RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 PRO0255Q9UI72 69 aa0.35□□□□□ -2.35
CEP290-201ENST00000309041 FXYD4P59646 89 aa0.35□□□□□ -2.35
CEP290-201ENST00000309041 LEAP2Q969E1 77 aa0.35□□□□□ -2.35
CEP290-201ENST00000309041 PRH1P02810 166 aa0.34□□□□□ -2.35
CEP290-201ENST00000309041 DEFB135Q30KP9 77 aa0.34□□□□□ -2.36
CEP290-201ENST00000309041 SPRR2GQ9BYE4 73 aa0.34□□□□□ -2.36
CEP290-201ENST00000309041 KRTAP19-6Q3LI70 58 aa0.33□□□□□ -2.36
CEP290-201ENST00000309041 GNG7O60262 68 aa0.33□□□□□ -2.36
CEP290-201ENST00000309041 DEFA5Q01523 94 aa0.33□□□□□ -2.36
CEP290-201ENST00000309041 GNG13Q9P2W3 67 aa0.33□□□□□ -2.36
CEP290-201ENST00000309041 SRRM2Q9UQ35 2752 aaKnown RBP0.32□□□□□ -2.36
CEP290-201ENST00000309041 A0A0D9SG42 100 aa0.32□□□□□ -2.36
CEP290-201ENST00000309041 HRNRQ86YZ3 2850 aaPredicted RBP0.32□□□□□ -2.36
CEP290-201ENST00000309041 KRTAP21-1Q3LI58 79 aa0.31□□□□□ -2.36
CEP290-201ENST00000309041 DEFB107AQ8IZN7 70 aa0.31□□□□□ -2.36
CEP290-201ENST00000309041 DEFB105AQ8NG35 78 aa0.31□□□□□ -2.36
CEP290-201ENST00000309041 LCE3AQ5TA76 89 aa0.31□□□□□ -2.36
CEP290-201ENST00000309041 KRTAP19-7Q3SYF9 63 aa0.3□□□□□ -2.36
CEP290-201ENST00000309041 FDCSPQ8NFU4 85 aa0.3□□□□□ -2.36
CEP290-201ENST00000309041 LCE3CQ5T5A8 94 aa0.3□□□□□ -2.36
CEP290-201ENST00000309041 MT1FP04733 61 aa0.3□□□□□ -2.36
CEP290-201ENST00000309041 KRTAP21-2Q3LI59 83 aa0.3□□□□□ -2.36
CEP290-201ENST00000309041 ARHGAP5-AS1Q96IT6 56 aa0.3□□□□□ -2.36
CEP290-201ENST00000309041 MT1MQ8N339 61 aa0.29□□□□□ -2.36
CEP290-201ENST00000309041 MT1GP13640 62 aa0.29□□□□□ -2.36
CEP290-201ENST00000309041 LCE3EQ5T5B0 92 aa0.29□□□□□ -2.36
CEP290-201ENST00000309041 K7ERJ3 54 aa0.28□□□□□ -2.36
CEP290-201ENST00000309041 SPART-AS1P0CW21 52 aa0.27□□□□□ -2.37
CEP290-201ENST00000309041 ENHOQ6UWT2 76 aa0.27□□□□□ -2.37
CEP290-201ENST00000309041 A0A087WVE0 104 aa0.27□□□□□ -2.37
CEP290-201ENST00000309041 S4R3F8 94 aa0.27□□□□□ -2.37
CEP290-201ENST00000309041 HAMPP81172 84 aa0.27□□□□□ -2.37
CEP290-201ENST00000309041 MT1BP07438 61 aa0.26□□□□□ -2.37
CEP290-201ENST00000309041 MT1XP80297 61 aa0.26□□□□□ -2.37
CEP290-201ENST00000309041 FAM103A1Q9BTL3 118 aaKnown RBP0.26□□□□□ -2.37
CEP290-201ENST00000309041 MT2AP02795 61 aa0.26□□□□□ -2.37
CEP290-201ENST00000309041 CRCT1Q9UGL9 99 aa0.25□□□□□ -2.37
CEP290-201ENST00000309041 LOC730098B7Z3J9 87 aa0.25□□□□□ -2.37
CEP290-201ENST00000309041 TTTY13Q9BZ97 58 aa0.24□□□□□ -2.37
