RNA–Protein interactions for RNA: ENST00000302177.2

FOXA3-201, Transcript of forkhead box A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA3, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-201ENST00000302177 KRTAP9-7A8MTY7 169 aa8.59□□□□□ -1.03
FOXA3-201ENST00000302177 KMT2DO14686 5537 aa8.44□□□□□ -1.06
FOXA3-201ENST00000302177 KRTAP9-6A8MVA2 160 aa8.42□□□□□ -1.06
FOXA3-201ENST00000302177 MT1EP04732 61 aa8.37□□□□□ -1.07
FOXA3-201ENST00000302177 MT1LQ93083 61 aa8.36□□□□□ -1.07
FOXA3-201ENST00000302177 KRTAP6-3Q3LI67 103 aa8.29□□□□□ -1.08
FOXA3-201ENST00000302177 KRTAP4-7Q9BYR0 210 aa8.26□□□□□ -1.09
FOXA3-201ENST00000302177 KRTAP2-3P0C7H8 128 aa8.25□□□□□ -1.09
FOXA3-201ENST00000302177 KRTAP2-4Q9BYR9 128 aa8.25□□□□□ -1.09
FOXA3-201ENST00000302177 KRTAP2-1Q9BYU5 128 aa8.25□□□□□ -1.09
FOXA3-201ENST00000302177 MUC12Q9UKN1 5478 aa8.11□□□□□ -1.11
FOXA3-201ENST00000302177 KRTAP5-9P26371 169 aa8.06□□□□□ -1.12
FOXA3-201ENST00000302177 SPRR2FQ96RM1 72 aa7.96□□□□□ -1.14
FOXA3-201ENST00000302177 MDN1Q9NU22 5596 aa7.94□□□□□ -1.14
FOXA3-201ENST00000302177 NEBP20929 6669 aa7.9□□□□□ -1.14
FOXA3-201ENST00000302177 MT1GP13640 62 aa7.88□□□□□ -1.15
FOXA3-201ENST00000302177 KRTAP19-3Q7Z4W3 81 aa7.85□□□□□ -1.15
FOXA3-201ENST00000302177 MT1MQ8N339 61 aa7.82□□□□□ -1.16
FOXA3-201ENST00000302177 SPRR2EP22531 72 aa7.75□□□□□ -1.17
FOXA3-201ENST00000302177 SPRR2BP35325 72 aa7.75□□□□□ -1.17
FOXA3-201ENST00000302177 SPRR2AP35326 72 aa7.75□□□□□ -1.17
FOXA3-201ENST00000302177 KRTAP4-3Q9BYR4 195 aa7.75□□□□□ -1.17
FOXA3-201ENST00000302177 LOC100996750A0A140TA64 210 aa7.71□□□□□ -1.18
FOXA3-201ENST00000302177 LCE1AQ5T7P2 110 aa7.7□□□□□ -1.18
FOXA3-201ENST00000302177 LCE5AQ5TCM9 118 aa7.6□□□□□ -1.19
FOXA3-201ENST00000302177 KRTAP20-1Q3LI63 56 aa7.53□□□□□ -1.2
FOXA3-201ENST00000302177 SPRR2DP22532 72 aa7.48□□□□□ -1.21
FOXA3-201ENST00000302177 DSTQ03001 7570 aaKnown RBP7.29□□□□□ -1.24
FOXA3-201ENST00000302177 LCE3BQ5TA77 95 aa7.24□□□□□ -1.25
FOXA3-201ENST00000302177 KRTAP2-2Q9BYT5 123 aa7.21□□□□□ -1.26
FOXA3-201ENST00000302177 KRTAP12-4P60329 112 aa7.2□□□□□ -1.26
FOXA3-201ENST00000302177 MT1AP04731 61 aa7.12□□□□□ -1.27
FOXA3-201ENST00000302177 KRTAP6-1Q3LI64 71 aa7.04□□□□□ -1.28
FOXA3-201ENST00000302177 KRTAP5-5Q701N2 237 aaPredicted RBP6.96□□□□□ -1.3
FOXA3-201ENST00000302177 KRTAP4-9Q9BYQ8 210 aa6.87□□□□□ -1.31
FOXA3-201ENST00000302177 LCE3DQ9BYE3 92 aa6.81□□□□□ -1.32
FOXA3-201ENST00000302177 LCE3EQ5T5B0 92 aa6.74□□□□□ -1.33
FOXA3-201ENST00000302177 SYNE1Q8NF91 8797 aaKnown RBP6.7□□□□□ -1.34
