RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 KRTAP4-7Q9BYR0 210 aa9.09□□□□□ -0.95
SDCCAG3-201ENST00000298537 SPRR2FQ96RM1 72 aa8.9□□□□□ -0.98
SDCCAG3-201ENST00000298537 KRTAP9-6A8MVA2 160 aa8.81□□□□□ -1
SDCCAG3-201ENST00000298537 KRTAP19-3Q7Z4W3 81 aa8.77□□□□□ -1.01
SDCCAG3-201ENST00000298537 KRTAP4-3Q9BYR4 195 aa8.76□□□□□ -1.01
SDCCAG3-201ENST00000298537 MDN1Q9NU22 5596 aa8.75□□□□□ -1.01
SDCCAG3-201ENST00000298537 INE1O15225 51 aa8.7□□□□□ -1.02
SDCCAG3-201ENST00000298537 MT1MQ8N339 61 aa8.67□□□□□ -1.02
SDCCAG3-201ENST00000298537 MT1GP13640 62 aa8.65□□□□□ -1.03
SDCCAG3-201ENST00000298537 KRTAP19-4Q3LI73 84 aa8.64□□□□□ -1.03
SDCCAG3-201ENST00000298537 DSTQ03001 7570 aaKnown RBP8.62□□□□□ -1.03
SDCCAG3-201ENST00000298537 LCE5AQ5TCM9 118 aa8.6□□□□□ -1.03
SDCCAG3-201ENST00000298537 KRTAP5-9P26371 169 aa8.58□□□□□ -1.04
SDCCAG3-201ENST00000298537 KRTAP9-6A0A140TA67 174 aa8.57□□□□□ -1.04
SDCCAG3-201ENST00000298537 LOC100996750A0A140TA64 210 aa8.51□□□□□ -1.05
SDCCAG3-201ENST00000298537 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.49□□□□□ -1.05
SDCCAG3-201ENST00000298537 LCE1AQ5T7P2 110 aa8.45□□□□□ -1.06
SDCCAG3-201ENST00000298537 SPRR2EP22531 72 aa8.33□□□□□ -1.08
SDCCAG3-201ENST00000298537 SPRR2BP35325 72 aa8.33□□□□□ -1.08
SDCCAG3-201ENST00000298537 SPRR2AP35326 72 aa8.33□□□□□ -1.08
SDCCAG3-201ENST00000298537 KRTAP6-3Q3LI67 103 aa8.26□□□□□ -1.09
SDCCAG3-201ENST00000298537 KRTAP2-3P0C7H8 128 aa8.06□□□□□ -1.12
SDCCAG3-201ENST00000298537 KRTAP2-4Q9BYR9 128 aa8.06□□□□□ -1.12
SDCCAG3-201ENST00000298537 KRTAP2-1Q9BYU5 128 aa8.06□□□□□ -1.12
SDCCAG3-201ENST00000298537 SPRR2DP22532 72 aa7.99□□□□□ -1.13
SDCCAG3-201ENST00000298537 KRTAP9-7A8MTY7 169 aa7.92□□□□□ -1.14
SDCCAG3-201ENST00000298537 NEBP20929 6669 aa7.91□□□□□ -1.14
SDCCAG3-201ENST00000298537 KRTAP5-5Q701N2 237 aaPredicted RBP7.77□□□□□ -1.17
SDCCAG3-201ENST00000298537 KRTAP6-1Q3LI64 71 aa7.73□□□□□ -1.17
SDCCAG3-201ENST00000298537 SYNE1Q8NF91 8797 aaKnown RBP7.71□□□□□ -1.18
SDCCAG3-201ENST00000298537 LCE3BQ5TA77 95 aa7.66□□□□□ -1.18
SDCCAG3-201ENST00000298537 MT1AP04731 61 aa7.63□□□□□ -1.19
SDCCAG3-201ENST00000298537 KRTAP4-9Q9BYQ8 210 aa7.36□□□□□ -1.23
SDCCAG3-201ENST00000298537 KRTAP9-4Q9BYQ2 154 aa7.26□□□□□ -1.25
SDCCAG3-201ENST00000298537 KRTAP5-4Q6L8H1 288 aa7.23□□□□□ -1.25
SDCCAG3-201ENST00000298537 MT4P47944 62 aa7.07□□□□□ -1.28
SDCCAG3-201ENST00000298537 KRTAP4-6Q9BYQ5 205 aa7.07□□□□□ -1.28
SDCCAG3-201ENST00000298537 KRTAP6-2Q3LI66 62 aa7.06□□□□□ -1.28
SDCCAG3-201ENST00000298537 KRTAP12-4P60329 112 aa7.04□□□□□ -1.28
