RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 SPRR2FQ96RM1 72 aa5.39□□□□□ -1.55
SMAD6-201ENST00000288840 LOC100996750A0A140TA64 210 aa5.38□□□□□ -1.55
SMAD6-201ENST00000288840 MT1EP04732 61 aa5.38□□□□□ -1.55
SMAD6-201ENST00000288840 MUC12Q9UKN1 5478 aa5.37□□□□□ -1.55
SMAD6-201ENST00000288840 SSPOA2VEC9 5147 aa5.3□□□□□ -1.56
SMAD6-201ENST00000288840 KRTAP9-2Q9BYQ4 174 aa5.22□□□□□ -1.57
SMAD6-201ENST00000288840 KRTAP19-4Q3LI73 84 aa5.2□□□□□ -1.58
SMAD6-201ENST00000288840 SYNE2Q8WXH0 6885 aaKnown RBP5.19□□□□□ -1.58
SMAD6-201ENST00000288840 KRTAP19-6Q3LI70 58 aa5.18□□□□□ -1.58
SMAD6-201ENST00000288840 LCE3BQ5TA77 95 aa5.17□□□□□ -1.58
SMAD6-201ENST00000288840 KRTAP19-3Q7Z4W3 81 aa5.12□□□□□ -1.59
SMAD6-201ENST00000288840 MT1MQ8N339 61 aa5.09□□□□□ -1.6
SMAD6-201ENST00000288840 KRTAP12-4P60329 112 aa5.08□□□□□ -1.6
SMAD6-201ENST00000288840 KRTAP2-3P0C7H8 128 aa5.05□□□□□ -1.6
SMAD6-201ENST00000288840 KRTAP2-4Q9BYR9 128 aa5.05□□□□□ -1.6
SMAD6-201ENST00000288840 KRTAP2-1Q9BYU5 128 aa5.05□□□□□ -1.6
SMAD6-201ENST00000288840 LCE2DQ5TA82 110 aaPredicted RBP5.02□□□□□ -1.61
SMAD6-201ENST00000288840 KRTAP9-6A0A140TA67 174 aa5□□□□□ -1.61
SMAD6-201ENST00000288840 MACF1Q9UPN3 7388 aaKnown RBP4.99□□□□□ -1.61
SMAD6-201ENST00000288840 KRTAP4-9Q9BYQ8 210 aa4.96□□□□□ -1.61
SMAD6-201ENST00000288840 SPRR2EP22531 72 aa4.85□□□□□ -1.63
SMAD6-201ENST00000288840 SPRR2BP35325 72 aa4.85□□□□□ -1.63
SMAD6-201ENST00000288840 SPRR2AP35326 72 aa4.85□□□□□ -1.63
SMAD6-201ENST00000288840 MUC19Q7Z5P9 8384 aa4.8□□□□□ -1.64
SMAD6-201ENST00000288840 MDN1Q9NU22 5596 aa4.74□□□□□ -1.65
SMAD6-201ENST00000288840 LCE5AQ5TCM9 118 aa4.73□□□□□ -1.65
SMAD6-201ENST00000288840 LCE3DQ9BYE3 92 aa4.71□□□□□ -1.66
SMAD6-201ENST00000288840 KRTAP6-1Q3LI64 71 aa4.68□□□□□ -1.66
SMAD6-201ENST00000288840 SPRR2DP22532 72 aa4.62□□□□□ -1.67
SMAD6-201ENST00000288840 KRTAP9-7A8MTY7 169 aa4.61□□□□□ -1.67
SMAD6-201ENST00000288840 LCE3EQ5T5B0 92 aa4.6□□□□□ -1.67
SMAD6-201ENST00000288840 LCE1AQ5T7P2 110 aa4.53□□□□□ -1.68
SMAD6-201ENST00000288840 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.51□□□□□ -1.69
SMAD6-201ENST00000288840 MT1AP04731 61 aa4.51□□□□□ -1.69
SMAD6-201ENST00000288840 LCE1EQ5T753 118 aa4.5□□□□□ -1.69
SMAD6-201ENST00000288840 PRM1P04553 51 aa4.48□□□□□ -1.69
SMAD6-201ENST00000288840 KRTAP6-2Q3LI66 62 aa4.32□□□□□ -1.72
SMAD6-201ENST00000288840 KRTAP5-9P26371 169 aa4.31□□□□□ -1.72
SMAD6-201ENST00000288840 MT4P47944 62 aa4.3□□□□□ -1.72
