RNA–Protein interactions for RNA: ENST00000300107.7

CLPX-201, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPX, Length 4,695 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-201ENST00000300107 KRTAP19-3Q7Z4W3 81 aa4.12□□□□□ -1.75
CLPX-201ENST00000300107 MT1EP04732 61 aa4.11□□□□□ -1.75
CLPX-201ENST00000300107 FLGP20930 4061 aaPredicted RBP4.09□□□□□ -1.75
CLPX-201ENST00000300107 OBSCNQ5VST9 7968 aa4.08□□□□□ -1.76
CLPX-201ENST00000300107 KRTAP9-2Q9BYQ4 174 aa4.01□□□□□ -1.77
CLPX-201ENST00000300107 HMCN2Q8NDA2 5059 aa3.97□□□□□ -1.77
CLPX-201ENST00000300107 KRTAP19-6Q3LI70 58 aa3.96□□□□□ -1.78
CLPX-201ENST00000300107 MT1MQ8N339 61 aa3.96□□□□□ -1.78
CLPX-201ENST00000300107 LCE2AQ5TA79 106 aaPredicted RBP3.94□□□□□ -1.78
CLPX-201ENST00000300107 KRTAP4-3Q9BYR4 195 aa3.92□□□□□ -1.78
CLPX-201ENST00000300107 PRM1P04553 51 aa3.91□□□□□ -1.78
CLPX-201ENST00000300107 LOC100996750A0A140TA64 210 aa3.9□□□□□ -1.78
CLPX-201ENST00000300107 SYNE2Q8WXH0 6885 aaKnown RBP3.9□□□□□ -1.79
CLPX-201ENST00000300107 KRTAP19-7Q3SYF9 63 aa3.87□□□□□ -1.79
CLPX-201ENST00000300107 MT4P47944 62 aa3.86□□□□□ -1.79
CLPX-201ENST00000300107 KRTAP2-3P0C7H8 128 aa3.86□□□□□ -1.79
CLPX-201ENST00000300107 MT3P25713 68 aa3.86□□□□□ -1.79
CLPX-201ENST00000300107 KRTAP2-4Q9BYR9 128 aa3.86□□□□□ -1.79
CLPX-201ENST00000300107 KRTAP2-1Q9BYU5 128 aa3.86□□□□□ -1.79
CLPX-201ENST00000300107 DSTQ03001 7570 aaKnown RBP3.8□□□□□ -1.8
CLPX-201ENST00000300107 FCGBPQ9Y6R7 5405 aaPredicted RBP3.78□□□□□ -1.8
CLPX-201ENST00000300107 KRTAP9-6A0A140TA67 174 aa3.74□□□□□ -1.81
CLPX-201ENST00000300107 MACF1Q9UPN3 7388 aaKnown RBP3.72□□□□□ -1.81
CLPX-201ENST00000300107 MT1AP04731 61 aa3.71□□□□□ -1.82
CLPX-201ENST00000300107 USH2AO75445 5202 aa3.7□□□□□ -1.82
CLPX-201ENST00000300107 KRTAP9-6A8MVA2 160 aa3.69□□□□□ -1.82
CLPX-201ENST00000300107 KRTAP4-9Q9BYQ8 210 aa3.69□□□□□ -1.82
CLPX-201ENST00000300107 LCE1BQ5T7P3 118 aa3.65□□□□□ -1.82
CLPX-201ENST00000300107 LCE1DQ5T752 114 aa3.65□□□□□ -1.83
CLPX-201ENST00000300107 KMT2DO14686 5537 aa3.61□□□□□ -1.83
CLPX-201ENST00000300107 KRTAP9-7A8MTY7 169 aa3.58□□□□□ -1.84
CLPX-201ENST00000300107 KRTAP6-1Q3LI64 71 aa3.49□□□□□ -1.85
CLPX-201ENST00000300107 KRTAP20-1Q3LI63 56 aa3.47□□□□□ -1.85
CLPX-201ENST00000300107 KRTAP6-2Q3LI66 62 aa3.47□□□□□ -1.85
CLPX-201ENST00000300107 KRTAP6-3Q3LI67 103 aa3.47□□□□□ -1.85
CLPX-201ENST00000300107 LCE1AQ5T7P2 110 aa3.47□□□□□ -1.85
CLPX-201ENST00000300107 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.46□□□□□ -1.85
