RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 KRTAP2-3P0C7H8 128 aa5.58□□□□□ -1.52
MAP1LC3B-201ENST00000268607 KRTAP2-4Q9BYR9 128 aa5.58□□□□□ -1.52
MAP1LC3B-201ENST00000268607 KRTAP2-1Q9BYU5 128 aa5.58□□□□□ -1.52
MAP1LC3B-201ENST00000268607 KRTAP4-7Q9BYR0 210 aa5.56□□□□□ -1.52
MAP1LC3B-201ENST00000268607 DSTQ03001 7570 aaKnown RBP5.55□□□□□ -1.52
MAP1LC3B-201ENST00000268607 MDN1Q9NU22 5596 aa5.55□□□□□ -1.52
MAP1LC3B-201ENST00000268607 SPRR2FQ96RM1 72 aa5.47□□□□□ -1.53
MAP1LC3B-201ENST00000268607 KRTAP9-6A0A140TA67 174 aa5.46□□□□□ -1.54
MAP1LC3B-201ENST00000268607 MT1EP04732 61 aa5.46□□□□□ -1.54
MAP1LC3B-201ENST00000268607 MT1LQ93083 61 aa5.43□□□□□ -1.54
MAP1LC3B-201ENST00000268607 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.33□□□□□ -1.56
MAP1LC3B-201ENST00000268607 KRTAP4-3Q9BYR4 195 aa5.32□□□□□ -1.56
MAP1LC3B-201ENST00000268607 KRTAP19-4Q3LI73 84 aa5.26□□□□□ -1.57
MAP1LC3B-201ENST00000268607 KRTAP19-3Q7Z4W3 81 aa5.22□□□□□ -1.57
MAP1LC3B-201ENST00000268607 LOC100996750A0A140TA64 210 aa5.19□□□□□ -1.58
MAP1LC3B-201ENST00000268607 KRTAP5-9P26371 169 aa5.17□□□□□ -1.58
MAP1LC3B-201ENST00000268607 KRTAP12-4P60329 112 aa5.16□□□□□ -1.58
MAP1LC3B-201ENST00000268607 MT1MQ8N339 61 aa5.15□□□□□ -1.59
MAP1LC3B-201ENST00000268607 LCE1AQ5T7P2 110 aa5.14□□□□□ -1.59
MAP1LC3B-201ENST00000268607 MT1GP13640 62 aa5.13□□□□□ -1.59
MAP1LC3B-201ENST00000268607 SPRR2EP22531 72 aa5.13□□□□□ -1.59
MAP1LC3B-201ENST00000268607 SPRR2BP35325 72 aa5.13□□□□□ -1.59
MAP1LC3B-201ENST00000268607 SPRR2AP35326 72 aa5.13□□□□□ -1.59
MAP1LC3B-201ENST00000268607 LCE5AQ5TCM9 118 aa5.12□□□□□ -1.59
MAP1LC3B-201ENST00000268607 KRTAP6-3Q3LI67 103 aa5.06□□□□□ -1.6
MAP1LC3B-201ENST00000268607 KRTAP9-7A8MTY7 169 aa5.04□□□□□ -1.6
MAP1LC3B-201ENST00000268607 SYNE1Q8NF91 8797 aaKnown RBP4.91□□□□□ -1.62
MAP1LC3B-201ENST00000268607 SPRR2DP22532 72 aa4.91□□□□□ -1.62
MAP1LC3B-201ENST00000268607 NEBP20929 6669 aa4.86□□□□□ -1.63
MAP1LC3B-201ENST00000268607 KRTAP4-9Q9BYQ8 210 aa4.77□□□□□ -1.65
MAP1LC3B-201ENST00000268607 LCE3BQ5TA77 95 aa4.76□□□□□ -1.65
MAP1LC3B-201ENST00000268607 OBSCNQ5VST9 7968 aa4.7□□□□□ -1.66
MAP1LC3B-201ENST00000268607 PRM1P04553 51 aa4.64□□□□□ -1.67
MAP1LC3B-201ENST00000268607 KRTAP6-1Q3LI64 71 aa4.64□□□□□ -1.67
MAP1LC3B-201ENST00000268607 MT1AP04731 61 aa4.57□□□□□ -1.68
MAP1LC3B-201ENST00000268607 KRTAP5-5Q701N2 237 aaPredicted RBP4.57□□□□□ -1.68
MAP1LC3B-201ENST00000268607 LCE3DQ9BYE3 92 aa4.55□□□□□ -1.68
MAP1LC3B-201ENST00000268607 LCE3EQ5T5B0 92 aa4.51□□□□□ -1.69
MAP1LC3B-201ENST00000268607 MT4P47944 62 aa4.43□□□□□ -1.7