SDCCAG3-201ENST00000298537 KRTAP2-2Q9BYT5 123 aa7.03□□□□□ -1.28
SDCCAG3-201ENST00000298537 OBSCNQ5VST9 7968 aa6.99□□□□□ -1.29
SDCCAG3-201ENST00000298537 KRTAP20-1Q3LI63 56 aa6.98□□□□□ -1.29
SDCCAG3-201ENST00000298537 LCE4AQ5TA78 99 aa6.93□□□□□ -1.3
SDCCAG3-201ENST00000298537 HMCN1Q96RW7 5635 aa6.9□□□□□ -1.3
SDCCAG3-201ENST00000298537 MT3P25713 68 aa6.87□□□□□ -1.31
SDCCAG3-201ENST00000298537 LCE3DQ9BYE3 92 aa6.85□□□□□ -1.31
SDCCAG3-201ENST00000298537 LCE1DQ5T752 114 aa6.83□□□□□ -1.32
SDCCAG3-201ENST00000298537 KRTAP20-2Q3LI61 65 aa6.82□□□□□ -1.32
SDCCAG3-201ENST00000298537 LCE3EQ5T5B0 92 aa6.67□□□□□ -1.34
SDCCAG3-201ENST00000298537 KRTAP5-2Q701N4 177 aa6.61□□□□□ -1.35
SDCCAG3-201ENST00000298537 KRTAP5-3Q6L8H2 238 aa6.55□□□□□ -1.36
SDCCAG3-201ENST00000298537 PRM1P04553 51 aa6.11□□□□□ -1.43
SDCCAG3-201ENST00000298537 AHNAK2Q8IVF2 5795 aa5.9□□□□□ -1.47
SDCCAG3-201ENST00000298537 KRTAP4-11Q9BYQ6 195 aa5.83□□□□□ -1.48
SDCCAG3-201ENST00000298537 LCE1EQ5T753 118 aa5.82□□□□□ -1.48
SDCCAG3-201ENST00000298537 MUC5ACP98088 5654 aa5.8□□□□□ -1.48
SDCCAG3-201ENST00000298537 KRTAP5-1Q6L8H4 278 aa5.75□□□□□ -1.49
SDCCAG3-201ENST00000298537 LCE1BQ5T7P3 118 aa5.73□□□□□ -1.49
SDCCAG3-201ENST00000298537 KRTAP5-8O75690 187 aa5.63□□□□□ -1.51
SDCCAG3-201ENST00000298537 KRTAP4-2Q9BYR5 136 aa5.6□□□□□ -1.51
SDCCAG3-201ENST00000298537 KRTAP5-10Q6L8G5 202 aa5.59□□□□□ -1.51
SDCCAG3-201ENST00000298537 LCE1CQ5T751 118 aa5.49□□□□□ -1.53
SDCCAG3-201ENST00000298537 KRTAP5-7Q6L8G8 165 aa5.36□□□□□ -1.55
SDCCAG3-201ENST00000298537 GPR98Q8WXG9 6306 aa5.24□□□□□ -1.57
SDCCAG3-201ENST00000298537 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.12□□□□□ -1.59
SDCCAG3-201ENST00000298537 MUC5BQ9HC84 5762 aaPredicted RBP5.09□□□□□ -1.6
SDCCAG3-201ENST00000298537 KRTAP21-2Q3LI59 83 aa5.02□□□□□ -1.61
SDCCAG3-201ENST00000298537 KRTAP9-9Q9BYP9 154 aa4.91□□□□□ -1.62
SDCCAG3-201ENST00000298537 KRTAP5-11Q6L8G4 156 aa4.8□□□□□ -1.64
SDCCAG3-201ENST00000298537 KRTAP4-12Q9BQ66 201 aa4.74□□□□□ -1.65
SDCCAG3-201ENST00000298537 KRTAP4-4Q9BYR3 166 aa4.63□□□□□ -1.67
SDCCAG3-201ENST00000298537 AHNAKQ09666 5890 aaKnown RBP4.3□□□□□ -1.72
SDCCAG3-201ENST00000298537 PHGR1C9JFL3 82 aa4.17□□□□□ -1.74
SDCCAG3-201ENST00000298537 MUC19Q7Z5P9 8384 aa4.15□□□□□ -1.74
SDCCAG3-201ENST00000298537 LCE1FQ5T754 118 aa4.13□□□□□ -1.75
SDCCAG3-201ENST00000298537 KRTAP21-1Q3LI58 79 aa3.93□□□□□ -1.78
SDCCAG3-201ENST00000298537 MUC16Q8WXI7 14507 aa2.7□□□□□ -1.98
Retrieved 77 of 20,778 RNA–protein pairs in 91.6 ms