RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 GPR98Q8WXG9 6306 aa2.81□□□□□ -1.96
DEPDC4-201ENST00000299185 NDUFAF8A1L188 74 aa2.81□□□□□ -1.96
DEPDC4-201ENST00000299185 UQCR11O14957 56 aa2.81□□□□□ -1.96
DEPDC4-201ENST00000299185 CRIPTQ9P021 101 aa2.81□□□□□ -1.96
DEPDC4-201ENST00000299185 A0A0D9SG42 100 aa2.8□□□□□ -1.96
DEPDC4-201ENST00000299185 A8MU10 97 aa2.79□□□□□ -1.96
DEPDC4-201ENST00000299185 A6NED7 52 aa2.78□□□□□ -1.96
DEPDC4-201ENST00000299185 KRTAP2-3P0C7H8 128 aa2.77□□□□□ -1.97
DEPDC4-201ENST00000299185 KRTAP2-4Q9BYR9 128 aa2.77□□□□□ -1.97
DEPDC4-201ENST00000299185 MUC12Q9UKN1 5478 aa2.77□□□□□ -1.97
DEPDC4-201ENST00000299185 MIR22HGQ0VDD5 57 aa2.76□□□□□ -1.97
DEPDC4-201ENST00000299185 KRTAP19-6Q3LI70 58 aa2.76□□□□□ -1.97
DEPDC4-201ENST00000299185 KMT2DO14686 5537 aa2.75□□□□□ -1.97
DEPDC4-201ENST00000299185 MT1XP80297 61 aa2.74□□□□□ -1.97
DEPDC4-201ENST00000299185 CDC42SE1Q9NRR8 79 aa2.74□□□□□ -1.97
DEPDC4-201ENST00000299185 KRTAP12-1P59990 96 aa2.72□□□□□ -1.97
DEPDC4-201ENST00000299185 KRTAP12-2P59991 146 aa2.72□□□□□ -1.97
DEPDC4-201ENST00000299185 A6NN06 94 aa2.71□□□□□ -1.98
DEPDC4-201ENST00000299185 SPINT4Q6UDR6 99 aa2.71□□□□□ -1.98
DEPDC4-201ENST00000299185 BRK1Q8WUW1 75 aa2.71□□□□□ -1.98
DEPDC4-201ENST00000299185 PLAC4Q8WY50 150 aa2.71□□□□□ -1.98
DEPDC4-201ENST00000299185 K7ERS5 55 aa2.66□□□□□ -1.98
DEPDC4-201ENST00000299185 CAMK2N1Q7Z7J9 78 aa2.65□□□□□ -1.99
DEPDC4-201ENST00000299185 KRTAP2-1Q9BYU5 128 aa2.65□□□□□ -1.99
DEPDC4-201ENST00000299185 PRO0628Q9UI54 55 aa2.65□□□□□ -1.99
DEPDC4-201ENST00000299185 MDN1Q9NU22 5596 aa2.65□□□□□ -1.99
DEPDC4-201ENST00000299185 LCE3EQ5T5B0 92 aa2.64□□□□□ -1.99
DEPDC4-201ENST00000299185 PRO2289Q9P1D8 64 aa2.6□□□□□ -1.99
DEPDC4-201ENST00000299185 PMAIP1Q13794 54 aa2.59□□□□□ -1.99
DEPDC4-201ENST00000299185 KRTAP5-5Q701N2 237 aaPredicted RBP2.59□□□□□ -1.99
DEPDC4-201ENST00000299185 C10orf95Q9H7T3 257 aa2.59□□□□□ -1.99
DEPDC4-201ENST00000299185 KRTAP5-8O75690 187 aa2.56□□□□□ -2
DEPDC4-201ENST00000299185 ROMO1P60602 79 aa2.54□□□□□ -2
DEPDC4-201ENST00000299185 LCE1CQ5T751 118 aa2.53□□□□□ -2
DEPDC4-201ENST00000299185 LCE1BQ5T7P3 118 aa2.53□□□□□ -2
DEPDC4-201ENST00000299185 SPRR2EP22531 72 aa2.5□□□□□ -2.01
DEPDC4-201ENST00000299185 SPRR2BP35325 72 aa2.5□□□□□ -2.01
DEPDC4-201ENST00000299185 SPRR2AP35326 72 aa2.5□□□□□ -2.01
DEPDC4-201ENST00000299185 KRTAP8-1Q8IUC2 63 aa2.5□□□□□ -2.01
DEPDC4-201ENST00000299185 TNP1P09430 55 aa2.47□□□□□ -2.01