CEP290-201ENST00000309041 DEFB133Q30KQ1 61 aa0.23□□□□□ -2.37
CEP290-201ENST00000309041 KRTAP20-1Q3LI63 56 aa0.23□□□□□ -2.37
CEP290-201ENST00000309041 KRTAP4-1Q9BYQ7 146 aa0.22□□□□□ -2.37
CEP290-201ENST00000309041 KRTAP19-3Q7Z4W3 81 aa0.21□□□□□ -2.38
CEP290-201ENST00000309041 LCE3DQ9BYE3 92 aa0.2□□□□□ -2.38
CEP290-201ENST00000309041 DEFB130BP0DP73 79 aa0.19□□□□□ -2.38
CEP290-201ENST00000309041 DEFB130AP0DP74 79 aa0.19□□□□□ -2.38
CEP290-201ENST00000309041 DEFB1P60022 68 aa0.19□□□□□ -2.38
CEP290-201ENST00000309041 PHGR1C9JFL3 82 aa0.17□□□□□ -2.38
CEP290-201ENST00000309041 H3BVH4 76 aa0.16□□□□□ -2.38
CEP290-201ENST00000309041 DEFB106AQ8N104 65 aa0.16□□□□□ -2.38
CEP290-201ENST00000309041 DEFB104AQ8WTQ1 72 aa0.16□□□□□ -2.38
CEP290-201ENST00000309041 KRTAP6-1Q3LI64 71 aa0.16□□□□□ -2.38
CEP290-201ENST00000309041 A0A096LPF7 62 aa0.14□□□□□ -2.39
CEP290-201ENST00000309041 KRTAP20-2Q3LI61 65 aa0.14□□□□□ -2.39
CEP290-201ENST00000309041 DEFA4P12838 97 aa0.13□□□□□ -2.39
CEP290-201ENST00000309041 HILPDAQ9Y5L2 63 aa0.13□□□□□ -2.39
CEP290-201ENST00000309041 SMR3BP02814 79 aaPredicted RBP0.12□□□□□ -2.39
CEP290-201ENST00000309041 TOMM7Q9P0U1 55 aa0.11□□□□□ -2.39
CEP290-201ENST00000309041 DEFB108BQ8NET1 73 aa0.1□□□□□ -2.39
CEP290-201ENST00000309041 APLNQ9ULZ1 77 aa0.09□□□□□ -2.39
CEP290-201ENST00000309041 DEFB110Q30KQ9 67 aa0.08□□□□□ -2.4
CEP290-201ENST00000309041 RPL39LQ96EH5 51 aaKnown RBP0.08□□□□□ -2.4
CEP290-201ENST00000309041 RPL39P62891 51 aaKnown RBP0.07□□□□□ -2.4
CEP290-201ENST00000309041 DEFB108AA8MXU0 73 aa0.07□□□□□ -2.4
CEP290-201ENST00000309041 WFDC10BQ8IUB3 73 aa0.06□□□□□ -2.4
CEP290-201ENST00000309041 A0A096LNI7 61 aa0.04□□□□□ -2.4
CEP290-201ENST00000309041 MT4P47944 62 aa0.02□□□□□ -2.41
CEP290-201ENST00000309041 RPL39P5Q59GN2 51 aa0.02□□□□□ -2.41
CEP290-201ENST00000309041 KRTAP6-2Q3LI66 62 aa0.01□□□□□ -2.41
CEP290-201ENST00000309041 PRM1P04553 51 aa-0.01□□□□□ -2.41
CEP290-201ENST00000309041 HTN1P15515 57 aa-0.06□□□□□ -2.42
CEP290-201ENST00000309041 DEFB4AO15263 64 aa-0.12□□□□□ -2.43
CEP290-201ENST00000309041 STATHP02808 62 aa-0.14□□□□□ -2.43
CEP290-201ENST00000309041 TTTY10Q9BZA0 68 aa-0.22□□□□□ -2.45
CEP290-201ENST00000309041 H3BSH0 61 aa-0.28□□□□□ -2.45
CEP290-201ENST00000309041 HTN3P15516 51 aa-0.28□□□□□ -2.45
CEP290-201ENST00000309041 APELAP0DMC3 54 aa-0.34□□□□□ -2.46
Retrieved 77 of 20,778 RNA–protein pairs in 126.6 ms