RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 KRTAP6-3Q3LI67 103 aa4.57□□□□□ -1.68
VAMP7-201ENST00000262640 LCE3CQ5T5A8 94 aa4.56□□□□□ -1.68
VAMP7-201ENST00000262640 MUC12Q9UKN1 5478 aa4.56□□□□□ -1.68
VAMP7-201ENST00000262640 KRTAP19-3Q7Z4W3 81 aa4.56□□□□□ -1.68
VAMP7-201ENST00000262640 SPRR5A0A1B0GTR4 108 aa4.54□□□□□ -1.68
VAMP7-201ENST00000262640 MT1GP13640 62 aa4.52□□□□□ -1.69
VAMP7-201ENST00000262640 LCE5AQ5TCM9 118 aa4.48□□□□□ -1.69
VAMP7-201ENST00000262640 LOC100996750A0A140TA64 210 aa4.46□□□□□ -1.7
VAMP7-201ENST00000262640 LCE1AQ5T7P2 110 aa4.46□□□□□ -1.7
VAMP7-201ENST00000262640 MT1MQ8N339 61 aa4.46□□□□□ -1.7
VAMP7-201ENST00000262640 KRTAP4-6Q9BYQ5 205 aa4.46□□□□□ -1.7
VAMP7-201ENST00000262640 KRTAP4-7Q9BYR0 210 aa4.46□□□□□ -1.7
VAMP7-201ENST00000262640 SPRR2EP22531 72 aa4.44□□□□□ -1.7
VAMP7-201ENST00000262640 SPRR2BP35325 72 aa4.44□□□□□ -1.7
VAMP7-201ENST00000262640 SPRR2AP35326 72 aa4.44□□□□□ -1.7
VAMP7-201ENST00000262640 MDN1Q9NU22 5596 aa4.42□□□□□ -1.7
VAMP7-201ENST00000262640 KRTAP9-7A8MTY7 169 aa4.41□□□□□ -1.7
VAMP7-201ENST00000262640 LUZP6Q538Z0 58 aa4.38□□□□□ -1.71
VAMP7-201ENST00000262640 KRTAP4-3Q9BYR4 195 aa4.35□□□□□ -1.71
VAMP7-201ENST00000262640 KRTAP9-6A8MVA2 160 aa4.3□□□□□ -1.72
VAMP7-201ENST00000262640 SPRR2DP22532 72 aa4.28□□□□□ -1.72
VAMP7-201ENST00000262640 NDUFAF8A1L188 74 aa4.23□□□□□ -1.73
VAMP7-201ENST00000262640 NEBP20929 6669 aa4.22□□□□□ -1.73
VAMP7-201ENST00000262640 DSTQ03001 7570 aaKnown RBP4.11□□□□□ -1.75
VAMP7-201ENST00000262640 LCE3BQ5TA77 95 aa4.11□□□□□ -1.75
VAMP7-201ENST00000262640 KRTAP5-5Q701N2 237 aaPredicted RBP4.02□□□□□ -1.77
VAMP7-201ENST00000262640 KRTAP2-3P0C7H8 128 aa4□□□□□ -1.77
VAMP7-201ENST00000262640 KRTAP2-4Q9BYR9 128 aa4□□□□□ -1.77
VAMP7-201ENST00000262640 KRTAP2-1Q9BYU5 128 aa3.97□□□□□ -1.77
VAMP7-201ENST00000262640 MT1AP04731 61 aa3.95□□□□□ -1.78
VAMP7-201ENST00000262640 KRTAP20-1Q3LI63 56 aa3.93□□□□□ -1.78
VAMP7-201ENST00000262640 KRTAP2-2Q9BYT5 123 aa3.91□□□□□ -1.78
VAMP7-201ENST00000262640 KRTAP6-1Q3LI64 71 aa3.9□□□□□ -1.79
VAMP7-201ENST00000262640 KRTAP5-4Q6L8H1 288 aa3.86□□□□□ -1.79
VAMP7-201ENST00000262640 LCE4AQ5TA78 99 aa3.81□□□□□ -1.8
VAMP7-201ENST00000262640 KRTAP12-4P60329 112 aa3.76□□□□□ -1.81
VAMP7-201ENST00000262640 KRTAP9-4Q9BYQ2 154 aa3.75□□□□□ -1.81
VAMP7-201ENST00000262640 SYNE1Q8NF91 8797 aaKnown RBP3.75□□□□□ -1.81
VAMP7-201ENST00000262640 MT4P47944 62 aa3.7□□□□□ -1.82
