RNA–Protein interactions for RNA: ENST00000312912.9

KDM3A-201, Transcript of lysine demethylase 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3A, Length 4,886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-201ENST00000312912 KRTAP4-7Q9BYR0 210 aa4.94□□□□□ -1.62
KDM3A-201ENST00000312912 TNXBP22105 4242 aa4.93□□□□□ -1.62
KDM3A-201ENST00000312912 RNF213Q63HN8 5207 aa4.86□□□□□ -1.63
KDM3A-201ENST00000312912 FLGP20930 4061 aaPredicted RBP4.86□□□□□ -1.63
KDM3A-201ENST00000312912 PRM1P04553 51 aa4.82□□□□□ -1.64
KDM3A-201ENST00000312912 FAT4Q6V0I7 4981 aa4.8□□□□□ -1.64
KDM3A-201ENST00000312912 MT1MQ8N339 61 aa4.79□□□□□ -1.64
KDM3A-201ENST00000312912 KRTAP9-7A8MTY7 169 aa4.75□□□□□ -1.65
KDM3A-201ENST00000312912 FSIP2Q5CZC0 6907 aa4.72□□□□□ -1.65
KDM3A-201ENST00000312912 MT3P25713 68 aa4.68□□□□□ -1.66
KDM3A-201ENST00000312912 HMCN2Q8NDA2 5059 aa4.67□□□□□ -1.66
KDM3A-201ENST00000312912 KRTAP2-3P0C7H8 128 aa4.66□□□□□ -1.66
KDM3A-201ENST00000312912 KRTAP2-4Q9BYR9 128 aa4.66□□□□□ -1.66
KDM3A-201ENST00000312912 KRTAP2-1Q9BYU5 128 aa4.66□□□□□ -1.66
KDM3A-201ENST00000312912 KRTAP20-1Q3LI63 56 aa4.66□□□□□ -1.66
KDM3A-201ENST00000312912 KRTAP19-7Q3SYF9 63 aa4.65□□□□□ -1.66
KDM3A-201ENST00000312912 KRTAP6-3Q3LI67 103 aa4.65□□□□□ -1.67
KDM3A-201ENST00000312912 LOC100996750A0A140TA64 210 aa4.6□□□□□ -1.67
KDM3A-201ENST00000312912 MT4P47944 62 aa4.6□□□□□ -1.67
KDM3A-201ENST00000312912 KRTAP4-3Q9BYR4 195 aa4.58□□□□□ -1.68
KDM3A-201ENST00000312912 MUC2Q02817 5179 aa4.56□□□□□ -1.68
KDM3A-201ENST00000312912 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.55□□□□□ -1.68
KDM3A-201ENST00000312912 LCE1AQ5T7P2 110 aa4.55□□□□□ -1.68
KDM3A-201ENST00000312912 SYNE2Q8WXH0 6885 aaKnown RBP4.51□□□□□ -1.69
KDM3A-201ENST00000312912 MT1AP04731 61 aa4.49□□□□□ -1.69
KDM3A-201ENST00000312912 OBSCNQ5VST9 7968 aa4.47□□□□□ -1.69
KDM3A-201ENST00000312912 KRTAP2-2Q9BYT5 123 aa4.36□□□□□ -1.71
KDM3A-201ENST00000312912 KRTAP9-6A8MVA2 160 aa4.31□□□□□ -1.72
KDM3A-201ENST00000312912 LCE1BQ5T7P3 118 aa4.31□□□□□ -1.72
KDM3A-201ENST00000312912 KRTAP4-9Q9BYQ8 210 aa4.31□□□□□ -1.72
KDM3A-201ENST00000312912 LCE1DQ5T752 114 aa4.3□□□□□ -1.72
KDM3A-201ENST00000312912 LCE4AQ5TA78 99 aa4.28□□□□□ -1.72
KDM3A-201ENST00000312912 LCE5AQ5TCM9 118 aa4.18□□□□□ -1.74
KDM3A-201ENST00000312912 KRTAP6-1Q3LI64 71 aa4.17□□□□□ -1.74
KDM3A-201ENST00000312912 KRTAP6-2Q3LI66 62 aa4.16□□□□□ -1.74
KDM3A-201ENST00000312912 KRTAP9-4Q9BYQ2 154 aa4.09□□□□□ -1.75
KDM3A-201ENST00000312912 FCGBPQ9Y6R7 5405 aaPredicted RBP4.09□□□□□ -1.76
