RNA–Protein interactions for RNA: ENST00000299366.11

CDH23-202, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-202ENST00000299366 LOC100996750A0A140TA64 210 aa4.95□□□□□ -1.62
CDH23-202ENST00000299366 KRTAP9-6A8MVA2 160 aa4.94□□□□□ -1.62
CDH23-202ENST00000299366 MT1LQ93083 61 aa4.9□□□□□ -1.62
CDH23-202ENST00000299366 MUC12Q9UKN1 5478 aa4.87□□□□□ -1.63
CDH23-202ENST00000299366 MT1EP04732 61 aa4.86□□□□□ -1.63
CDH23-202ENST00000299366 SPRR2EP22531 72 aa4.82□□□□□ -1.64
CDH23-202ENST00000299366 SPRR2BP35325 72 aa4.82□□□□□ -1.64
CDH23-202ENST00000299366 SPRR2AP35326 72 aa4.82□□□□□ -1.64
CDH23-202ENST00000299366 LCE2AQ5TA79 106 aaPredicted RBP4.79□□□□□ -1.64
CDH23-202ENST00000299366 KRTAP19-7Q3SYF9 63 aa4.78□□□□□ -1.64
CDH23-202ENST00000299366 KRTAP19-3Q7Z4W3 81 aa4.75□□□□□ -1.65
CDH23-202ENST00000299366 SSPOA2VEC9 5147 aa4.69□□□□□ -1.66
CDH23-202ENST00000299366 KRTAP4-9Q9BYQ8 210 aa4.68□□□□□ -1.66
CDH23-202ENST00000299366 KRTAP2-3P0C7H8 128 aa4.67□□□□□ -1.66
CDH23-202ENST00000299366 KRTAP2-4Q9BYR9 128 aa4.67□□□□□ -1.66
CDH23-202ENST00000299366 KRTAP2-1Q9BYU5 128 aa4.67□□□□□ -1.66
CDH23-202ENST00000299366 MT1MQ8N339 61 aa4.66□□□□□ -1.66
CDH23-202ENST00000299366 LCE3DQ9BYE3 92 aa4.65□□□□□ -1.66
CDH23-202ENST00000299366 MACF1Q9UPN3 7388 aaKnown RBP4.64□□□□□ -1.67
CDH23-202ENST00000299366 KRTAP19-4Q3LI73 84 aa4.63□□□□□ -1.67
CDH23-202ENST00000299366 SPRR2DP22532 72 aa4.6□□□□□ -1.67
CDH23-202ENST00000299366 LCE3EQ5T5B0 92 aa4.54□□□□□ -1.68
CDH23-202ENST00000299366 KRTAP19-6Q3LI70 58 aa4.52□□□□□ -1.69
CDH23-202ENST00000299366 PRM1P04553 51 aa4.39□□□□□ -1.71
CDH23-202ENST00000299366 KRTAP9-2Q9BYQ4 174 aa4.38□□□□□ -1.71
CDH23-202ENST00000299366 MT4P47944 62 aa4.34□□□□□ -1.71
CDH23-202ENST00000299366 LCE2DQ5TA82 110 aaPredicted RBP4.34□□□□□ -1.72
CDH23-202ENST00000299366 MDN1Q9NU22 5596 aa4.27□□□□□ -1.73
CDH23-202ENST00000299366 MUC19Q7Z5P9 8384 aa4.27□□□□□ -1.73
CDH23-202ENST00000299366 KRTAP6-1Q3LI64 71 aa4.25□□□□□ -1.73
CDH23-202ENST00000299366 MT3P25713 68 aa4.18□□□□□ -1.74
CDH23-202ENST00000299366 KRTAP9-7A8MTY7 169 aa4.17□□□□□ -1.74
CDH23-202ENST00000299366 MT1AP04731 61 aa4.16□□□□□ -1.74
CDH23-202ENST00000299366 LCE5AQ5TCM9 118 aa4.14□□□□□ -1.75
CDH23-202ENST00000299366 LCE1DQ5T752 114 aa4.13□□□□□ -1.75
CDH23-202ENST00000299366 LCE1BQ5T7P3 118 aa4.12□□□□□ -1.75
CDH23-202ENST00000299366 KRTAP6-2Q3LI66 62 aa4.06□□□□□ -1.76
CDH23-202ENST00000299366 LCE1AQ5T7P2 110 aa4.05□□□□□ -1.76
CDH23-202ENST00000299366 KRTAP9-6A0A140TA67 174 aa3.85□□□□□ -1.79
