RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 KRTAP19-3Q7Z4W3 81 aa8.01□□□□□ -1.13
UFD1-201ENST00000263202 LCE1AQ5T7P2 110 aa7.96□□□□□ -1.14
UFD1-201ENST00000263202 MT1GP13640 62 aa7.92□□□□□ -1.14
UFD1-201ENST00000263202 SPRR2EP22531 72 aa7.92□□□□□ -1.14
UFD1-201ENST00000263202 SPRR2BP35325 72 aa7.92□□□□□ -1.14
UFD1-201ENST00000263202 SPRR2AP35326 72 aa7.92□□□□□ -1.14
UFD1-201ENST00000263202 LCE5AQ5TCM9 118 aa7.91□□□□□ -1.14
UFD1-201ENST00000263202 KRTAP19-4Q3LI73 84 aa7.9□□□□□ -1.14
UFD1-201ENST00000263202 MDN1Q9NU22 5596 aa7.88□□□□□ -1.15
UFD1-201ENST00000263202 LCE3CQ5T5A8 94 aa7.87□□□□□ -1.15
UFD1-201ENST00000263202 MT1MQ8N339 61 aa7.82□□□□□ -1.16
UFD1-201ENST00000263202 KRTAP4-7Q9BYR0 210 aa7.82□□□□□ -1.16
UFD1-201ENST00000263202 KRTAP4-3Q9BYR4 195 aa7.67□□□□□ -1.18
UFD1-201ENST00000263202 SPRR5A0A1B0GTR4 108 aa7.64□□□□□ -1.19
UFD1-201ENST00000263202 SPRR2DP22532 72 aa7.63□□□□□ -1.19
UFD1-201ENST00000263202 NEBP20929 6669 aa7.59□□□□□ -1.19
UFD1-201ENST00000263202 LOC100996750A0A140TA64 210 aa7.5□□□□□ -1.21
UFD1-201ENST00000263202 KRTAP4-6Q9BYQ5 205 aa7.5□□□□□ -1.21
UFD1-201ENST00000263202 KRTAP9-6A8MVA2 160 aa7.45□□□□□ -1.22
UFD1-201ENST00000263202 DSTQ03001 7570 aaKnown RBP7.4□□□□□ -1.22
UFD1-201ENST00000263202 LCE3BQ5TA77 95 aa7.35□□□□□ -1.23
UFD1-201ENST00000263202 KRTAP2-3P0C7H8 128 aa7.22□□□□□ -1.25
UFD1-201ENST00000263202 LUZP6Q538Z0 58 aa7.22□□□□□ -1.25
UFD1-201ENST00000263202 KRTAP2-4Q9BYR9 128 aa7.22□□□□□ -1.25
UFD1-201ENST00000263202 KRTAP20-1Q3LI63 56 aa7.2□□□□□ -1.26
UFD1-201ENST00000263202 KRTAP5-5Q701N2 237 aaPredicted RBP7.08□□□□□ -1.28
UFD1-201ENST00000263202 KRTAP2-2Q9BYT5 123 aa7.06□□□□□ -1.28
UFD1-201ENST00000263202 KRTAP2-1Q9BYU5 128 aa7.06□□□□□ -1.28
UFD1-201ENST00000263202 NDUFAF8A1L188 74 aa6.91□□□□□ -1.3
UFD1-201ENST00000263202 MT1AP04731 61 aa6.88□□□□□ -1.31
UFD1-201ENST00000263202 KRTAP5-4Q6L8H1 288 aa6.87□□□□□ -1.31
UFD1-201ENST00000263202 KRTAP6-1Q3LI64 71 aa6.83□□□□□ -1.32
UFD1-201ENST00000263202 LCE4AQ5TA78 99 aa6.77□□□□□ -1.33
UFD1-201ENST00000263202 MT4P47944 62 aa6.63□□□□□ -1.35
UFD1-201ENST00000263202 KRTAP4-9Q9BYQ8 210 aa6.62□□□□□ -1.35
UFD1-201ENST00000263202 KRTAP12-4P60329 112 aa6.61□□□□□ -1.35
UFD1-201ENST00000263202 SYNE1Q8NF91 8797 aaKnown RBP6.58□□□□□ -1.36
UFD1-201ENST00000263202 LCE1DQ5T752 114 aa6.56□□□□□ -1.36
UFD1-201ENST00000263202 KRTAP9-4Q9BYQ2 154 aa6.56□□□□□ -1.36
