RNA–Protein interactions for RNA: ENST00000265806.10

R3HCC1-201, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-201ENST00000265806 KRTAP19-3Q7Z4W3 81 aa8.54□□□□□ -1.04
R3HCC1-201ENST00000265806 MUC12Q9UKN1 5478 aa8.53□□□□□ -1.04
R3HCC1-201ENST00000265806 MT1GP13640 62 aa8.47□□□□□ -1.05
R3HCC1-201ENST00000265806 KRTAP6-3Q3LI67 103 aa8.47□□□□□ -1.05
R3HCC1-201ENST00000265806 KRTAP9-7A8MTY7 169 aa8.44□□□□□ -1.06
R3HCC1-201ENST00000265806 LCE5AQ5TCM9 118 aa8.4□□□□□ -1.06
R3HCC1-201ENST00000265806 KRTAP4-7Q9BYR0 210 aa8.4□□□□□ -1.06
R3HCC1-201ENST00000265806 MT1MQ8N339 61 aa8.36□□□□□ -1.07
R3HCC1-201ENST00000265806 LCE1AQ5T7P2 110 aa8.33□□□□□ -1.08
R3HCC1-201ENST00000265806 LUZP6Q538Z0 58 aa8.3□□□□□ -1.08
R3HCC1-201ENST00000265806 SPRR2EP22531 72 aa8.24□□□□□ -1.09
R3HCC1-201ENST00000265806 SPRR2BP35325 72 aa8.24□□□□□ -1.09
R3HCC1-201ENST00000265806 SPRR2AP35326 72 aa8.24□□□□□ -1.09
R3HCC1-201ENST00000265806 MDN1Q9NU22 5596 aa8.21□□□□□ -1.09
R3HCC1-201ENST00000265806 KRTAP4-3Q9BYR4 195 aa8.17□□□□□ -1.1
R3HCC1-201ENST00000265806 KRTAP9-6A8MVA2 160 aa8.13□□□□□ -1.11
R3HCC1-201ENST00000265806 NDUFAF8A1L188 74 aa8.09□□□□□ -1.11
R3HCC1-201ENST00000265806 NEBP20929 6669 aa8.02□□□□□ -1.13
R3HCC1-201ENST00000265806 SPRR2DP22532 72 aa7.94□□□□□ -1.14
R3HCC1-201ENST00000265806 LOC100996750A0A140TA64 210 aa7.89□□□□□ -1.15
R3HCC1-201ENST00000265806 DSTQ03001 7570 aaKnown RBP7.85□□□□□ -1.15
R3HCC1-201ENST00000265806 H3BS24 57 aa7.78□□□□□ -1.16
R3HCC1-201ENST00000265806 LCE3BQ5TA77 95 aa7.63□□□□□ -1.19
R3HCC1-201ENST00000265806 KRTAP5-5Q701N2 237 aaPredicted RBP7.56□□□□□ -1.2
R3HCC1-201ENST00000265806 KRTAP2-3P0C7H8 128 aa7.52□□□□□ -1.21
R3HCC1-201ENST00000265806 KRTAP2-4Q9BYR9 128 aa7.52□□□□□ -1.21
R3HCC1-201ENST00000265806 KRTAP2-1Q9BYU5 128 aa7.52□□□□□ -1.21
R3HCC1-201ENST00000265806 KRTAP20-1Q3LI63 56 aa7.45□□□□□ -1.22
R3HCC1-201ENST00000265806 MT1AP04731 61 aa7.41□□□□□ -1.22
R3HCC1-201ENST00000265806 KRTAP6-1Q3LI64 71 aa7.33□□□□□ -1.24
R3HCC1-201ENST00000265806 KRTAP2-2Q9BYT5 123 aa7.25□□□□□ -1.25
R3HCC1-201ENST00000265806 KRTAP5-4Q6L8H1 288 aa7.23□□□□□ -1.25
R3HCC1-201ENST00000265806 A0A0A0MQY5 61 aa7.1□□□□□ -1.27
R3HCC1-201ENST00000265806 SYNE1Q8NF91 8797 aaKnown RBP7.1□□□□□ -1.27
R3HCC1-201ENST00000265806 LCE4AQ5TA78 99 aa7.08□□□□□ -1.28
R3HCC1-201ENST00000265806 KRTAP9-4Q9BYQ2 154 aa7.03□□□□□ -1.28
R3HCC1-201ENST00000265806 KRTAP12-4P60329 112 aa7□□□□□ -1.29
R3HCC1-201ENST00000265806 MT4P47944 62 aa6.87□□□□□ -1.31
