RNA–Protein interactions for RNA: ENST00000300305.7

RUNX1-201, Transcript of runt related transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUNX1, Length 6,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-201ENST00000300305 KRTAP4-9Q9BYQ8 210 aa5.02□□□□□ -1.61
RUNX1-201ENST00000300305 MT1MQ8N339 61 aa4.97□□□□□ -1.61
RUNX1-201ENST00000300305 MT3P25713 68 aa4.9□□□□□ -1.63
RUNX1-201ENST00000300305 KRTAP9-2Q9BYQ4 174 aa4.9□□□□□ -1.63
RUNX1-201ENST00000300305 MUC17Q685J3 4493 aa4.89□□□□□ -1.63
RUNX1-201ENST00000300305 EPPK1P58107 5090 aaKnown RBP4.84□□□□□ -1.63
RUNX1-201ENST00000300305 SYNE2Q8WXH0 6885 aaKnown RBP4.84□□□□□ -1.63
RUNX1-201ENST00000300305 KRTAP19-6Q3LI70 58 aa4.82□□□□□ -1.64
RUNX1-201ENST00000300305 FSIP2Q5CZC0 6907 aa4.79□□□□□ -1.64
RUNX1-201ENST00000300305 LCE5AQ5TCM9 118 aa4.76□□□□□ -1.65
RUNX1-201ENST00000300305 ABCA13Q86UQ4 5058 aa4.7□□□□□ -1.66
RUNX1-201ENST00000300305 KRTAP19-7Q3SYF9 63 aa4.67□□□□□ -1.66
RUNX1-201ENST00000300305 HMCN2Q8NDA2 5059 aa4.66□□□□□ -1.66
RUNX1-201ENST00000300305 FAT4Q6V0I7 4981 aa4.62□□□□□ -1.67
RUNX1-201ENST00000300305 KRTAP2-3P0C7H8 128 aa4.59□□□□□ -1.68
RUNX1-201ENST00000300305 KRTAP2-4Q9BYR9 128 aa4.59□□□□□ -1.68
RUNX1-201ENST00000300305 KRTAP2-1Q9BYU5 128 aa4.59□□□□□ -1.68
RUNX1-201ENST00000300305 LCE2AQ5TA79 106 aaPredicted RBP4.58□□□□□ -1.68
RUNX1-201ENST00000300305 KRTAP9-6A0A140TA67 174 aa4.55□□□□□ -1.68
RUNX1-201ENST00000300305 UBR4Q5T4S7 5183 aa4.54□□□□□ -1.68
RUNX1-201ENST00000300305 MT1AP04731 61 aa4.54□□□□□ -1.68
RUNX1-201ENST00000300305 RNF213Q63HN8 5207 aa4.49□□□□□ -1.69
RUNX1-201ENST00000300305 KRTAP6-2Q3LI66 62 aa4.48□□□□□ -1.69
RUNX1-201ENST00000300305 MUC2Q02817 5179 aa4.47□□□□□ -1.69
RUNX1-201ENST00000300305 KRTAP6-1Q3LI64 71 aa4.46□□□□□ -1.69
RUNX1-201ENST00000300305 LCE1CQ5T751 118 aa4.43□□□□□ -1.7
RUNX1-201ENST00000300305 LCE1EQ5T753 118 aa4.43□□□□□ -1.7
RUNX1-201ENST00000300305 LCE1FQ5T754 118 aa4.43□□□□□ -1.7
RUNX1-201ENST00000300305 LCE1AQ5T7P2 110 aa4.43□□□□□ -1.7
RUNX1-201ENST00000300305 SYNE1Q8NF91 8797 aaKnown RBP4.42□□□□□ -1.7
RUNX1-201ENST00000300305 KRTAP20-1Q3LI63 56 aa4.41□□□□□ -1.7
RUNX1-201ENST00000300305 KRTAP9-7A8MTY7 169 aa4.4□□□□□ -1.7
RUNX1-201ENST00000300305 KRTAP9-6A8MVA2 160 aa4.37□□□□□ -1.71
RUNX1-201ENST00000300305 KRTAP9-4Q9BYQ2 154 aa4.25□□□□□ -1.73
RUNX1-201ENST00000300305 KRTAP6-3Q3LI67 103 aa4.19□□□□□ -1.74
RUNX1-201ENST00000300305 OBSCNQ5VST9 7968 aa4.19□□□□□ -1.74
RUNX1-201ENST00000300305 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.18□□□□□ -1.74
