RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 INE1O15225 51 aa3.54□□□□□ -1.84
TM4SF1-201ENST00000305366 KRTAP6-3Q3LI67 103 aa3.51□□□□□ -1.85
TM4SF1-201ENST00000305366 KRTAP5-11Q6L8G4 156 aa3.49□□□□□ -1.85
TM4SF1-201ENST00000305366 NEBP20929 6669 aa3.47□□□□□ -1.85
TM4SF1-201ENST00000305366 KRTAP5-1Q6L8H4 278 aa3.46□□□□□ -1.86
TM4SF1-201ENST00000305366 PLAC4Q8WY50 150 aa3.45□□□□□ -1.86
TM4SF1-201ENST00000305366 KRTAP4-4Q9BYR3 166 aa3.43□□□□□ -1.86
TM4SF1-201ENST00000305366 PP632Q6XCG6 107 aa3.4□□□□□ -1.87
TM4SF1-201ENST00000305366 MUC12Q9UKN1 5478 aa3.39□□□□□ -1.87
TM4SF1-201ENST00000305366 MT1BP07438 61 aa3.38□□□□□ -1.87
TM4SF1-201ENST00000305366 KRTAP10-7P60409 375 aaPredicted RBP3.37□□□□□ -1.87
TM4SF1-201ENST00000305366 KRTAP20-1Q3LI63 56 aa3.34□□□□□ -1.87
TM4SF1-201ENST00000305366 KRTAP19-8Q3LI54 63 aa3.33□□□□□ -1.88
TM4SF1-201ENST00000305366 SPRR2GQ9BYE4 73 aa3.33□□□□□ -1.88
TM4SF1-201ENST00000305366 KRTAP10-5P60370 271 aa3.33□□□□□ -1.88
TM4SF1-201ENST00000305366 MDN1Q9NU22 5596 aa3.3□□□□□ -1.88
TM4SF1-201ENST00000305366 KMT2DO14686 5537 aa3.3□□□□□ -1.88
TM4SF1-201ENST00000305366 TNP1P09430 55 aa3.3□□□□□ -1.88
TM4SF1-201ENST00000305366 SPRR2FQ96RM1 72 aa3.21□□□□□ -1.9
TM4SF1-201ENST00000305366 KRTAP2-3P0C7H8 128 aa3.2□□□□□ -1.9
TM4SF1-201ENST00000305366 KRTAP2-4Q9BYR9 128 aa3.2□□□□□ -1.9
TM4SF1-201ENST00000305366 SPRR2EP22531 72 aa3.2□□□□□ -1.9
TM4SF1-201ENST00000305366 SPRR2BP35325 72 aa3.2□□□□□ -1.9
TM4SF1-201ENST00000305366 SPRR2AP35326 72 aa3.2□□□□□ -1.9
TM4SF1-201ENST00000305366 SPRR5A0A1B0GTR4 108 aa3.15□□□□□ -1.9
TM4SF1-201ENST00000305366 KRTAP8-1Q8IUC2 63 aa3.15□□□□□ -1.9
TM4SF1-201ENST00000305366 KRTAP5-2Q701N4 177 aa3.15□□□□□ -1.91
TM4SF1-201ENST00000305366 MT1XP80297 61 aa3.14□□□□□ -1.91
TM4SF1-201ENST00000305366 LCE1AQ5T7P2 110 aa3.1□□□□□ -1.91
TM4SF1-201ENST00000305366 LCE3AQ5TA76 89 aa3.1□□□□□ -1.91
TM4SF1-201ENST00000305366 KRTAP2-2Q9BYT5 123 aa3.1□□□□□ -1.91
TM4SF1-201ENST00000305366 KRTAP2-1Q9BYU5 128 aa3.1□□□□□ -1.91
TM4SF1-201ENST00000305366 SPRR2DP22532 72 aa3.09□□□□□ -1.91
TM4SF1-201ENST00000305366 HMCN1Q96RW7 5635 aa3.04□□□□□ -1.92
TM4SF1-201ENST00000305366 KRTAP10-12P60413 245 aa3.01□□□□□ -1.93
TM4SF1-201ENST00000305366 LCE1EQ5T753 118 aa3□□□□□ -1.93
TM4SF1-201ENST00000305366 KRTAP12-3P60328 96 aa2.97□□□□□ -1.93
TM4SF1-201ENST00000305366 DSTQ03001 7570 aaKnown RBP2.93□□□□□ -1.94
TM4SF1-201ENST00000305366 GPR98Q8WXG9 6306 aa2.91□□□□□ -1.94
