RNA–Protein interactions for RNA: ENST00000265565.9

SCAP-201, Transcript of SREBF chaperone, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAP, Length 4,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-201ENST00000265565 KRTAP19-3Q7Z4W3 81 aa5.31□□□□□ -1.56
SCAP-201ENST00000265565 KRTAP9-6A8MVA2 160 aa5.26□□□□□ -1.57
SCAP-201ENST00000265565 LCE3DQ9BYE3 92 aa5.26□□□□□ -1.57
SCAP-201ENST00000265565 FCGBPQ9Y6R7 5405 aaPredicted RBP5.2□□□□□ -1.58
SCAP-201ENST00000265565 MT1MQ8N339 61 aa5.2□□□□□ -1.58
SCAP-201ENST00000265565 SPRR2EP22531 72 aa5.19□□□□□ -1.58
SCAP-201ENST00000265565 SPRR2BP35325 72 aa5.19□□□□□ -1.58
SCAP-201ENST00000265565 SPRR2AP35326 72 aa5.19□□□□□ -1.58
SCAP-201ENST00000265565 LCE3EQ5T5B0 92 aa5.18□□□□□ -1.58
SCAP-201ENST00000265565 DSTQ03001 7570 aaKnown RBP5.17□□□□□ -1.58
SCAP-201ENST00000265565 KRTAP2-3P0C7H8 128 aa5.17□□□□□ -1.58
SCAP-201ENST00000265565 KRTAP2-4Q9BYR9 128 aa5.17□□□□□ -1.58
SCAP-201ENST00000265565 KRTAP2-1Q9BYU5 128 aa5.17□□□□□ -1.58
SCAP-201ENST00000265565 USH2AO75445 5202 aa5.16□□□□□ -1.58
SCAP-201ENST00000265565 KMT2DO14686 5537 aa5.15□□□□□ -1.59
SCAP-201ENST00000265565 LCE2AQ5TA79 106 aaPredicted RBP5.12□□□□□ -1.59
SCAP-201ENST00000265565 KRTAP19-6Q3LI70 58 aa5.06□□□□□ -1.6
SCAP-201ENST00000265565 KRTAP4-9Q9BYQ8 210 aa5.02□□□□□ -1.61
SCAP-201ENST00000265565 SPRR2DP22532 72 aa4.97□□□□□ -1.61
SCAP-201ENST00000265565 PRM1P04553 51 aa4.94□□□□□ -1.62
SCAP-201ENST00000265565 SYNE2Q8WXH0 6885 aaKnown RBP4.91□□□□□ -1.62
SCAP-201ENST00000265565 MT1AP04731 61 aa4.74□□□□□ -1.65
SCAP-201ENST00000265565 MUC12Q9UKN1 5478 aa4.73□□□□□ -1.65
SCAP-201ENST00000265565 MT3P25713 68 aa4.73□□□□□ -1.65
SCAP-201ENST00000265565 LCE2DQ5TA82 110 aaPredicted RBP4.72□□□□□ -1.65
SCAP-201ENST00000265565 KRTAP6-1Q3LI64 71 aa4.7□□□□□ -1.66
SCAP-201ENST00000265565 LCE5AQ5TCM9 118 aa4.64□□□□□ -1.67
SCAP-201ENST00000265565 KRTAP9-7A8MTY7 169 aa4.56□□□□□ -1.68
SCAP-201ENST00000265565 MT4P47944 62 aa4.54□□□□□ -1.68
SCAP-201ENST00000265565 KRTAP9-2Q9BYQ4 174 aa4.53□□□□□ -1.68
SCAP-201ENST00000265565 SSPOA2VEC9 5147 aa4.51□□□□□ -1.69
SCAP-201ENST00000265565 KRTAP6-2Q3LI66 62 aa4.49□□□□□ -1.69
SCAP-201ENST00000265565 LCE1AQ5T7P2 110 aa4.42□□□□□ -1.7
SCAP-201ENST00000265565 LCE1DQ5T752 114 aa4.4□□□□□ -1.7
SCAP-201ENST00000265565 LCE1BQ5T7P3 118 aa4.38□□□□□ -1.71
SCAP-201ENST00000265565 KRTAP9-4Q9BYQ2 154 aa4.37□□□□□ -1.71
SCAP-201ENST00000265565 MACF1Q9UPN3 7388 aaKnown RBP4.33□□□□□ -1.72
SCAP-201ENST00000265565 KRTAP9-6A0A140TA67 174 aa4.25□□□□□ -1.73
