RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 MT1EP04732 61 aa6.66□□□□□ -1.34
CSPG5-201ENST00000264723 KRTAP4-3Q9BYR4 195 aa6.65□□□□□ -1.35
CSPG5-201ENST00000264723 LOC100996750A0A140TA64 210 aa6.62□□□□□ -1.35
CSPG5-201ENST00000264723 KRTAP19-6Q3LI70 58 aa6.55□□□□□ -1.36
CSPG5-201ENST00000264723 SPRR2EP22531 72 aa6.54□□□□□ -1.36
CSPG5-201ENST00000264723 SPRR2BP35325 72 aa6.54□□□□□ -1.36
CSPG5-201ENST00000264723 SPRR2AP35326 72 aa6.54□□□□□ -1.36
CSPG5-201ENST00000264723 LCE3BQ5TA77 95 aa6.54□□□□□ -1.36
CSPG5-201ENST00000264723 KRTAP19-4Q3LI73 84 aa6.54□□□□□ -1.36
CSPG5-201ENST00000264723 KRTAP19-3Q7Z4W3 81 aa6.51□□□□□ -1.37
CSPG5-201ENST00000264723 MUC12Q9UKN1 5478 aa6.48□□□□□ -1.37
CSPG5-201ENST00000264723 KRTAP12-4P60329 112 aa6.43□□□□□ -1.38
CSPG5-201ENST00000264723 KRTAP9-2Q9BYQ4 174 aa6.37□□□□□ -1.39
CSPG5-201ENST00000264723 MT1MQ8N339 61 aa6.35□□□□□ -1.39
CSPG5-201ENST00000264723 SSPOA2VEC9 5147 aa6.34□□□□□ -1.39
CSPG5-201ENST00000264723 SYNE2Q8WXH0 6885 aaKnown RBP6.34□□□□□ -1.39
CSPG5-201ENST00000264723 KRTAP2-3P0C7H8 128 aa6.26□□□□□ -1.41
CSPG5-201ENST00000264723 SPRR2DP22532 72 aa6.26□□□□□ -1.41
CSPG5-201ENST00000264723 KRTAP2-4Q9BYR9 128 aa6.26□□□□□ -1.41
CSPG5-201ENST00000264723 KRTAP2-1Q9BYU5 128 aa6.26□□□□□ -1.41
CSPG5-201ENST00000264723 LCE2DQ5TA82 110 aaPredicted RBP6.17□□□□□ -1.42
CSPG5-201ENST00000264723 KRTAP4-9Q9BYQ8 210 aa6.14□□□□□ -1.43
CSPG5-201ENST00000264723 MACF1Q9UPN3 7388 aaKnown RBP6.05□□□□□ -1.44
CSPG5-201ENST00000264723 LCE3DQ9BYE3 92 aa5.98□□□□□ -1.45
CSPG5-201ENST00000264723 LCE3EQ5T5B0 92 aa5.84□□□□□ -1.47
CSPG5-201ENST00000264723 LCE5AQ5TCM9 118 aa5.84□□□□□ -1.47
CSPG5-201ENST00000264723 KRTAP6-1Q3LI64 71 aa5.76□□□□□ -1.49
CSPG5-201ENST00000264723 LCE1AQ5T7P2 110 aa5.74□□□□□ -1.49
CSPG5-201ENST00000264723 MT4P47944 62 aa5.74□□□□□ -1.49
CSPG5-201ENST00000264723 KRTAP9-6A0A140TA67 174 aa5.72□□□□□ -1.49
CSPG5-201ENST00000264723 MT1AP04731 61 aa5.69□□□□□ -1.5
CSPG5-201ENST00000264723 MDN1Q9NU22 5596 aa5.68□□□□□ -1.5
CSPG5-201ENST00000264723 PRM1P04553 51 aa5.66□□□□□ -1.5
CSPG5-201ENST00000264723 MT3P25713 68 aa5.59□□□□□ -1.51
CSPG5-201ENST00000264723 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.58□□□□□ -1.52
CSPG5-201ENST00000264723 KRTAP9-7A8MTY7 169 aa5.51□□□□□ -1.53
CSPG5-201ENST00000264723 KRTAP6-3Q3LI67 103 aa5.46□□□□□ -1.54
CSPG5-201ENST00000264723 KRTAP6-2Q3LI66 62 aa5.41□□□□□ -1.54
CSPG5-201ENST00000264723 LCE1DQ5T752 114 aa5.29□□□□□ -1.56