VAMP7-201ENST00000262640 KRTAP4-9Q9BYQ8 210 aa3.66□□□□□ -1.82
VAMP7-201ENST00000262640 KRTAP9-9Q9BYP9 154 aa3.65□□□□□ -1.82
VAMP7-201ENST00000262640 LCE1DQ5T752 114 aa3.64□□□□□ -1.83
VAMP7-201ENST00000262640 KRTAP4-12Q9BQ66 201 aa3.64□□□□□ -1.83
VAMP7-201ENST00000262640 KRTAP20-2Q3LI61 65 aa3.61□□□□□ -1.83
VAMP7-201ENST00000262640 HMCN1Q96RW7 5635 aa3.6□□□□□ -1.83
VAMP7-201ENST00000262640 KRTAP6-2Q3LI66 62 aa3.6□□□□□ -1.83
VAMP7-201ENST00000262640 MT3P25713 68 aa3.59□□□□□ -1.84
VAMP7-201ENST00000262640 INE1O15225 51 aa3.52□□□□□ -1.85
VAMP7-201ENST00000262640 KRTAP5-2Q701N4 177 aa3.5□□□□□ -1.85
VAMP7-201ENST00000262640 KRTAP5-3Q6L8H2 238 aa3.48□□□□□ -1.85
VAMP7-201ENST00000262640 KRTAP4-2Q9BYR5 136 aa3.43□□□□□ -1.86
VAMP7-201ENST00000262640 LCE3DQ9BYE3 92 aa3.43□□□□□ -1.86
VAMP7-201ENST00000262640 LCE3EQ5T5B0 92 aa3.33□□□□□ -1.88
VAMP7-201ENST00000262640 KRTAP4-11Q9BYQ6 195 aa3.27□□□□□ -1.89
VAMP7-201ENST00000262640 AHNAK2Q8IVF2 5795 aa3.22□□□□□ -1.89
VAMP7-201ENST00000262640 OBSCNQ5VST9 7968 aa3.2□□□□□ -1.9
VAMP7-201ENST00000262640 LCE1EQ5T753 118 aa3.12□□□□□ -1.91
VAMP7-201ENST00000262640 KRTAP5-10Q6L8G5 202 aa3.04□□□□□ -1.92
VAMP7-201ENST00000262640 KRTAP5-1Q6L8H4 278 aa3.02□□□□□ -1.93
VAMP7-201ENST00000262640 KRTAP5-8O75690 187 aa3.01□□□□□ -1.93
VAMP7-201ENST00000262640 KRTAP5-7Q6L8G8 165 aa2.93□□□□□ -1.94
VAMP7-201ENST00000262640 LCE1BQ5T7P3 118 aa2.91□□□□□ -1.94
VAMP7-201ENST00000262640 MUC5ACP98088 5654 aa2.91□□□□□ -1.94
VAMP7-201ENST00000262640 LCE1CQ5T751 118 aa2.91□□□□□ -1.94
VAMP7-201ENST00000262640 GPR98Q8WXG9 6306 aa2.9□□□□□ -1.94
VAMP7-201ENST00000262640 PRM1P04553 51 aa2.88□□□□□ -1.95
VAMP7-201ENST00000262640 LCE1FQ5T754 118 aa2.74□□□□□ -1.97
VAMP7-201ENST00000262640 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.72□□□□□ -1.97
VAMP7-201ENST00000262640 MUC5BQ9HC84 5762 aaPredicted RBP2.61□□□□□ -1.99
VAMP7-201ENST00000262640 KRTAP5-11Q6L8G4 156 aa2.57□□□□□ -2
VAMP7-201ENST00000262640 KRTAP21-2Q3LI59 83 aa2.56□□□□□ -2
VAMP7-201ENST00000262640 AHNAKQ09666 5890 aaKnown RBP2.46□□□□□ -2.02
VAMP7-201ENST00000262640 KRTAP4-4Q9BYR3 166 aa2.26□□□□□ -2.05
VAMP7-201ENST00000262640 PHGR1C9JFL3 82 aa2.2□□□□□ -2.06
VAMP7-201ENST00000262640 MUC19Q7Z5P9 8384 aa1.89□□□□□ -2.11
VAMP7-201ENST00000262640 KRTAP21-1Q3LI58 79 aa1.76□□□□□ -2.13
VAMP7-201ENST00000262640 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 113.5 ms