CDH23-202ENST00000299366 KRTAP9-4Q9BYQ2 154 aa3.84□□□□□ -1.79
CDH23-202ENST00000299366 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.8□□□□□ -1.8
CDH23-202ENST00000299366 KRTAP5-5Q701N2 237 aaPredicted RBP3.77□□□□□ -1.81
CDH23-202ENST00000299366 KRTAP6-3Q3LI67 103 aa3.67□□□□□ -1.82
CDH23-202ENST00000299366 KRTAP4-6Q9BYQ5 205 aa3.61□□□□□ -1.83
CDH23-202ENST00000299366 NEBP20929 6669 aa3.59□□□□□ -1.83
CDH23-202ENST00000299366 KRTAP2-2Q9BYT5 123 aa3.58□□□□□ -1.84
CDH23-202ENST00000299366 KRTAP5-9P26371 169 aa3.54□□□□□ -1.84
CDH23-202ENST00000299366 MUC5ACP98088 5654 aa3.49□□□□□ -1.85
CDH23-202ENST00000299366 KRTAP20-1Q3LI63 56 aa3.48□□□□□ -1.85
CDH23-202ENST00000299366 KRTAP4-11Q9BYQ6 195 aa3.4□□□□□ -1.87
CDH23-202ENST00000299366 LCE4AQ5TA78 99 aa3.38□□□□□ -1.87
CDH23-202ENST00000299366 HMCN1Q96RW7 5635 aa3.35□□□□□ -1.87
CDH23-202ENST00000299366 LCE1EQ5T753 118 aa3.34□□□□□ -1.88
CDH23-202ENST00000299366 GPR98Q8WXG9 6306 aa3.3□□□□□ -1.88
CDH23-202ENST00000299366 KRTAP20-2Q3LI61 65 aa3.28□□□□□ -1.88
CDH23-202ENST00000299366 LCE1CQ5T751 118 aa3.23□□□□□ -1.89
CDH23-202ENST00000299366 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
CDH23-202ENST00000299366 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
CDH23-202ENST00000299366 KRTAP4-12Q9BQ66 201 aa3.09□□□□□ -1.91
CDH23-202ENST00000299366 KRTAP4-2Q9BYR5 136 aa3.09□□□□□ -1.91
CDH23-202ENST00000299366 KRTAP5-4Q6L8H1 288 aa2.9□□□□□ -1.95
CDH23-202ENST00000299366 AHNAK2Q8IVF2 5795 aa2.87□□□□□ -1.95
CDH23-202ENST00000299366 KRTAP9-9Q9BYP9 154 aa2.86□□□□□ -1.95
CDH23-202ENST00000299366 MUC5BQ9HC84 5762 aaPredicted RBP2.77□□□□□ -1.97
CDH23-202ENST00000299366 KRTAP5-10Q6L8G5 202 aa2.76□□□□□ -1.97
CDH23-202ENST00000299366 KRTAP5-3Q6L8H2 238 aa2.66□□□□□ -1.98
CDH23-202ENST00000299366 KRTAP5-2Q701N4 177 aa2.65□□□□□ -1.99
CDH23-202ENST00000299366 KRTAP5-8O75690 187 aa2.54□□□□□ -2
CDH23-202ENST00000299366 KRTAP5-1Q6L8H4 278 aa2.42□□□□□ -2.02
CDH23-202ENST00000299366 AHNAKQ09666 5890 aaKnown RBP2.42□□□□□ -2.02
CDH23-202ENST00000299366 KRTAP21-2Q3LI59 83 aa2.41□□□□□ -2.02
CDH23-202ENST00000299366 KRTAP21-1Q3LI58 79 aa2.25□□□□□ -2.05
CDH23-202ENST00000299366 KRTAP5-11Q6L8G4 156 aa2.11□□□□□ -2.07
CDH23-202ENST00000299366 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.09□□□□□ -2.07
CDH23-202ENST00000299366 KRTAP5-7Q6L8G8 165 aa1.94□□□□□ -2.1
CDH23-202ENST00000299366 PHGR1C9JFL3 82 aa1.91□□□□□ -2.1
CDH23-202ENST00000299366 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 73.5 ms