42□□□□□ -2.18
POLR2B-201ENST00000314595 KRTAP5-2Q701N4 177 aa1.41□□□□□ -2.18
POLR2B-201ENST00000314595 DSTQ03001 7570 aaKnown RBP1.41□□□□□ -2.18
POLR2B-201ENST00000314595 KRTAP5-8O75690 187 aa1.4□□□□□ -2.19
POLR2B-201ENST00000314595 MT1MQ8N339 61 aa1.4□□□□□ -2.19
POLR2B-201ENST00000314595 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.34□□□□□ -2.19
POLR2B-201ENST00000314595 KRTAP12-4P60329 112 aa1.33□□□□□ -2.2
POLR2B-201ENST00000314595 MT1LQ93083 61 aa1.33□□□□□ -2.2
POLR2B-201ENST00000314595 MT1AP04731 61 aa1.32□□□□□ -2.2
POLR2B-201ENST00000314595 LCE1FQ5T754 118 aa1.31□□□□□ -2.2
POLR2B-201ENST00000314595 KRTAP5-1Q6L8H4 278 aa1.25□□□□□ -2.21
POLR2B-201ENST00000314595 LCE1EQ5T753 118 aa1.25□□□□□ -2.21
POLR2B-201ENST00000314595 LCE3EQ5T5B0 92 aa1.24□□□□□ -2.21
POLR2B-201ENST00000314595 KRTAP5-11Q6L8G4 156 aa1.22□□□□□ -2.21
POLR2B-201ENST00000314595 KRTAP4-3Q9BYR4 195 aa1.22□□□□□ -2.21
POLR2B-201ENST00000314595 MT3P25713 68 aa1.16□□□□□ -2.22
POLR2B-201ENST00000314595 LCE3DQ9BYE3 92 aa1.15□□□□□ -2.23
POLR2B-201ENST00000314595 SYNE1Q8NF91 8797 aaKnown RBP1.14□□□□□ -2.23
POLR2B-201ENST00000314595 PRM1P04553 51 aa1.14□□□□□ -2.23
POLR2B-201ENST00000314595 KRTAP6-1Q3LI64 71 aa1.09□□□□□ -2.23
POLR2B-201ENST00000314595 KRTAP6-2Q3LI66 62 aa1.09□□□□□ -2.24
POLR2B-201ENST00000314595 KRTAP4-4Q9BYR3 166 aa1.07□□□□□ -2.24
POLR2B-201ENST00000314595 LCE1CQ5T751 118 aa1.06□□□□□ -2.24
POLR2B-201ENST00000314595 LCE1BQ5T7P3 118 aa1.06□□□□□ -2.24
POLR2B-201ENST00000314595 PHGR1C9JFL3 82 aa0.95□□□□□ -2.26
POLR2B-201ENST00000314595 KRTAP21-1Q3LI58 79 aa0.91□□□□□ -2.26
POLR2B-201ENST00000314595 KRTAP21-2Q3LI59 83 aa0.79□□□□□ -2.28
POLR2B-201ENST00000314595 MUC16Q8WXI7 14507 aa0.63□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 48.1 ms