SMAD6-201ENST00000288840 MT3P25713 68 aa4.27□□□□□ -1.73
SMAD6-201ENST00000288840 KRTAP9-4Q9BYQ2 154 aa4.23□□□□□ -1.73
SMAD6-201ENST00000288840 KRTAP6-3Q3LI67 103 aa4.22□□□□□ -1.73
SMAD6-201ENST00000288840 LCE1DQ5T752 114 aa4.15□□□□□ -1.75
SMAD6-201ENST00000288840 KRTAP20-1Q3LI63 56 aa4.12□□□□□ -1.75
SMAD6-201ENST00000288840 KRTAP2-2Q9BYT5 123 aa4.08□□□□□ -1.76
SMAD6-201ENST00000288840 NEBP20929 6669 aa4.07□□□□□ -1.76
SMAD6-201ENST00000288840 KRTAP5-5Q701N2 237 aaPredicted RBP4.06□□□□□ -1.76
SMAD6-201ENST00000288840 LCE1FQ5T754 118 aa4.04□□□□□ -1.76
SMAD6-201ENST00000288840 KRTAP4-6Q9BYQ5 205 aa3.96□□□□□ -1.78
SMAD6-201ENST00000288840 LCE1BQ5T7P3 118 aa3.92□□□□□ -1.78
SMAD6-201ENST00000288840 LCE4AQ5TA78 99 aa3.75□□□□□ -1.81
SMAD6-201ENST00000288840 GPR98Q8WXG9 6306 aa3.67□□□□□ -1.82
SMAD6-201ENST00000288840 KRTAP20-2Q3LI61 65 aa3.66□□□□□ -1.82
SMAD6-201ENST00000288840 KRTAP5-4Q6L8H1 288 aa3.63□□□□□ -1.83
SMAD6-201ENST00000288840 HMCN1Q96RW7 5635 aa3.57□□□□□ -1.84
SMAD6-201ENST00000288840 MUC5ACP98088 5654 aa3.54□□□□□ -1.84
SMAD6-201ENST00000288840 KRTAP4-11Q9BYQ6 195 aa3.47□□□□□ -1.85
SMAD6-201ENST00000288840 KRTAP5-2Q701N4 177 aa3.33□□□□□ -1.88
SMAD6-201ENST00000288840 KRTAP5-3Q6L8H2 238 aa3.25□□□□□ -1.89
SMAD6-201ENST00000288840 KRTAP4-4Q9BYR3 166 aa3.21□□□□□ -1.9
SMAD6-201ENST00000288840 KRTAP5-10Q6L8G5 202 aa3.07□□□□□ -1.92
SMAD6-201ENST00000288840 KRTAP4-12Q9BQ66 201 aa3.05□□□□□ -1.92
SMAD6-201ENST00000288840 KRTAP4-2Q9BYR5 136 aa3.05□□□□□ -1.92
SMAD6-201ENST00000288840 AHNAK2Q8IVF2 5795 aa3.01□□□□□ -1.93
SMAD6-201ENST00000288840 MUC5BQ9HC84 5762 aaPredicted RBP2.97□□□□□ -1.93
SMAD6-201ENST00000288840 LCE1CQ5T751 118 aa2.96□□□□□ -1.94
SMAD6-201ENST00000288840 KRTAP9-9Q9BYP9 154 aa2.92□□□□□ -1.94
SMAD6-201ENST00000288840 KRTAP5-1Q6L8H4 278 aa2.88□□□□□ -1.95
SMAD6-201ENST00000288840 KRTAP5-8O75690 187 aa2.79□□□□□ -1.96
SMAD6-201ENST00000288840 KRTAP21-2Q3LI59 83 aa2.78□□□□□ -1.96
SMAD6-201ENST00000288840 KRTAP5-7Q6L8G8 165 aa2.67□□□□□ -1.98
SMAD6-201ENST00000288840 AHNAKQ09666 5890 aaKnown RBP2.66□□□□□ -1.98
SMAD6-201ENST00000288840 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.64□□□□□ -1.99
SMAD6-201ENST00000288840 KRTAP5-11Q6L8G4 156 aa2.55□□□□□ -2
SMAD6-201ENST00000288840 KRTAP21-1Q3LI58 79 aa2.46□□□□□ -2.02
SMAD6-201ENST00000288840 PHGR1C9JFL3 82 aa2.18□□□□□ -2.06
SMAD6-201ENST00000288840 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 10.5 ms