KDM3A-201ENST00000312912 USH2AO75445 5202 aa4.03□□□□□ -1.76
KDM3A-201ENST00000312912 MACF1Q9UPN3 7388 aaKnown RBP4□□□□□ -1.77
KDM3A-201ENST00000312912 NEBP20929 6669 aa3.94□□□□□ -1.78
KDM3A-201ENST00000312912 KRTAP5-9P26371 169 aa3.94□□□□□ -1.78
KDM3A-201ENST00000312912 DSTQ03001 7570 aaKnown RBP3.93□□□□□ -1.78
KDM3A-201ENST00000312912 KMT2DO14686 5537 aa3.89□□□□□ -1.79
KDM3A-201ENST00000312912 SSPOA2VEC9 5147 aa3.86□□□□□ -1.79
KDM3A-201ENST00000312912 GPR98Q8WXG9 6306 aa3.82□□□□□ -1.8
KDM3A-201ENST00000312912 MDN1Q9NU22 5596 aa3.71□□□□□ -1.82
KDM3A-201ENST00000312912 KRTAP9-9Q9BYP9 154 aa3.7□□□□□ -1.82
KDM3A-201ENST00000312912 MUC19Q7Z5P9 8384 aa3.68□□□□□ -1.82
KDM3A-201ENST00000312912 LCE1CQ5T751 118 aa3.62□□□□□ -1.83
KDM3A-201ENST00000312912 LCE1EQ5T753 118 aa3.62□□□□□ -1.83
KDM3A-201ENST00000312912 LCE1FQ5T754 118 aa3.62□□□□□ -1.83
KDM3A-201ENST00000312912 MUC12Q9UKN1 5478 aa3.57□□□□□ -1.84
KDM3A-201ENST00000312912 KRTAP20-2Q3LI61 65 aa3.52□□□□□ -1.85
KDM3A-201ENST00000312912 KRTAP4-6Q9BYQ5 205 aa3.49□□□□□ -1.85
KDM3A-201ENST00000312912 KRTAP4-11Q9BYQ6 195 aa3.49□□□□□ -1.85
KDM3A-201ENST00000312912 KRTAP5-5Q701N2 237 aaPredicted RBP3.37□□□□□ -1.87
KDM3A-201ENST00000312912 KRTAP5-4Q6L8H1 288 aa3.37□□□□□ -1.87
KDM3A-201ENST00000312912 AHNAK2Q8IVF2 5795 aa3.12□□□□□ -1.91
KDM3A-201ENST00000312912 KRTAP5-3Q6L8H2 238 aa3.09□□□□□ -1.92
KDM3A-201ENST00000312912 KRTAP4-4Q9BYR3 166 aa2.99□□□□□ -1.93
KDM3A-201ENST00000312912 KRTAP4-12Q9BQ66 201 aa2.94□□□□□ -1.94
KDM3A-201ENST00000312912 KRTAP4-2Q9BYR5 136 aa2.94□□□□□ -1.94
KDM3A-201ENST00000312912 MUC5ACP98088 5654 aa2.92□□□□□ -1.94
KDM3A-201ENST00000312912 HMCN1Q96RW7 5635 aa2.92□□□□□ -1.94
KDM3A-201ENST00000312912 KRTAP5-8O75690 187 aa2.74□□□□□ -1.97
KDM3A-201ENST00000312912 KRTAP5-2Q701N4 177 aa2.63□□□□□ -1.99
KDM3A-201ENST00000312912 KRTAP5-10Q6L8G5 202 aa2.58□□□□□ -2
KDM3A-201ENST00000312912 AHNAKQ09666 5890 aaKnown RBP2.56□□□□□ -2
KDM3A-201ENST00000312912 PHGR1C9JFL3 82 aa2.43□□□□□ -2.02
KDM3A-201ENST00000312912 MUC5BQ9HC84 5762 aaPredicted RBP2.41□□□□□ -2.02
KDM3A-201ENST00000312912 KRTAP5-11Q6L8G4 156 aa2.35□□□□□ -2.03
KDM3A-201ENST00000312912 KRTAP5-7Q6L8G8 165 aa2.33□□□□□ -2.04
KDM3A-201ENST00000312912 KRTAP5-1Q6L8H4 278 aa2.3□□□□□ -2.04
KDM3A-201ENST00000312912 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
KDM3A-201ENST00000312912 KRTAP21-2Q3LI59 83 aa2.18□□□□□ -2.06
KDM3A-201ENST00000312912 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.07□□□□□ -2.08
KDM3A-201ENST00000312912 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 10.6 ms