RNA–Protein interactions for RNA: ENST00000313071.6

FOXG1-201, Transcript of forkhead box G1, humanhuman

APPRIS P1 BASIC

Gene FOXG1, Length 4,890 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1-201ENST00000313071 KRTAP19-7Q3SYF9 63 aa7.45□□□□□ -1.22
FOXG1-201ENST00000313071 TNXBP22105 4242 aa7.4□□□□□ -1.22
FOXG1-201ENST00000313071 LCE2AQ5TA79 106 aaPredicted RBP7.4□□□□□ -1.23
FOXG1-201ENST00000313071 LOC100996750A0A140TA64 210 aa7.39□□□□□ -1.23
FOXG1-201ENST00000313071 PRM1P04553 51 aa7.36□□□□□ -1.23
FOXG1-201ENST00000313071 KRTAP4-3Q9BYR4 195 aa7.35□□□□□ -1.23
FOXG1-201ENST00000313071 RNF213Q63HN8 5207 aa7.34□□□□□ -1.23
FOXG1-201ENST00000313071 MT1AP04731 61 aa7.33□□□□□ -1.24
FOXG1-201ENST00000313071 UBR4Q5T4S7 5183 aa7.31□□□□□ -1.24
FOXG1-201ENST00000313071 KRTAP9-2Q9BYQ4 174 aa7.3□□□□□ -1.24
FOXG1-201ENST00000313071 MT4P47944 62 aa7.28□□□□□ -1.24
FOXG1-201ENST00000313071 FAT4Q6V0I7 4981 aa7.26□□□□□ -1.25
FOXG1-201ENST00000313071 KRTAP2-3P0C7H8 128 aa7.23□□□□□ -1.25
FOXG1-201ENST00000313071 KRTAP2-4Q9BYR9 128 aa7.23□□□□□ -1.25
FOXG1-201ENST00000313071 KRTAP2-1Q9BYU5 128 aa7.23□□□□□ -1.25
FOXG1-201ENST00000313071 HMCN2Q8NDA2 5059 aa7.16□□□□□ -1.26
FOXG1-201ENST00000313071 LCE1DQ5T752 114 aa7.09□□□□□ -1.27
FOXG1-201ENST00000313071 LCE1BQ5T7P3 118 aa7.09□□□□□ -1.27
FOXG1-201ENST00000313071 LCE1AQ5T7P2 110 aa7.02□□□□□ -1.29
FOXG1-201ENST00000313071 FSIP2Q5CZC0 6907 aa7.02□□□□□ -1.29
FOXG1-201ENST00000313071 OBSCNQ5VST9 7968 aa7.02□□□□□ -1.29
FOXG1-201ENST00000313071 MUC2Q02817 5179 aa6.96□□□□□ -1.3
FOXG1-201ENST00000313071 KRTAP4-9Q9BYQ8 210 aa6.87□□□□□ -1.31
FOXG1-201ENST00000313071 KRTAP9-6A0A140TA67 174 aa6.86□□□□□ -1.31
FOXG1-201ENST00000313071 KRTAP9-6A8MVA2 160 aa6.78□□□□□ -1.32
FOXG1-201ENST00000313071 LCE5AQ5TCM9 118 aa6.77□□□□□ -1.33
FOXG1-201ENST00000313071 KRTAP6-3Q3LI67 103 aa6.75□□□□□ -1.33
FOXG1-201ENST00000313071 KRTAP6-1Q3LI64 71 aa6.72□□□□□ -1.33
FOXG1-201ENST00000313071 KRTAP9-4Q9BYQ2 154 aa6.67□□□□□ -1.34
FOXG1-201ENST00000313071 KRTAP20-1Q3LI63 56 aa6.62□□□□□ -1.35
FOXG1-201ENST00000313071 KRTAP6-2Q3LI66 62 aa6.62□□□□□ -1.35
FOXG1-201ENST00000313071 LCE4AQ5TA78 99 aa6.58□□□□□ -1.36
FOXG1-201ENST00000313071 SYNE2Q8WXH0 6885 aaKnown RBP6.57□□□□□ -1.36
FOXG1-201ENST00000313071 KRTAP9-7A8MTY7 169 aa6.55□□□□□ -1.36
FOXG1-201ENST00000313071 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.37□□□□□ -1.39
FOXG1-201ENST00000313071 KRTAP2-2Q9BYT5 123 aa6.35□□□□□ -1.39
FOXG1-201ENST00000313071 USH2AO75445 5202 aa6.3□□□□□ -1.4
FOXG1-201ENST00000313071 FCGBPQ9Y6R7 5405 aaPredicted RBP6.25□□□□□ -1.41