UFD1-201ENST00000263202 KRTAP20-2Q3LI61 65 aa6.43□□□□□ -1.38
UFD1-201ENST00000263202 KRTAP4-12Q9BQ66 201 aa6.41□□□□□ -1.38
UFD1-201ENST00000263202 HMCN1Q96RW7 5635 aa6.38□□□□□ -1.39
UFD1-201ENST00000263202 KRTAP6-2Q3LI66 62 aa6.32□□□□□ -1.4
UFD1-201ENST00000263202 KRTAP9-9Q9BYP9 154 aa6.32□□□□□ -1.4
UFD1-201ENST00000263202 MT3P25713 68 aa6.23□□□□□ -1.41
UFD1-201ENST00000263202 KRTAP5-3Q6L8H2 238 aa6.21□□□□□ -1.42
UFD1-201ENST00000263202 KRTAP5-2Q701N4 177 aa6.2□□□□□ -1.42
UFD1-201ENST00000263202 GPR98Q8WXG9 6306 aa6.05□□□□□ -1.44
UFD1-201ENST00000263202 A0A0A0MQY5 61 aa5.97□□□□□ -1.45
UFD1-201ENST00000263202 LCE3DQ9BYE3 92 aa5.86□□□□□ -1.47
UFD1-201ENST00000263202 KRTAP4-2Q9BYR5 136 aa5.81□□□□□ -1.48
UFD1-201ENST00000263202 AHNAK2Q8IVF2 5795 aa5.8□□□□□ -1.48
UFD1-201ENST00000263202 INE1O15225 51 aa5.68□□□□□ -1.5
UFD1-201ENST00000263202 OBSCNQ5VST9 7968 aa5.68□□□□□ -1.5
UFD1-201ENST00000263202 LCE3EQ5T5B0 92 aa5.67□□□□□ -1.5
UFD1-201ENST00000263202 KRTAP5-10Q6L8G5 202 aa5.67□□□□□ -1.5
UFD1-201ENST00000263202 KRTAP4-11Q9BYQ6 195 aa5.64□□□□□ -1.51
UFD1-201ENST00000263202 H3BS24 57 aa5.61□□□□□ -1.51
UFD1-201ENST00000263202 LCE1EQ5T753 118 aa5.48□□□□□ -1.53
UFD1-201ENST00000263202 KRTAP5-7Q6L8G8 165 aa5.43□□□□□ -1.54
UFD1-201ENST00000263202 KRTAP5-8O75690 187 aa5.42□□□□□ -1.54
UFD1-201ENST00000263202 KRTAP5-1Q6L8H4 278 aa5.39□□□□□ -1.55
UFD1-201ENST00000263202 LCE1BQ5T7P3 118 aa5.13□□□□□ -1.59
UFD1-201ENST00000263202 LCE1CQ5T751 118 aa5.1□□□□□ -1.59
UFD1-201ENST00000263202 MUC5ACP98088 5654 aa5.08□□□□□ -1.6
UFD1-201ENST00000263202 PRM1P04553 51 aa4.85□□□□□ -1.63
UFD1-201ENST00000263202 MUC5BQ9HC84 5762 aaPredicted RBP4.76□□□□□ -1.65
UFD1-201ENST00000263202 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.76□□□□□ -1.65
UFD1-201ENST00000263202 AHNAKQ09666 5890 aaKnown RBP4.74□□□□□ -1.65
UFD1-201ENST00000263202 KRTAP5-11Q6L8G4 156 aa4.52□□□□□ -1.69
UFD1-201ENST00000263202 KRTAP21-2Q3LI59 83 aa4.48□□□□□ -1.69
UFD1-201ENST00000263202 LCE1FQ5T754 118 aa4.13□□□□□ -1.75
UFD1-201ENST00000263202 KRTAP4-4Q9BYR3 166 aa3.98□□□□□ -1.77
UFD1-201ENST00000263202 PHGR1C9JFL3 82 aa3.88□□□□□ -1.79
UFD1-201ENST00000263202 MUC19Q7Z5P9 8384 aa3.39□□□□□ -1.87
UFD1-201ENST00000263202 KRTAP21-1Q3LI58 79 aa2.93□□□□□ -1.94
UFD1-201ENST00000263202 MUC16Q8WXI7 14507 aa2.49□□□□□ -2.01
Retrieved 77 of 20,778 RNA–protein pairs in 76 ms