RNA–Protein interactions for RNA: ENST00000301764.11

DDB1-201, Transcript of damage specific DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDB1, Length 4,506 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-201ENST00000301764 KRTAP2-3P0C7H8 128 aa4.84□□□□□ -1.63
DDB1-201ENST00000301764 KRTAP19-7Q3SYF9 63 aa4.84□□□□□ -1.63
DDB1-201ENST00000301764 KRTAP2-4Q9BYR9 128 aa4.84□□□□□ -1.63
DDB1-201ENST00000301764 KRTAP2-1Q9BYU5 128 aa4.84□□□□□ -1.63
DDB1-201ENST00000301764 KRTAP4-3Q9BYR4 195 aa4.82□□□□□ -1.64
DDB1-201ENST00000301764 LCE3EQ5T5B0 92 aa4.8□□□□□ -1.64
DDB1-201ENST00000301764 KRTAP19-3Q7Z4W3 81 aa4.79□□□□□ -1.64
DDB1-201ENST00000301764 SPRR2EP22531 72 aa4.77□□□□□ -1.65
DDB1-201ENST00000301764 SPRR2BP35325 72 aa4.77□□□□□ -1.65
DDB1-201ENST00000301764 SPRR2AP35326 72 aa4.77□□□□□ -1.65
DDB1-201ENST00000301764 MT1MQ8N339 61 aa4.71□□□□□ -1.66
DDB1-201ENST00000301764 FCGBPQ9Y6R7 5405 aaPredicted RBP4.7□□□□□ -1.66
DDB1-201ENST00000301764 KRTAP9-2Q9BYQ4 174 aa4.65□□□□□ -1.67
DDB1-201ENST00000301764 PRM1P04553 51 aa4.64□□□□□ -1.67
DDB1-201ENST00000301764 KMT2DO14686 5537 aa4.64□□□□□ -1.67
DDB1-201ENST00000301764 KRTAP4-9Q9BYQ8 210 aa4.62□□□□□ -1.67
DDB1-201ENST00000301764 DSTQ03001 7570 aaKnown RBP4.61□□□□□ -1.67
DDB1-201ENST00000301764 SPRR2DP22532 72 aa4.6□□□□□ -1.67
DDB1-201ENST00000301764 USH2AO75445 5202 aa4.56□□□□□ -1.68
DDB1-201ENST00000301764 KRTAP19-6Q3LI70 58 aa4.47□□□□□ -1.69
DDB1-201ENST00000301764 LCE2AQ5TA79 106 aaPredicted RBP4.45□□□□□ -1.7
DDB1-201ENST00000301764 KRTAP9-6A0A140TA67 174 aa4.44□□□□□ -1.7
DDB1-201ENST00000301764 SYNE2Q8WXH0 6885 aaKnown RBP4.38□□□□□ -1.71
DDB1-201ENST00000301764 MT1AP04731 61 aa4.32□□□□□ -1.72
DDB1-201ENST00000301764 LCE2DQ5TA82 110 aaPredicted RBP4.31□□□□□ -1.72
DDB1-201ENST00000301764 MT3P25713 68 aa4.29□□□□□ -1.72
DDB1-201ENST00000301764 KRTAP6-1Q3LI64 71 aa4.27□□□□□ -1.73
DDB1-201ENST00000301764 KRTAP9-7A8MTY7 169 aa4.27□□□□□ -1.73
DDB1-201ENST00000301764 MUC12Q9UKN1 5478 aa4.22□□□□□ -1.73
DDB1-201ENST00000301764 KRTAP6-2Q3LI66 62 aa4.18□□□□□ -1.74
DDB1-201ENST00000301764 MT4P47944 62 aa4.17□□□□□ -1.74
DDB1-201ENST00000301764 LCE5AQ5TCM9 118 aa4.16□□□□□ -1.74
DDB1-201ENST00000301764 MACF1Q9UPN3 7388 aaKnown RBP4.16□□□□□ -1.74
DDB1-201ENST00000301764 SSPOA2VEC9 5147 aa4.04□□□□□ -1.76
DDB1-201ENST00000301764 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.01□□□□□ -1.77
DDB1-201ENST00000301764 KRTAP20-1Q3LI63 56 aa3.99□□□□□ -1.77
DDB1-201ENST00000301764 LCE1DQ5T752 114 aa3.96□□□□□ -1.77