MAP1LC3B-201ENST00000268607 KRTAP20-1Q3LI63 56 aa4.4□□□□□ -1.71
MAP1LC3B-201ENST00000268607 KRTAP4-6Q9BYQ5 205 aa4.38□□□□□ -1.71
MAP1LC3B-201ENST00000268607 KRTAP2-2Q9BYT5 123 aa4.36□□□□□ -1.71
MAP1LC3B-201ENST00000268607 HMCN1Q96RW7 5635 aa4.34□□□□□ -1.71
MAP1LC3B-201ENST00000268607 KRTAP6-2Q3LI66 62 aa4.3□□□□□ -1.72
MAP1LC3B-201ENST00000268607 KRTAP5-4Q6L8H1 288 aa4.29□□□□□ -1.72
MAP1LC3B-201ENST00000268607 KRTAP9-4Q9BYQ2 154 aa4.29□□□□□ -1.72
MAP1LC3B-201ENST00000268607 LCE1DQ5T752 114 aa4.25□□□□□ -1.73
MAP1LC3B-201ENST00000268607 LCE4AQ5TA78 99 aa4.15□□□□□ -1.74
MAP1LC3B-201ENST00000268607 KRTAP20-2Q3LI61 65 aa4.13□□□□□ -1.75
MAP1LC3B-201ENST00000268607 MT3P25713 68 aa4.09□□□□□ -1.75
MAP1LC3B-201ENST00000268607 LCE1EQ5T753 118 aa4.08□□□□□ -1.76
MAP1LC3B-201ENST00000268607 KRTAP5-3Q6L8H2 238 aa3.93□□□□□ -1.78
MAP1LC3B-201ENST00000268607 KRTAP5-2Q701N4 177 aa3.89□□□□□ -1.79
MAP1LC3B-201ENST00000268607 AHNAK2Q8IVF2 5795 aa3.67□□□□□ -1.82
MAP1LC3B-201ENST00000268607 LCE1FQ5T754 118 aa3.66□□□□□ -1.82
MAP1LC3B-201ENST00000268607 KRTAP4-11Q9BYQ6 195 aa3.59□□□□□ -1.83
MAP1LC3B-201ENST00000268607 MUC5ACP98088 5654 aa3.54□□□□□ -1.84
MAP1LC3B-201ENST00000268607 LCE1BQ5T7P3 118 aa3.53□□□□□ -1.84
MAP1LC3B-201ENST00000268607 KRTAP5-1Q6L8H4 278 aa3.46□□□□□ -1.86
MAP1LC3B-201ENST00000268607 KRTAP5-8O75690 187 aa3.44□□□□□ -1.86
MAP1LC3B-201ENST00000268607 KRTAP5-10Q6L8G5 202 aa3.41□□□□□ -1.86
MAP1LC3B-201ENST00000268607 GPR98Q8WXG9 6306 aa3.34□□□□□ -1.88
MAP1LC3B-201ENST00000268607 KRTAP4-2Q9BYR5 136 aa3.33□□□□□ -1.88
MAP1LC3B-201ENST00000268607 MUC5BQ9HC84 5762 aaPredicted RBP3.32□□□□□ -1.88
MAP1LC3B-201ENST00000268607 LCE1CQ5T751 118 aa3.22□□□□□ -1.89
MAP1LC3B-201ENST00000268607 MUC19Q7Z5P9 8384 aa3.17□□□□□ -1.9
MAP1LC3B-201ENST00000268607 KRTAP5-7Q6L8G8 165 aa3.14□□□□□ -1.91
MAP1LC3B-201ENST00000268607 KRTAP9-9Q9BYP9 154 aa3.06□□□□□ -1.92
MAP1LC3B-201ENST00000268607 KRTAP4-12Q9BQ66 201 aa3.02□□□□□ -1.93
MAP1LC3B-201ENST00000268607 KRTAP21-2Q3LI59 83 aa2.98□□□□□ -1.93
MAP1LC3B-201ENST00000268607 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.94□□□□□ -1.94
MAP1LC3B-201ENST00000268607 KRTAP21-1Q3LI58 79 aa2.92□□□□□ -1.94
MAP1LC3B-201ENST00000268607 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
MAP1LC3B-201ENST00000268607 KRTAP5-11Q6L8G4 156 aa2.82□□□□□ -1.96
MAP1LC3B-201ENST00000268607 AHNAKQ09666 5890 aaKnown RBP2.72□□□□□ -1.97
MAP1LC3B-201ENST00000268607 PHGR1C9JFL3 82 aa2.47□□□□□ -2.01
MAP1LC3B-201ENST00000268607 MUC16Q8WXI7 14507 aa1.54□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 134.5 ms