CLPX-201ENST00000300107 LCE5AQ5TCM9 118 aa3.44□□□□□ -1.86
CLPX-201ENST00000300107 MDN1Q9NU22 5596 aa3.38□□□□□ -1.87
CLPX-201ENST00000300107 KRTAP9-4Q9BYQ2 154 aa3.37□□□□□ -1.87
CLPX-201ENST00000300107 MUC12Q9UKN1 5478 aa3.34□□□□□ -1.88
CLPX-201ENST00000300107 KRTAP2-2Q9BYT5 123 aa3.28□□□□□ -1.88
CLPX-201ENST00000300107 MUC19Q7Z5P9 8384 aa3.28□□□□□ -1.88
CLPX-201ENST00000300107 LCE4AQ5TA78 99 aa3.24□□□□□ -1.89
CLPX-201ENST00000300107 SSPOA2VEC9 5147 aa3.21□□□□□ -1.89
CLPX-201ENST00000300107 NEBP20929 6669 aa3.19□□□□□ -1.9
CLPX-201ENST00000300107 GPR98Q8WXG9 6306 aa3.16□□□□□ -1.9
CLPX-201ENST00000300107 LCE1CQ5T751 118 aa3.05□□□□□ -1.92
CLPX-201ENST00000300107 LCE1EQ5T753 118 aa3.05□□□□□ -1.92
CLPX-201ENST00000300107 LCE1FQ5T754 118 aa3.05□□□□□ -1.92
CLPX-201ENST00000300107 KRTAP5-9P26371 169 aa3.01□□□□□ -1.93
CLPX-201ENST00000300107 KRTAP4-6Q9BYQ5 205 aa2.96□□□□□ -1.93
CLPX-201ENST00000300107 KRTAP4-11Q9BYQ6 195 aa2.88□□□□□ -1.95
CLPX-201ENST00000300107 KRTAP9-9Q9BYP9 154 aa2.84□□□□□ -1.95
CLPX-201ENST00000300107 KRTAP20-2Q3LI61 65 aa2.83□□□□□ -1.96
CLPX-201ENST00000300107 KRTAP5-5Q701N2 237 aaPredicted RBP2.78□□□□□ -1.96
CLPX-201ENST00000300107 KRTAP4-12Q9BQ66 201 aa2.72□□□□□ -1.97
CLPX-201ENST00000300107 MUC5ACP98088 5654 aa2.71□□□□□ -1.98
CLPX-201ENST00000300107 HMCN1Q96RW7 5635 aa2.67□□□□□ -1.98
CLPX-201ENST00000300107 KRTAP4-4Q9BYR3 166 aa2.62□□□□□ -1.99
CLPX-201ENST00000300107 KRTAP4-2Q9BYR5 136 aa2.62□□□□□ -1.99
CLPX-201ENST00000300107 KRTAP5-4Q6L8H1 288 aa2.55□□□□□ -2
CLPX-201ENST00000300107 AHNAK2Q8IVF2 5795 aa2.52□□□□□ -2.01
CLPX-201ENST00000300107 KRTAP5-3Q6L8H2 238 aa2.38□□□□□ -2.03
CLPX-201ENST00000300107 KRTAP5-8O75690 187 aa2.19□□□□□ -2.06
CLPX-201ENST00000300107 KRTAP5-10Q6L8G5 202 aa2.18□□□□□ -2.06
CLPX-201ENST00000300107 KRTAP5-2Q701N4 177 aa2.13□□□□□ -2.07
CLPX-201ENST00000300107 AHNAKQ09666 5890 aaKnown RBP2.12□□□□□ -2.07
CLPX-201ENST00000300107 MUC5BQ9HC84 5762 aaPredicted RBP2.01□□□□□ -2.09
CLPX-201ENST00000300107 PHGR1C9JFL3 82 aa1.89□□□□□ -2.11
CLPX-201ENST00000300107 KRTAP5-1Q6L8H4 278 aa1.86□□□□□ -2.11
CLPX-201ENST00000300107 KRTAP5-11Q6L8G4 156 aa1.84□□□□□ -2.11
CLPX-201ENST00000300107 KRTAP5-7Q6L8G8 165 aa1.84□□□□□ -2.12
CLPX-201ENST00000300107 KRTAP21-2Q3LI59 83 aa1.81□□□□□ -2.12
CLPX-201ENST00000300107 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
CLPX-201ENST00000300107 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.72□□□□□ -2.13
CLPX-201ENST00000300107 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 220.8 ms