FOXA3-201ENST00000302177 KRTAP9-4Q9BYQ2 154 aa6.67□□□□□ -1.34
FOXA3-201ENST00000302177 MT4P47944 62 aa6.57□□□□□ -1.36
FOXA3-201ENST00000302177 LCE1DQ5T752 114 aa6.56□□□□□ -1.36
FOXA3-201ENST00000302177 LCE4AQ5TA78 99 aa6.56□□□□□ -1.36
FOXA3-201ENST00000302177 KRTAP5-4Q6L8H1 288 aa6.53□□□□□ -1.36
FOXA3-201ENST00000302177 HMCN1Q96RW7 5635 aa6.45□□□□□ -1.38
FOXA3-201ENST00000302177 KRTAP4-6Q9BYQ5 205 aa6.43□□□□□ -1.38
FOXA3-201ENST00000302177 MT3P25713 68 aa6.38□□□□□ -1.39
FOXA3-201ENST00000302177 PRM1P04553 51 aa6.33□□□□□ -1.4
FOXA3-201ENST00000302177 KRTAP6-2Q3LI66 62 aa6.31□□□□□ -1.4
FOXA3-201ENST00000302177 KRTAP20-2Q3LI61 65 aa6.18□□□□□ -1.42
FOXA3-201ENST00000302177 GPR98Q8WXG9 6306 aa6.07□□□□□ -1.44
FOXA3-201ENST00000302177 AHNAK2Q8IVF2 5795 aa6.02□□□□□ -1.45
FOXA3-201ENST00000302177 KRTAP5-3Q6L8H2 238 aa5.98□□□□□ -1.45
FOXA3-201ENST00000302177 KRTAP5-10Q6L8G5 202 aa5.88□□□□□ -1.47
FOXA3-201ENST00000302177 OBSCNQ5VST9 7968 aa5.81□□□□□ -1.48
FOXA3-201ENST00000302177 KRTAP5-2Q701N4 177 aa5.78□□□□□ -1.48
FOXA3-201ENST00000302177 KRTAP5-7Q6L8G8 165 aa5.56□□□□□ -1.52
FOXA3-201ENST00000302177 KRTAP4-11Q9BYQ6 195 aa5.56□□□□□ -1.52
FOXA3-201ENST00000302177 KRTAP5-8O75690 187 aa5.36□□□□□ -1.55
FOXA3-201ENST00000302177 LCE1EQ5T753 118 aa5.3□□□□□ -1.56
FOXA3-201ENST00000302177 KRTAP5-1Q6L8H4 278 aa5.16□□□□□ -1.58
FOXA3-201ENST00000302177 MUC5ACP98088 5654 aa5.16□□□□□ -1.58
FOXA3-201ENST00000302177 LCE1BQ5T7P3 118 aa5□□□□□ -1.61
FOXA3-201ENST00000302177 KRTAP9-9Q9BYP9 154 aa5□□□□□ -1.61
FOXA3-201ENST00000302177 LCE1CQ5T751 118 aa4.96□□□□□ -1.62
FOXA3-201ENST00000302177 MUC5BQ9HC84 5762 aaPredicted RBP4.95□□□□□ -1.62
FOXA3-201ENST00000302177 KRTAP4-2Q9BYR5 136 aa4.91□□□□□ -1.62
FOXA3-201ENST00000302177 AHNAKQ09666 5890 aaKnown RBP4.8□□□□□ -1.64
FOXA3-201ENST00000302177 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.73□□□□□ -1.65
FOXA3-201ENST00000302177 KRTAP21-2Q3LI59 83 aa4.59□□□□□ -1.67
FOXA3-201ENST00000302177 KRTAP4-12Q9BQ66 201 aa4.27□□□□□ -1.73
FOXA3-201ENST00000302177 KRTAP5-11Q6L8G4 156 aa4.26□□□□□ -1.73
FOXA3-201ENST00000302177 KRTAP21-1Q3LI58 79 aa4.07□□□□□ -1.76
FOXA3-201ENST00000302177 KRTAP4-4Q9BYR3 166 aa4.02□□□□□ -1.77
FOXA3-201ENST00000302177 LCE1FQ5T754 118 aa3.94□□□□□ -1.78
FOXA3-201ENST00000302177 PHGR1C9JFL3 82 aa3.66□□□□□ -1.82
FOXA3-201ENST00000302177 MUC19Q7Z5P9 8384 aa3.63□□□□□ -1.83
FOXA3-201ENST00000302177 MUC16Q8WXI7 14507 aa2.46□□□□□ -2.02
Retrieved 77 of 20,778 RNA–protein pairs in 7.7 ms