RNA–Protein interactions for RNA: ENST00000289175.10

LRRFIP1-202, Transcript of LRR binding FLII interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRRFIP1, Length 3,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-202ENST00000289175 KRTAP4-7Q9BYR0 210 aa5.3□□□□□ -1.56
LRRFIP1-202ENST00000289175 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.21□□□□□ -1.57
LRRFIP1-202ENST00000289175 SPRR2EP22531 72 aa5.2□□□□□ -1.58
LRRFIP1-202ENST00000289175 SPRR2BP35325 72 aa5.2□□□□□ -1.58
LRRFIP1-202ENST00000289175 SPRR2AP35326 72 aa5.2□□□□□ -1.58
LRRFIP1-202ENST00000289175 KRTAP4-3Q9BYR4 195 aa5.17□□□□□ -1.58
LRRFIP1-202ENST00000289175 KRTAP9-7A8MTY7 169 aa5.14□□□□□ -1.59
LRRFIP1-202ENST00000289175 KRTAP19-7Q3SYF9 63 aa5.03□□□□□ -1.6
LRRFIP1-202ENST00000289175 MT1EP04732 61 aa4.98□□□□□ -1.61
LRRFIP1-202ENST00000289175 MT1GP13640 62 aa4.97□□□□□ -1.61
LRRFIP1-202ENST00000289175 SPRR2DP22532 72 aa4.96□□□□□ -1.62
LRRFIP1-202ENST00000289175 LOC100996750A0A140TA64 210 aa4.95□□□□□ -1.62
LRRFIP1-202ENST00000289175 KRTAP23-1A1A580 65 aa4.91□□□□□ -1.62
LRRFIP1-202ENST00000289175 MT1LQ93083 61 aa4.89□□□□□ -1.63
LRRFIP1-202ENST00000289175 INE1O15225 51 aa4.86□□□□□ -1.63
LRRFIP1-202ENST00000289175 KRTAP19-3Q7Z4W3 81 aa4.86□□□□□ -1.63
LRRFIP1-202ENST00000289175 LCE3CQ5T5A8 94 aa4.83□□□□□ -1.64
LRRFIP1-202ENST00000289175 LCE1AQ5T7P2 110 aa4.81□□□□□ -1.64
LRRFIP1-202ENST00000289175 SPRR5A0A1B0GTR4 108 aa4.78□□□□□ -1.64
LRRFIP1-202ENST00000289175 MT1MQ8N339 61 aa4.76□□□□□ -1.65
LRRFIP1-202ENST00000289175 KRTAP6-3Q3LI67 103 aa4.75□□□□□ -1.65
LRRFIP1-202ENST00000289175 NEBP20929 6669 aa4.68□□□□□ -1.66
LRRFIP1-202ENST00000289175 MT4P47944 62 aa4.68□□□□□ -1.66
LRRFIP1-202ENST00000289175 KRTAP4-9Q9BYQ8 210 aa4.67□□□□□ -1.66
LRRFIP1-202ENST00000289175 LCE3BQ5TA77 95 aa4.67□□□□□ -1.66
LRRFIP1-202ENST00000289175 KRTAP9-6A8MVA2 160 aa4.6□□□□□ -1.67
LRRFIP1-202ENST00000289175 LCE5AQ5TCM9 118 aa4.59□□□□□ -1.67
LRRFIP1-202ENST00000289175 KRTAP5-9P26371 169 aa4.56□□□□□ -1.68
LRRFIP1-202ENST00000289175 KRTAP20-1Q3LI63 56 aa4.5□□□□□ -1.69
LRRFIP1-202ENST00000289175 KRTAP2-3P0C7H8 128 aa4.34□□□□□ -1.71
LRRFIP1-202ENST00000289175 KRTAP2-4Q9BYR9 128 aa4.34□□□□□ -1.71
LRRFIP1-202ENST00000289175 KRTAP6-1Q3LI64 71 aa4.29□□□□□ -1.72
LRRFIP1-202ENST00000289175 KRTAP4-6Q9BYQ5 205 aa4.27□□□□□ -1.73
LRRFIP1-202ENST00000289175 KRTAP2-2Q9BYT5 123 aa4.27□□□□□ -1.73
LRRFIP1-202ENST00000289175 KRTAP2-1Q9BYU5 128 aa4.27□□□□□ -1.73
LRRFIP1-202ENST00000289175 KRTAP12-4P60329 112 aa4.25□□□□□ -1.73
LRRFIP1-202ENST00000289175 HMCN1Q96RW7 5635 aa4.16□□□□□ -1.74