TM4SF1-201ENST00000305366 MT3P25713 68 aa2.87□□□□□ -1.95
TM4SF1-201ENST00000305366 KRTAP4-3Q9BYR4 195 aa2.87□□□□□ -1.95
TM4SF1-201ENST00000305366 KRTAP5-8O75690 187 aa2.85□□□□□ -1.95
TM4SF1-201ENST00000305366 OBSCNQ5VST9 7968 aa2.85□□□□□ -1.95
TM4SF1-201ENST00000305366 KRTAP19-5Q3LI72 72 aa2.84□□□□□ -1.96
TM4SF1-201ENST00000305366 KRTAP19-7Q3SYF9 63 aa2.8□□□□□ -1.96
TM4SF1-201ENST00000305366 LCE3CQ5T5A8 94 aa2.8□□□□□ -1.96
TM4SF1-201ENST00000305366 MT1EP04732 61 aa2.79□□□□□ -1.96
TM4SF1-201ENST00000305366 KRTAP19-3Q7Z4W3 81 aa2.79□□□□□ -1.96
TM4SF1-201ENST00000305366 MT4P47944 62 aa2.74□□□□□ -1.97
TM4SF1-201ENST00000305366 LCE1FQ5T754 118 aa2.74□□□□□ -1.97
TM4SF1-201ENST00000305366 MT1GP13640 62 aa2.71□□□□□ -1.98
TM4SF1-201ENST00000305366 MT1MQ8N339 61 aa2.67□□□□□ -1.98
TM4SF1-201ENST00000305366 MT1LQ93083 61 aa2.67□□□□□ -1.98
TM4SF1-201ENST00000305366 KRTAP9-6A8MVA2 160 aa2.66□□□□□ -1.98
TM4SF1-201ENST00000305366 AHNAK2Q8IVF2 5795 aa2.65□□□□□ -1.98
TM4SF1-201ENST00000305366 KRTAP5-10Q6L8G5 202 aa2.58□□□□□ -2
TM4SF1-201ENST00000305366 KRTAP5-7Q6L8G8 165 aa2.49□□□□□ -2.01
TM4SF1-201ENST00000305366 KRTAP12-4P60329 112 aa2.48□□□□□ -2.01
TM4SF1-201ENST00000305366 KRTAP20-2Q3LI61 65 aa2.48□□□□□ -2.01
TM4SF1-201ENST00000305366 SYNE1Q8NF91 8797 aaKnown RBP2.43□□□□□ -2.02
TM4SF1-201ENST00000305366 KRTAP5-5Q701N2 237 aaPredicted RBP2.42□□□□□ -2.02
TM4SF1-201ENST00000305366 LCE3EQ5T5B0 92 aa2.29□□□□□ -2.04
TM4SF1-201ENST00000305366 MT1AP04731 61 aa2.27□□□□□ -2.05
TM4SF1-201ENST00000305366 KRTAP6-1Q3LI64 71 aa2.26□□□□□ -2.05
TM4SF1-201ENST00000305366 AHNAKQ09666 5890 aaKnown RBP2.25□□□□□ -2.05
TM4SF1-201ENST00000305366 MUC5BQ9HC84 5762 aaPredicted RBP2.22□□□□□ -2.05
TM4SF1-201ENST00000305366 MUC5ACP98088 5654 aa2.21□□□□□ -2.06
TM4SF1-201ENST00000305366 KRTAP6-2Q3LI66 62 aa2.2□□□□□ -2.06
TM4SF1-201ENST00000305366 LCE3DQ9BYE3 92 aa2.15□□□□□ -2.06
TM4SF1-201ENST00000305366 PRM1P04553 51 aa1.99□□□□□ -2.09
TM4SF1-201ENST00000305366 LCE1BQ5T7P3 118 aa1.9□□□□□ -2.11
TM4SF1-201ENST00000305366 LCE1CQ5T751 118 aa1.86□□□□□ -2.11
TM4SF1-201ENST00000305366 MUC19Q7Z5P9 8384 aa1.59□□□□□ -2.15
TM4SF1-201ENST00000305366 PHGR1C9JFL3 82 aa1.54□□□□□ -2.16
TM4SF1-201ENST00000305366 KRTAP21-2Q3LI59 83 aa1.47□□□□□ -2.17
TM4SF1-201ENST00000305366 KRTAP21-1Q3LI58 79 aa1.39□□□□□ -2.19
TM4SF1-201ENST00000305366 MUC16Q8WXI7 14507 aa0.97□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 89.4 ms