R3HCC1-201ENST00000265806 KRTAP4-6Q9BYQ5 205 aa6.85□□□□□ -1.31
R3HCC1-201ENST00000265806 KRTAP4-9Q9BYQ8 210 aa6.82□□□□□ -1.32
R3HCC1-201ENST00000265806 LCE1DQ5T752 114 aa6.78□□□□□ -1.32
R3HCC1-201ENST00000265806 KRTAP6-2Q3LI66 62 aa6.74□□□□□ -1.33
R3HCC1-201ENST00000265806 KRTAP20-2Q3LI61 65 aa6.73□□□□□ -1.33
R3HCC1-201ENST00000265806 MT3P25713 68 aa6.71□□□□□ -1.34
R3HCC1-201ENST00000265806 INE1O15225 51 aa6.69□□□□□ -1.34
R3HCC1-201ENST00000265806 HMCN1Q96RW7 5635 aa6.65□□□□□ -1.35
R3HCC1-201ENST00000265806 KRTAP5-2Q701N4 177 aa6.56□□□□□ -1.36
R3HCC1-201ENST00000265806 KRTAP5-3Q6L8H2 238 aa6.5□□□□□ -1.37
R3HCC1-201ENST00000265806 LCE3DQ9BYE3 92 aa6.45□□□□□ -1.38
R3HCC1-201ENST00000265806 GPR98Q8WXG9 6306 aa6.33□□□□□ -1.4
R3HCC1-201ENST00000265806 LCE3EQ5T5B0 92 aa6.28□□□□□ -1.4
R3HCC1-201ENST00000265806 OBSCNQ5VST9 7968 aa6.12□□□□□ -1.43
R3HCC1-201ENST00000265806 AHNAK2Q8IVF2 5795 aa6.08□□□□□ -1.44
R3HCC1-201ENST00000265806 LCE1EQ5T753 118 aa5.85□□□□□ -1.47
R3HCC1-201ENST00000265806 KRTAP4-11Q9BYQ6 195 aa5.84□□□□□ -1.47
R3HCC1-201ENST00000265806 KRTAP5-10Q6L8G5 202 aa5.8□□□□□ -1.48
R3HCC1-201ENST00000265806 KRTAP5-1Q6L8H4 278 aa5.67□□□□□ -1.5
R3HCC1-201ENST00000265806 KRTAP5-8O75690 187 aa5.62□□□□□ -1.51
R3HCC1-201ENST00000265806 KRTAP5-7Q6L8G8 165 aa5.47□□□□□ -1.53
R3HCC1-201ENST00000265806 PRM1P04553 51 aa5.45□□□□□ -1.54
R3HCC1-201ENST00000265806 LCE1CQ5T751 118 aa5.44□□□□□ -1.54
R3HCC1-201ENST00000265806 LCE1BQ5T7P3 118 aa5.44□□□□□ -1.54
R3HCC1-201ENST00000265806 KRTAP4-2Q9BYR5 136 aa5.44□□□□□ -1.54
R3HCC1-201ENST00000265806 MUC5ACP98088 5654 aa5.35□□□□□ -1.55
R3HCC1-201ENST00000265806 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.11□□□□□ -1.59
R3HCC1-201ENST00000265806 KRTAP9-9Q9BYP9 154 aa5.05□□□□□ -1.6
R3HCC1-201ENST00000265806 MUC5BQ9HC84 5762 aaPredicted RBP4.92□□□□□ -1.62
R3HCC1-201ENST00000265806 AHNAKQ09666 5890 aaKnown RBP4.83□□□□□ -1.64
R3HCC1-201ENST00000265806 KRTAP21-2Q3LI59 83 aa4.81□□□□□ -1.64
R3HCC1-201ENST00000265806 KRTAP5-11Q6L8G4 156 aa4.81□□□□□ -1.64
R3HCC1-201ENST00000265806 KRTAP4-12Q9BQ66 201 aa4.48□□□□□ -1.69
R3HCC1-201ENST00000265806 LCE1FQ5T754 118 aa4.34□□□□□ -1.71
R3HCC1-201ENST00000265806 KRTAP4-4Q9BYR3 166 aa4.23□□□□□ -1.73
R3HCC1-201ENST00000265806 PHGR1C9JFL3 82 aa4.12□□□□□ -1.75
R3HCC1-201ENST00000265806 MUC19Q7Z5P9 8384 aa3.63□□□□□ -1.83
R3HCC1-201ENST00000265806 KRTAP21-1Q3LI58 79 aa3.35□□□□□ -1.87
R3HCC1-201ENST00000265806 MUC16Q8WXI7 14507 aa2.63□□□□□ -1.99
Retrieved 77 of 20,778 RNA–protein pairs in 79.2 ms