LRRFIP1-202ENST00000289175 LCE1DQ5T752 114 aa4.16□□□□□ -1.74
LRRFIP1-202ENST00000289175 KRTAP6-2Q3LI66 62 aa4.09□□□□□ -1.75
LRRFIP1-202ENST00000289175 MT1AP04731 61 aa4.04□□□□□ -1.76
LRRFIP1-202ENST00000289175 KRTAP19-4Q3LI73 84 aa3.95□□□□□ -1.78
LRRFIP1-202ENST00000289175 GPR98Q8WXG9 6306 aa3.93□□□□□ -1.78
LRRFIP1-202ENST00000289175 KRTAP9-4Q9BYQ2 154 aa3.86□□□□□ -1.79
LRRFIP1-202ENST00000289175 LCE4AQ5TA78 99 aa3.85□□□□□ -1.79
LRRFIP1-202ENST00000289175 MUC19Q7Z5P9 8384 aa3.85□□□□□ -1.79
LRRFIP1-202ENST00000289175 MT3P25713 68 aa3.85□□□□□ -1.79
LRRFIP1-202ENST00000289175 KRTAP20-2Q3LI61 65 aa3.84□□□□□ -1.79
LRRFIP1-202ENST00000289175 LCE1BQ5T7P3 118 aa3.82□□□□□ -1.8
LRRFIP1-202ENST00000289175 KRTAP5-5Q701N2 237 aaPredicted RBP3.82□□□□□ -1.8
LRRFIP1-202ENST00000289175 LCE3DQ9BYE3 92 aa3.82□□□□□ -1.8
LRRFIP1-202ENST00000289175 MUC5ACP98088 5654 aa3.81□□□□□ -1.8
LRRFIP1-202ENST00000289175 PRM1P04553 51 aa3.65□□□□□ -1.82
LRRFIP1-202ENST00000289175 AHNAK2Q8IVF2 5795 aa3.65□□□□□ -1.83
LRRFIP1-202ENST00000289175 KRTAP5-4Q6L8H1 288 aa3.65□□□□□ -1.83
LRRFIP1-202ENST00000289175 LCE3EQ5T5B0 92 aa3.62□□□□□ -1.83
LRRFIP1-202ENST00000289175 KRTAP5-3Q6L8H2 238 aa3.5□□□□□ -1.85
LRRFIP1-202ENST00000289175 MUC5BQ9HC84 5762 aaPredicted RBP3.49□□□□□ -1.85
LRRFIP1-202ENST00000289175 KRTAP4-11Q9BYQ6 195 aa3.46□□□□□ -1.85
LRRFIP1-202ENST00000289175 KRTAP4-12Q9BQ66 201 aa3.28□□□□□ -1.88
LRRFIP1-202ENST00000289175 KRTAP4-2Q9BYR5 136 aa3.28□□□□□ -1.88
LRRFIP1-202ENST00000289175 KRTAP5-8O75690 187 aa3.27□□□□□ -1.89
LRRFIP1-202ENST00000289175 KRTAP5-2Q701N4 177 aa3.22□□□□□ -1.89
LRRFIP1-202ENST00000289175 KRTAP9-9Q9BYP9 154 aa3.17□□□□□ -1.9
LRRFIP1-202ENST00000289175 KRTAP5-10Q6L8G5 202 aa3.13□□□□□ -1.91
LRRFIP1-202ENST00000289175 KRTAP4-4Q9BYR3 166 aa3.11□□□□□ -1.91
LRRFIP1-202ENST00000289175 KRTAP5-1Q6L8H4 278 aa3.03□□□□□ -1.92
LRRFIP1-202ENST00000289175 LCE1CQ5T751 118 aa2.95□□□□□ -1.94
LRRFIP1-202ENST00000289175 LCE1EQ5T753 118 aa2.95□□□□□ -1.94
LRRFIP1-202ENST00000289175 LCE1FQ5T754 118 aa2.95□□□□□ -1.94
LRRFIP1-202ENST00000289175 AHNAKQ09666 5890 aaKnown RBP2.88□□□□□ -1.95
LRRFIP1-202ENST00000289175 KRTAP5-7Q6L8G8 165 aa2.75□□□□□ -1.97
LRRFIP1-202ENST00000289175 KRTAP21-2Q3LI59 83 aa2.54□□□□□ -2
LRRFIP1-202ENST00000289175 KRTAP5-11Q6L8G4 156 aa2.4□□□□□ -2.02
LRRFIP1-202ENST00000289175 PHGR1C9JFL3 82 aa2.27□□□□□ -2.05
LRRFIP1-202ENST00000289175 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.26□□□□□ -2.05
LRRFIP1-202ENST00000289175 KRTAP21-1Q3LI58 79 aa1.9□□□□□ -2.1
LRRFIP1-202ENST00000289175 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 117 ms