DEPDC4-201ENST00000299185 KRTAP25-1Q3LHN0 102 aa2.47□□□□□ -2.01
DEPDC4-201ENST00000299185 SPRR2FQ96RM1 72 aa2.47□□□□□ -2.01
DEPDC4-201ENST00000299185 KTN1-AS1Q86SY8 53 aa2.45□□□□□ -2.02
DEPDC4-201ENST00000299185 KRTAP19-5Q3LI72 72 aa2.44□□□□□ -2.02
DEPDC4-201ENST00000299185 KRTAP19-7Q3SYF9 63 aa2.44□□□□□ -2.02
DEPDC4-201ENST00000299185 SPRR2DP22532 72 aa2.43□□□□□ -2.02
DEPDC4-201ENST00000299185 DSTQ03001 7570 aaKnown RBP2.41□□□□□ -2.02
DEPDC4-201ENST00000299185 MT1EP04732 61 aa2.41□□□□□ -2.02
DEPDC4-201ENST00000299185 AHNAK2Q8IVF2 5795 aa2.4□□□□□ -2.03
DEPDC4-201ENST00000299185 PP632Q6XCG6 107 aa2.39□□□□□ -2.03
DEPDC4-201ENST00000299185 KRTAP12-3P60328 96 aa2.34□□□□□ -2.03
DEPDC4-201ENST00000299185 KRTAP5-10Q6L8G5 202 aa2.34□□□□□ -2.03
DEPDC4-201ENST00000299185 SPRR5A0A1B0GTR4 108 aa2.33□□□□□ -2.04
DEPDC4-201ENST00000299185 KRTAP5-7Q6L8G8 165 aa2.33□□□□□ -2.04
DEPDC4-201ENST00000299185 MT1LQ93083 61 aa2.33□□□□□ -2.04
DEPDC4-201ENST00000299185 KRTAP19-3Q7Z4W3 81 aa2.31□□□□□ -2.04
DEPDC4-201ENST00000299185 MT1MQ8N339 61 aa2.28□□□□□ -2.04
DEPDC4-201ENST00000299185 HMCN1Q96RW7 5635 aa2.28□□□□□ -2.05
DEPDC4-201ENST00000299185 MT1GP13640 62 aa2.23□□□□□ -2.05
DEPDC4-201ENST00000299185 MT4P47944 62 aa2.15□□□□□ -2.07
DEPDC4-201ENST00000299185 AHNAKQ09666 5890 aaKnown RBP2.15□□□□□ -2.07
DEPDC4-201ENST00000299185 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
DEPDC4-201ENST00000299185 MUC5ACP98088 5654 aa2.07□□□□□ -2.08
DEPDC4-201ENST00000299185 MUC5BQ9HC84 5762 aaPredicted RBP2.06□□□□□ -2.08
DEPDC4-201ENST00000299185 LCE3DQ9BYE3 92 aa2□□□□□ -2.09
DEPDC4-201ENST00000299185 KRTAP6-1Q3LI64 71 aa1.99□□□□□ -2.09
DEPDC4-201ENST00000299185 LUZP6Q538Z0 58 aa1.99□□□□□ -2.09
DEPDC4-201ENST00000299185 MT1AP04731 61 aa1.97□□□□□ -2.09
DEPDC4-201ENST00000299185 SYNE1Q8NF91 8797 aaKnown RBP1.95□□□□□ -2.1
DEPDC4-201ENST00000299185 KRTAP20-2Q3LI61 65 aa1.92□□□□□ -2.1
DEPDC4-201ENST00000299185 KRTAP12-4P60329 112 aa1.88□□□□□ -2.11
DEPDC4-201ENST00000299185 KRTAP6-2Q3LI66 62 aa1.85□□□□□ -2.11
DEPDC4-201ENST00000299185 KRTAP21-2Q3LI59 83 aa1.81□□□□□ -2.12
DEPDC4-201ENST00000299185 INE1O15225 51 aa1.59□□□□□ -2.15
DEPDC4-201ENST00000299185 PHGR1C9JFL3 82 aa1.4□□□□□ -2.19
DEPDC4-201ENST00000299185 PRM1P04553 51 aa1.31□□□□□ -2.2
DEPDC4-201ENST00000299185 KRTAP21-1Q3LI58 79 aa1.08□□□□□ -2.24
DEPDC4-201ENST00000299185 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 68.4 ms