FOXG1-201ENST00000313071 DSTQ03001 7570 aaKnown RBP6.1□□□□□ -1.43
FOXG1-201ENST00000313071 LCE1CQ5T751 118 aa5.96□□□□□ -1.45
FOXG1-201ENST00000313071 LCE1EQ5T753 118 aa5.96□□□□□ -1.45
FOXG1-201ENST00000313071 LCE1FQ5T754 118 aa5.96□□□□□ -1.45
FOXG1-201ENST00000313071 MACF1Q9UPN3 7388 aaKnown RBP5.91□□□□□ -1.46
FOXG1-201ENST00000313071 KRTAP5-9P26371 169 aa5.83□□□□□ -1.48
FOXG1-201ENST00000313071 KMT2DO14686 5537 aa5.72□□□□□ -1.49
FOXG1-201ENST00000313071 MUC19Q7Z5P9 8384 aa5.71□□□□□ -1.5
FOXG1-201ENST00000313071 KRTAP9-9Q9BYP9 154 aa5.6□□□□□ -1.51
FOXG1-201ENST00000313071 NEBP20929 6669 aa5.58□□□□□ -1.52
FOXG1-201ENST00000313071 SSPOA2VEC9 5147 aa5.55□□□□□ -1.52
FOXG1-201ENST00000313071 MDN1Q9NU22 5596 aa5.5□□□□□ -1.53
FOXG1-201ENST00000313071 KRTAP20-2Q3LI61 65 aa5.48□□□□□ -1.53
FOXG1-201ENST00000313071 KRTAP4-6Q9BYQ5 205 aa5.44□□□□□ -1.54
FOXG1-201ENST00000313071 MUC12Q9UKN1 5478 aa5.41□□□□□ -1.54
FOXG1-201ENST00000313071 KRTAP4-11Q9BYQ6 195 aa5.37□□□□□ -1.55
FOXG1-201ENST00000313071 GPR98Q8WXG9 6306 aa5.31□□□□□ -1.56
FOXG1-201ENST00000313071 KRTAP5-4Q6L8H1 288 aa5.09□□□□□ -1.59
FOXG1-201ENST00000313071 KRTAP5-5Q701N2 237 aaPredicted RBP5.03□□□□□ -1.6
FOXG1-201ENST00000313071 KRTAP4-4Q9BYR3 166 aa4.84□□□□□ -1.63
FOXG1-201ENST00000313071 KRTAP4-12Q9BQ66 201 aa4.76□□□□□ -1.65
FOXG1-201ENST00000313071 KRTAP4-2Q9BYR5 136 aa4.76□□□□□ -1.65
FOXG1-201ENST00000313071 MUC5ACP98088 5654 aa4.58□□□□□ -1.68
FOXG1-201ENST00000313071 KRTAP5-3Q6L8H2 238 aa4.48□□□□□ -1.69
FOXG1-201ENST00000313071 HMCN1Q96RW7 5635 aa4.46□□□□□ -1.7
FOXG1-201ENST00000313071 AHNAK2Q8IVF2 5795 aa4.37□□□□□ -1.71
FOXG1-201ENST00000313071 KRTAP5-10Q6L8G5 202 aa4.11□□□□□ -1.75
FOXG1-201ENST00000313071 KRTAP5-2Q701N4 177 aa4.07□□□□□ -1.76
FOXG1-201ENST00000313071 KRTAP5-8O75690 187 aa4□□□□□ -1.77
FOXG1-201ENST00000313071 MUC5BQ9HC84 5762 aaPredicted RBP3.78□□□□□ -1.8
FOXG1-201ENST00000313071 KRTAP5-11Q6L8G4 156 aa3.73□□□□□ -1.81
FOXG1-201ENST00000313071 AHNAKQ09666 5890 aaKnown RBP3.65□□□□□ -1.83
FOXG1-201ENST00000313071 KRTAP5-1Q6L8H4 278 aa3.56□□□□□ -1.84
FOXG1-201ENST00000313071 PHGR1C9JFL3 82 aa3.54□□□□□ -1.84
FOXG1-201ENST00000313071 KRTAP21-2Q3LI59 83 aa3.47□□□□□ -1.85
FOXG1-201ENST00000313071 KRTAP5-7Q6L8G8 165 aa3.38□□□□□ -1.87
FOXG1-201ENST00000313071 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.34□□□□□ -1.88
FOXG1-201ENST00000313071 KRTAP21-1Q3LI58 79 aa3.22□□□□□ -1.89
FOXG1-201ENST00000313071 MUC16Q8WXI7 14507 aa2.19□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 6.6 ms