DDB1-201ENST00000301764 LCE1BQ5T7P3 118 aa3.96□□□□□ -1.77
DDB1-201ENST00000301764 KRTAP9-4Q9BYQ2 154 aa3.96□□□□□ -1.78
DDB1-201ENST00000301764 KRTAP6-3Q3LI67 103 aa3.95□□□□□ -1.78
DDB1-201ENST00000301764 LCE1AQ5T7P2 110 aa3.89□□□□□ -1.79
DDB1-201ENST00000301764 KRTAP2-2Q9BYT5 123 aa3.84□□□□□ -1.79
DDB1-201ENST00000301764 MDN1Q9NU22 5596 aa3.78□□□□□ -1.8
DDB1-201ENST00000301764 GPR98Q8WXG9 6306 aa3.73□□□□□ -1.81
DDB1-201ENST00000301764 MUC19Q7Z5P9 8384 aa3.72□□□□□ -1.81
DDB1-201ENST00000301764 KRTAP5-5Q701N2 237 aaPredicted RBP3.71□□□□□ -1.82
DDB1-201ENST00000301764 NEBP20929 6669 aa3.58□□□□□ -1.84
DDB1-201ENST00000301764 LCE4AQ5TA78 99 aa3.57□□□□□ -1.84
DDB1-201ENST00000301764 KRTAP4-11Q9BYQ6 195 aa3.48□□□□□ -1.85
DDB1-201ENST00000301764 KRTAP5-9P26371 169 aa3.4□□□□□ -1.86
DDB1-201ENST00000301764 LCE1EQ5T753 118 aa3.37□□□□□ -1.87
DDB1-201ENST00000301764 LCE1CQ5T751 118 aa3.35□□□□□ -1.87
DDB1-201ENST00000301764 LCE1FQ5T754 118 aa3.35□□□□□ -1.87
DDB1-201ENST00000301764 KRTAP4-6Q9BYQ5 205 aa3.34□□□□□ -1.87
DDB1-201ENST00000301764 KRTAP20-2Q3LI61 65 aa3.19□□□□□ -1.9
DDB1-201ENST00000301764 KRTAP9-9Q9BYP9 154 aa3.16□□□□□ -1.9
DDB1-201ENST00000301764 MUC5ACP98088 5654 aa3.08□□□□□ -1.92
DDB1-201ENST00000301764 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
DDB1-201ENST00000301764 HMCN1Q96RW7 5635 aa2.93□□□□□ -1.94
DDB1-201ENST00000301764 KRTAP5-4Q6L8H1 288 aa2.92□□□□□ -1.94
DDB1-201ENST00000301764 AHNAK2Q8IVF2 5795 aa2.82□□□□□ -1.96
DDB1-201ENST00000301764 KRTAP4-12Q9BQ66 201 aa2.81□□□□□ -1.96
DDB1-201ENST00000301764 KRTAP4-2Q9BYR5 136 aa2.81□□□□□ -1.96
DDB1-201ENST00000301764 KRTAP5-10Q6L8G5 202 aa2.8□□□□□ -1.96
DDB1-201ENST00000301764 KRTAP5-3Q6L8H2 238 aa2.74□□□□□ -1.97
DDB1-201ENST00000301764 KRTAP5-2Q701N4 177 aa2.61□□□□□ -1.99
DDB1-201ENST00000301764 KRTAP5-8O75690 187 aa2.46□□□□□ -2.02
DDB1-201ENST00000301764 KRTAP21-2Q3LI59 83 aa2.37□□□□□ -2.03
DDB1-201ENST00000301764 KRTAP5-1Q6L8H4 278 aa2.37□□□□□ -2.03
DDB1-201ENST00000301764 AHNAKQ09666 5890 aaKnown RBP2.37□□□□□ -2.03
DDB1-201ENST00000301764 KRTAP21-1Q3LI58 79 aa2.3□□□□□ -2.04
DDB1-201ENST00000301764 MUC5BQ9HC84 5762 aaPredicted RBP2.25□□□□□ -2.05
DDB1-201ENST00000301764 KRTAP5-11Q6L8G4 156 aa2.19□□□□□ -2.06
DDB1-201ENST00000301764 PHGR1C9JFL3 82 aa2.14□□□□□ -2.07
DDB1-201ENST00000301764 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.12□□□□□ -2.07
DDB1-201ENST00000301764 KRTAP5-7Q6L8G8 165 aa2.07□□□□□ -2.08
DDB1-201ENST00000301764 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 119.1 ms