RNA–Protein interactions for RNA: ENST00000276826.5

ARHGAP39-201, Transcript of Rho GTPase activating protein 39, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ARHGAP39, Length 4,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP39-201ENST00000276826 HMCN2Q8NDA2 5059 aa5.01□□□□□ -1.61
ARHGAP39-201ENST00000276826 MT1LQ93083 61 aa5□□□□□ -1.61
ARHGAP39-201ENST00000276826 SPRR2DP22532 72 aa5□□□□□ -1.61
ARHGAP39-201ENST00000276826 KRTAP19-6Q3LI70 58 aa4.95□□□□□ -1.62
ARHGAP39-201ENST00000276826 KRTAP19-3Q7Z4W3 81 aa4.93□□□□□ -1.62
ARHGAP39-201ENST00000276826 MT1EP04732 61 aa4.93□□□□□ -1.62
ARHGAP39-201ENST00000276826 PRM1P04553 51 aa4.79□□□□□ -1.64
ARHGAP39-201ENST00000276826 MUC2Q02817 5179 aa4.79□□□□□ -1.64
ARHGAP39-201ENST00000276826 MT1MQ8N339 61 aa4.75□□□□□ -1.65
ARHGAP39-201ENST00000276826 LOC100996750A0A140TA64 210 aa4.74□□□□□ -1.65
ARHGAP39-201ENST00000276826 KRTAP9-6A0A140TA67 174 aa4.73□□□□□ -1.65
ARHGAP39-201ENST00000276826 KRTAP4-3Q9BYR4 195 aa4.68□□□□□ -1.66
ARHGAP39-201ENST00000276826 OBSCNQ5VST9 7968 aa4.67□□□□□ -1.66
ARHGAP39-201ENST00000276826 KRTAP2-3P0C7H8 128 aa4.66□□□□□ -1.66
ARHGAP39-201ENST00000276826 KRTAP2-4Q9BYR9 128 aa4.66□□□□□ -1.66
ARHGAP39-201ENST00000276826 KRTAP2-1Q9BYU5 128 aa4.66□□□□□ -1.66
ARHGAP39-201ENST00000276826 KRTAP19-7Q3SYF9 63 aa4.65□□□□□ -1.67
ARHGAP39-201ENST00000276826 MT3P25713 68 aa4.62□□□□□ -1.67
ARHGAP39-201ENST00000276826 KRTAP4-9Q9BYQ8 210 aa4.52□□□□□ -1.69
ARHGAP39-201ENST00000276826 KRTAP9-6A8MVA2 160 aa4.48□□□□□ -1.69
ARHGAP39-201ENST00000276826 KRTAP9-7A8MTY7 169 aa4.45□□□□□ -1.7
ARHGAP39-201ENST00000276826 MT1AP04731 61 aa4.44□□□□□ -1.7
ARHGAP39-201ENST00000276826 MT4P47944 62 aa4.42□□□□□ -1.7
ARHGAP39-201ENST00000276826 KRTAP6-3Q3LI67 103 aa4.4□□□□□ -1.71
ARHGAP39-201ENST00000276826 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.38□□□□□ -1.71
ARHGAP39-201ENST00000276826 FCGBPQ9Y6R7 5405 aaPredicted RBP4.38□□□□□ -1.71
ARHGAP39-201ENST00000276826 USH2AO75445 5202 aa4.36□□□□□ -1.71
ARHGAP39-201ENST00000276826 SYNE2Q8WXH0 6885 aaKnown RBP4.36□□□□□ -1.71
ARHGAP39-201ENST00000276826 LCE1BQ5T7P3 118 aa4.34□□□□□ -1.71
ARHGAP39-201ENST00000276826 LCE1AQ5T7P2 110 aa4.34□□□□□ -1.72
ARHGAP39-201ENST00000276826 LCE1DQ5T752 114 aa4.33□□□□□ -1.72
ARHGAP39-201ENST00000276826 KRTAP20-1Q3LI63 56 aa4.26□□□□□ -1.73
ARHGAP39-201ENST00000276826 LCE5AQ5TCM9 118 aa4.22□□□□□ -1.73
ARHGAP39-201ENST00000276826 DSTQ03001 7570 aaKnown RBP4.22□□□□□ -1.73
ARHGAP39-201ENST00000276826 KRTAP6-2Q3LI66 62 aa4.22□□□□□ -1.73
ARHGAP39-201ENST00000276826 KRTAP6-1Q3LI64 71 aa4.21□□□□□ -1.74
ARHGAP39-201ENST00000276826 KRTAP2-2Q9BYT5 123 aa4.06□□□□□ -1.76