RUNX1-201ENST00000300305 LCE4AQ5TA78 99 aa4.06□□□□□ -1.76
RUNX1-201ENST00000300305 KMT2DO14686 5537 aa4.02□□□□□ -1.77
RUNX1-201ENST00000300305 KRTAP2-2Q9BYT5 123 aa4.02□□□□□ -1.77
RUNX1-201ENST00000300305 FCGBPQ9Y6R7 5405 aaPredicted RBP3.98□□□□□ -1.77
RUNX1-201ENST00000300305 KRTAP4-11Q9BYQ6 195 aa3.92□□□□□ -1.78
RUNX1-201ENST00000300305 USH2AO75445 5202 aa3.9□□□□□ -1.79
RUNX1-201ENST00000300305 DSTQ03001 7570 aaKnown RBP3.85□□□□□ -1.79
RUNX1-201ENST00000300305 KRTAP4-4Q9BYR3 166 aa3.75□□□□□ -1.81
RUNX1-201ENST00000300305 KRTAP9-9Q9BYP9 154 aa3.74□□□□□ -1.81
RUNX1-201ENST00000300305 MACF1Q9UPN3 7388 aaKnown RBP3.72□□□□□ -1.81
RUNX1-201ENST00000300305 KRTAP4-6Q9BYQ5 205 aa3.7□□□□□ -1.82
RUNX1-201ENST00000300305 KRTAP20-2Q3LI61 65 aa3.69□□□□□ -1.82
RUNX1-201ENST00000300305 SSPOA2VEC9 5147 aa3.64□□□□□ -1.83
RUNX1-201ENST00000300305 KRTAP4-12Q9BQ66 201 aa3.64□□□□□ -1.83
RUNX1-201ENST00000300305 KRTAP4-2Q9BYR5 136 aa3.64□□□□□ -1.83
RUNX1-201ENST00000300305 MUC12Q9UKN1 5478 aa3.51□□□□□ -1.85
RUNX1-201ENST00000300305 NEBP20929 6669 aa3.51□□□□□ -1.85
RUNX1-201ENST00000300305 KRTAP5-9P26371 169 aa3.49□□□□□ -1.85
RUNX1-201ENST00000300305 MUC19Q7Z5P9 8384 aa3.31□□□□□ -1.88
RUNX1-201ENST00000300305 KRTAP5-5Q701N2 237 aaPredicted RBP3.22□□□□□ -1.89
RUNX1-201ENST00000300305 MDN1Q9NU22 5596 aa3.17□□□□□ -1.9
RUNX1-201ENST00000300305 KRTAP5-4Q6L8H1 288 aa3.15□□□□□ -1.9
RUNX1-201ENST00000300305 MUC5ACP98088 5654 aa2.84□□□□□ -1.95
RUNX1-201ENST00000300305 GPR98Q8WXG9 6306 aa2.84□□□□□ -1.95
RUNX1-201ENST00000300305 KRTAP5-3Q6L8H2 238 aa2.78□□□□□ -1.96
RUNX1-201ENST00000300305 KRTAP5-8O75690 187 aa2.64□□□□□ -1.99
RUNX1-201ENST00000300305 HMCN1Q96RW7 5635 aa2.59□□□□□ -1.99
RUNX1-201ENST00000300305 PHGR1C9JFL3 82 aa2.54□□□□□ -2
RUNX1-201ENST00000300305 KRTAP5-10Q6L8G5 202 aa2.52□□□□□ -2.01
RUNX1-201ENST00000300305 KRTAP5-2Q701N4 177 aa2.47□□□□□ -2.01
RUNX1-201ENST00000300305 AHNAK2Q8IVF2 5795 aa2.3□□□□□ -2.04
RUNX1-201ENST00000300305 KRTAP5-1Q6L8H4 278 aa2.3□□□□□ -2.04
RUNX1-201ENST00000300305 MUC5BQ9HC84 5762 aaPredicted RBP2.26□□□□□ -2.05
RUNX1-201ENST00000300305 KRTAP5-11Q6L8G4 156 aa2.15□□□□□ -2.07
RUNX1-201ENST00000300305 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
RUNX1-201ENST00000300305 AHNAKQ09666 5890 aaKnown RBP2.08□□□□□ -2.08
RUNX1-201ENST00000300305 KRTAP21-1Q3LI58 79 aa1.91□□□□□ -2.1
RUNX1-201ENST00000300305 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.79□□□□□ -2.12
RUNX1-201ENST00000300305 KRTAP5-7Q6L8G8 165 aa1.74□□□□□ -2.13
RUNX1-201ENST00000300305 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 6.2 ms