CSPG5-201ENST00000264723 KRTAP9-4Q9BYQ2 154 aa5.29□□□□□ -1.56
CSPG5-201ENST00000264723 KRTAP5-9P26371 169 aa5.25□□□□□ -1.57
CSPG5-201ENST00000264723 LCE1BQ5T7P3 118 aa5.24□□□□□ -1.57
CSPG5-201ENST00000264723 MUC19Q7Z5P9 8384 aa5.08□□□□□ -1.6
CSPG5-201ENST00000264723 KRTAP20-1Q3LI63 56 aa5.03□□□□□ -1.6
CSPG5-201ENST00000264723 KRTAP5-5Q701N2 237 aaPredicted RBP4.99□□□□□ -1.61
CSPG5-201ENST00000264723 NEBP20929 6669 aa4.97□□□□□ -1.61
CSPG5-201ENST00000264723 KRTAP4-6Q9BYQ5 205 aa4.96□□□□□ -1.62
CSPG5-201ENST00000264723 KRTAP2-2Q9BYT5 123 aa4.95□□□□□ -1.62
CSPG5-201ENST00000264723 LCE4AQ5TA78 99 aa4.9□□□□□ -1.62
CSPG5-201ENST00000264723 KRTAP20-2Q3LI61 65 aa4.66□□□□□ -1.66
CSPG5-201ENST00000264723 MUC5ACP98088 5654 aa4.45□□□□□ -1.7
CSPG5-201ENST00000264723 KRTAP4-11Q9BYQ6 195 aa4.36□□□□□ -1.71
CSPG5-201ENST00000264723 LCE1EQ5T753 118 aa4.35□□□□□ -1.71
CSPG5-201ENST00000264723 HMCN1Q96RW7 5635 aa4.31□□□□□ -1.72
CSPG5-201ENST00000264723 KRTAP5-4Q6L8H1 288 aa4.28□□□□□ -1.72
CSPG5-201ENST00000264723 GPR98Q8WXG9 6306 aa4.24□□□□□ -1.73
CSPG5-201ENST00000264723 LCE1CQ5T751 118 aa4.07□□□□□ -1.76
CSPG5-201ENST00000264723 LCE1FQ5T754 118 aa4.07□□□□□ -1.76
CSPG5-201ENST00000264723 KRTAP4-4Q9BYR3 166 aa4.03□□□□□ -1.76
CSPG5-201ENST00000264723 KRTAP4-12Q9BQ66 201 aa3.97□□□□□ -1.77
CSPG5-201ENST00000264723 KRTAP4-2Q9BYR5 136 aa3.97□□□□□ -1.77
CSPG5-201ENST00000264723 KRTAP9-9Q9BYP9 154 aa3.95□□□□□ -1.78
CSPG5-201ENST00000264723 KRTAP5-2Q701N4 177 aa3.87□□□□□ -1.79
CSPG5-201ENST00000264723 KRTAP5-3Q6L8H2 238 aa3.87□□□□□ -1.79
CSPG5-201ENST00000264723 AHNAK2Q8IVF2 5795 aa3.79□□□□□ -1.8
CSPG5-201ENST00000264723 KRTAP5-10Q6L8G5 202 aa3.76□□□□□ -1.81
CSPG5-201ENST00000264723 KRTAP5-8O75690 187 aa3.62□□□□□ -1.83
CSPG5-201ENST00000264723 MUC5BQ9HC84 5762 aaPredicted RBP3.53□□□□□ -1.84
CSPG5-201ENST00000264723 KRTAP5-1Q6L8H4 278 aa3.47□□□□□ -1.85
CSPG5-201ENST00000264723 KRTAP21-2Q3LI59 83 aa3.37□□□□□ -1.87
CSPG5-201ENST00000264723 AHNAKQ09666 5890 aaKnown RBP3.2□□□□□ -1.9
CSPG5-201ENST00000264723 KRTAP5-11Q6L8G4 156 aa3.11□□□□□ -1.91
CSPG5-201ENST00000264723 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.02□□□□□ -1.93
CSPG5-201ENST00000264723 KRTAP21-1Q3LI58 79 aa2.93□□□□□ -1.94
CSPG5-201ENST00000264723 KRTAP5-7Q6L8G8 165 aa2.78□□□□□ -1.96
CSPG5-201ENST00000264723 PHGR1C9JFL3 82 aa2.67□□□□□ -1.98
CSPG5-201ENST00000264723 MUC16Q8WXI7 14507 aa1.83□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 11.1 ms