SCAP-201ENST00000265565 MUC19Q7Z5P9 8384 aa4.07□□□□□ -1.76
SCAP-201ENST00000265565 KRTAP2-2Q9BYT5 123 aa4.05□□□□□ -1.76
SCAP-201ENST00000265565 KRTAP6-3Q3LI67 103 aa4.04□□□□□ -1.76
SCAP-201ENST00000265565 MDN1Q9NU22 5596 aa4□□□□□ -1.77
SCAP-201ENST00000265565 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.98□□□□□ -1.77
SCAP-201ENST00000265565 KRTAP5-5Q701N2 237 aaPredicted RBP3.95□□□□□ -1.78
SCAP-201ENST00000265565 KRTAP5-9P26371 169 aa3.91□□□□□ -1.78
SCAP-201ENST00000265565 LCE4AQ5TA78 99 aa3.84□□□□□ -1.8
SCAP-201ENST00000265565 KRTAP20-1Q3LI63 56 aa3.81□□□□□ -1.8
SCAP-201ENST00000265565 KRTAP4-6Q9BYQ5 205 aa3.8□□□□□ -1.8
SCAP-201ENST00000265565 KRTAP4-11Q9BYQ6 195 aa3.73□□□□□ -1.81
SCAP-201ENST00000265565 KRTAP20-2Q3LI61 65 aa3.61□□□□□ -1.83
SCAP-201ENST00000265565 NEBP20929 6669 aa3.6□□□□□ -1.83
SCAP-201ENST00000265565 GPR98Q8WXG9 6306 aa3.53□□□□□ -1.84
SCAP-201ENST00000265565 LCE1EQ5T753 118 aa3.5□□□□□ -1.85
SCAP-201ENST00000265565 MUC5ACP98088 5654 aa3.44□□□□□ -1.86
SCAP-201ENST00000265565 LCE1CQ5T751 118 aa3.41□□□□□ -1.86
SCAP-201ENST00000265565 LCE1FQ5T754 118 aa3.41□□□□□ -1.86
SCAP-201ENST00000265565 KRTAP4-4Q9BYR3 166 aa3.34□□□□□ -1.88
SCAP-201ENST00000265565 HMCN1Q96RW7 5635 aa3.28□□□□□ -1.88
SCAP-201ENST00000265565 KRTAP5-4Q6L8H1 288 aa3.26□□□□□ -1.89
SCAP-201ENST00000265565 KRTAP4-12Q9BQ66 201 aa3.16□□□□□ -1.9
SCAP-201ENST00000265565 KRTAP4-2Q9BYR5 136 aa3.16□□□□□ -1.9
SCAP-201ENST00000265565 KRTAP9-9Q9BYP9 154 aa3.08□□□□□ -1.92
SCAP-201ENST00000265565 KRTAP5-10Q6L8G5 202 aa3.02□□□□□ -1.93
SCAP-201ENST00000265565 KRTAP5-2Q701N4 177 aa2.93□□□□□ -1.94
SCAP-201ENST00000265565 KRTAP5-3Q6L8H2 238 aa2.87□□□□□ -1.95
SCAP-201ENST00000265565 AHNAK2Q8IVF2 5795 aa2.87□□□□□ -1.95
SCAP-201ENST00000265565 KRTAP5-8O75690 187 aa2.66□□□□□ -1.98
SCAP-201ENST00000265565 KRTAP21-2Q3LI59 83 aa2.61□□□□□ -1.99
SCAP-201ENST00000265565 KRTAP5-1Q6L8H4 278 aa2.6□□□□□ -1.99
SCAP-201ENST00000265565 MUC5BQ9HC84 5762 aaPredicted RBP2.53□□□□□ -2
SCAP-201ENST00000265565 KRTAP5-11Q6L8G4 156 aa2.45□□□□□ -2.02
SCAP-201ENST00000265565 KRTAP21-1Q3LI58 79 aa2.4□□□□□ -2.03
SCAP-201ENST00000265565 AHNAKQ09666 5890 aaKnown RBP2.38□□□□□ -2.03
SCAP-201ENST00000265565 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.34□□□□□ -2.03
SCAP-201ENST00000265565 PHGR1C9JFL3 82 aa2.09□□□□□ -2.08
SCAP-201ENST00000265565 KRTAP5-7Q6L8G8 165 aa2.09□□□□□ -2.08
SCAP-201ENST00000265565 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 105.9 ms