ARHGAP39-201ENST00000276826 KMT2DO14686 5537 aa4.05□□□□□ -1.76
ARHGAP39-201ENST00000276826 MACF1Q9UPN3 7388 aaKnown RBP4.04□□□□□ -1.76
ARHGAP39-201ENST00000276826 SSPOA2VEC9 5147 aa4.03□□□□□ -1.76
ARHGAP39-201ENST00000276826 KRTAP9-4Q9BYQ2 154 aa4.03□□□□□ -1.76
ARHGAP39-201ENST00000276826 LCE4AQ5TA78 99 aa4□□□□□ -1.77
ARHGAP39-201ENST00000276826 MUC19Q7Z5P9 8384 aa4□□□□□ -1.77
ARHGAP39-201ENST00000276826 KRTAP5-9P26371 169 aa3.93□□□□□ -1.78
ARHGAP39-201ENST00000276826 MUC12Q9UKN1 5478 aa3.89□□□□□ -1.79
ARHGAP39-201ENST00000276826 NEBP20929 6669 aa3.78□□□□□ -1.8
ARHGAP39-201ENST00000276826 MDN1Q9NU22 5596 aa3.74□□□□□ -1.81
ARHGAP39-201ENST00000276826 LCE1FQ5T754 118 aa3.56□□□□□ -1.84
ARHGAP39-201ENST00000276826 KRTAP4-6Q9BYQ5 205 aa3.56□□□□□ -1.84
ARHGAP39-201ENST00000276826 LCE1CQ5T751 118 aa3.55□□□□□ -1.84
ARHGAP39-201ENST00000276826 LCE1EQ5T753 118 aa3.55□□□□□ -1.84
ARHGAP39-201ENST00000276826 KRTAP4-11Q9BYQ6 195 aa3.54□□□□□ -1.84
ARHGAP39-201ENST00000276826 KRTAP20-2Q3LI61 65 aa3.49□□□□□ -1.85
ARHGAP39-201ENST00000276826 KRTAP9-9Q9BYP9 154 aa3.49□□□□□ -1.85
ARHGAP39-201ENST00000276826 GPR98Q8WXG9 6306 aa3.48□□□□□ -1.85
ARHGAP39-201ENST00000276826 KRTAP5-5Q701N2 237 aaPredicted RBP3.37□□□□□ -1.87
ARHGAP39-201ENST00000276826 KRTAP5-4Q6L8H1 288 aa3.27□□□□□ -1.89
ARHGAP39-201ENST00000276826 KRTAP4-4Q9BYR3 166 aa3.11□□□□□ -1.91
ARHGAP39-201ENST00000276826 MUC5ACP98088 5654 aa3.03□□□□□ -1.92
ARHGAP39-201ENST00000276826 KRTAP5-3Q6L8H2 238 aa2.98□□□□□ -1.93
ARHGAP39-201ENST00000276826 HMCN1Q96RW7 5635 aa2.96□□□□□ -1.94
ARHGAP39-201ENST00000276826 KRTAP4-12Q9BQ66 201 aa2.94□□□□□ -1.94
ARHGAP39-201ENST00000276826 KRTAP4-2Q9BYR5 136 aa2.94□□□□□ -1.94
ARHGAP39-201ENST00000276826 AHNAK2Q8IVF2 5795 aa2.84□□□□□ -1.96
ARHGAP39-201ENST00000276826 KRTAP5-2Q701N4 177 aa2.74□□□□□ -1.97
ARHGAP39-201ENST00000276826 KRTAP5-8O75690 187 aa2.71□□□□□ -1.98
ARHGAP39-201ENST00000276826 AHNAKQ09666 5890 aaKnown RBP2.64□□□□□ -1.99
ARHGAP39-201ENST00000276826 KRTAP5-10Q6L8G5 202 aa2.63□□□□□ -1.99
ARHGAP39-201ENST00000276826 KRTAP5-1Q6L8H4 278 aa2.42□□□□□ -2.02
ARHGAP39-201ENST00000276826 KRTAP5-7Q6L8G8 165 aa2.38□□□□□ -2.03
ARHGAP39-201ENST00000276826 MUC5BQ9HC84 5762 aaPredicted RBP2.36□□□□□ -2.03
ARHGAP39-201ENST00000276826 KRTAP5-11Q6L8G4 156 aa2.33□□□□□ -2.04
ARHGAP39-201ENST00000276826 PHGR1C9JFL3 82 aa2.2□□□□□ -2.06
ARHGAP39-201ENST00000276826 KRTAP21-2Q3LI59 83 aa2.2□□□□□ -2.06
ARHGAP39-201ENST00000276826 KRTAP21-1Q3LI58 79 aa2.14□□□□□ -2.07
ARHGAP39-201ENST00000276826 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.13□□□□□ -2.07
ARHGAP39-201ENST00000276826 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 74.8 ms