RNA–Protein interactions for RNA: ENST00000262580.8

GSDMD-201, Transcript of gasdermin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GSDMD, Length 1,762 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-201ENST00000262580 LCE3CQ5T5A8 94 aa6.44□□□□□ -1.38
GSDMD-201ENST00000262580 KRTAP19-3Q7Z4W3 81 aa6.44□□□□□ -1.38
GSDMD-201ENST00000262580 KRTAP6-3Q3LI67 103 aa6.41□□□□□ -1.38
GSDMD-201ENST00000262580 LUZP6Q538Z0 58 aa6.41□□□□□ -1.38
GSDMD-201ENST00000262580 SPRR5A0A1B0GTR4 108 aa6.4□□□□□ -1.38
GSDMD-201ENST00000262580 KRTAP4-7Q9BYR0 210 aa6.39□□□□□ -1.39
GSDMD-201ENST00000262580 MDN1Q9NU22 5596 aa6.38□□□□□ -1.39
GSDMD-201ENST00000262580 KRTAP19-4Q3LI73 84 aa6.35□□□□□ -1.39
GSDMD-201ENST00000262580 MT1GP13640 62 aa6.34□□□□□ -1.39
GSDMD-201ENST00000262580 LCE5AQ5TCM9 118 aa6.33□□□□□ -1.4
GSDMD-201ENST00000262580 LCE1AQ5T7P2 110 aa6.31□□□□□ -1.4
GSDMD-201ENST00000262580 MT1MQ8N339 61 aa6.31□□□□□ -1.4
GSDMD-201ENST00000262580 SPRR2EP22531 72 aa6.27□□□□□ -1.41
GSDMD-201ENST00000262580 SPRR2BP35325 72 aa6.27□□□□□ -1.41
GSDMD-201ENST00000262580 SPRR2AP35326 72 aa6.27□□□□□ -1.41
GSDMD-201ENST00000262580 KRTAP4-3Q9BYR4 195 aa6.23□□□□□ -1.41
GSDMD-201ENST00000262580 KRTAP9-7A8MTY7 169 aa6.23□□□□□ -1.41
GSDMD-201ENST00000262580 KRTAP9-6A8MVA2 160 aa6.13□□□□□ -1.43
GSDMD-201ENST00000262580 NEBP20929 6669 aa6.06□□□□□ -1.44
GSDMD-201ENST00000262580 SPRR2DP22532 72 aa6.03□□□□□ -1.44
GSDMD-201ENST00000262580 DSTQ03001 7570 aaKnown RBP6.01□□□□□ -1.45
GSDMD-201ENST00000262580 LOC100996750A0A140TA64 210 aa6.01□□□□□ -1.45
GSDMD-201ENST00000262580 A0A0A0MQY5 61 aa5.95□□□□□ -1.46
GSDMD-201ENST00000262580 LCE3BQ5TA77 95 aa5.8□□□□□ -1.48
GSDMD-201ENST00000262580 KRTAP5-5Q701N2 237 aaPredicted RBP5.7□□□□□ -1.5
GSDMD-201ENST00000262580 KRTAP2-3P0C7H8 128 aa5.6□□□□□ -1.51
GSDMD-201ENST00000262580 KRTAP2-4Q9BYR9 128 aa5.6□□□□□ -1.51
GSDMD-201ENST00000262580 KRTAP2-1Q9BYU5 128 aa5.6□□□□□ -1.51
GSDMD-201ENST00000262580 MT1AP04731 61 aa5.56□□□□□ -1.52
GSDMD-201ENST00000262580 KRTAP6-1Q3LI64 71 aa5.55□□□□□ -1.52
GSDMD-201ENST00000262580 KRTAP20-1Q3LI63 56 aa5.52□□□□□ -1.53
GSDMD-201ENST00000262580 INE1O15225 51 aa5.48□□□□□ -1.53
GSDMD-201ENST00000262580 KRTAP2-2Q9BYT5 123 aa5.47□□□□□ -1.53
GSDMD-201ENST00000262580 KRTAP5-4Q6L8H1 288 aa5.44□□□□□ -1.54
GSDMD-201ENST00000262580 SYNE1Q8NF91 8797 aaKnown RBP5.43□□□□□ -1.54
GSDMD-201ENST00000262580 LCE4AQ5TA78 99 aa5.32□□□□□ -1.56
GSDMD-201ENST00000262580 KRTAP9-4Q9BYQ2 154 aa5.28□□□□□ -1.56
GSDMD-201ENST00000262580 MT4P47944 62 aa5.27□□□□□ -1.57
GSDMD-201ENST00000262580 KRTAP12-4P60329 112 aa5.25□□□□□ -1.57
GSDMD-201ENST00000262580 KRTAP4-9Q9BYQ8 210 aa5.23□□□□□ -1.57
GSDMD-201ENST00000262580 KRTAP4-6Q9BYQ5 205 aa5.22□□□□□ -1.57
GSDMD-201ENST00000262580 LCE1DQ5T752 114 aa5.17□□□□□ -1.58
GSDMD-201ENST00000262580 HMCN1Q96RW7 5635 aa5.15□□□□□ -1.59
GSDMD-201ENST00000262580 KRTAP20-2Q3LI61 65 aa5.1□□□□□ -1.59
GSDMD-201ENST00000262580 KRTAP6-2Q3LI66 62 aa5.1□□□□□ -1.59
GSDMD-201ENST00000262580 MT3P25713 68 aa5.01□□□□□ -1.61
GSDMD-201ENST00000262580 KRTAP5-2Q701N4 177 aa4.93□□□□□ -1.62
GSDMD-201ENST00000262580 KRTAP5-3Q6L8H2 238 aa4.91□□□□□ -1.62
GSDMD-201ENST00000262580 LCE3DQ9BYE3 92 aa4.81□□□□□ -1.64
GSDMD-201ENST00000262580 LCE3EQ5T5B0 92 aa4.68□□□□□ -1.66
GSDMD-201ENST00000262580 OBSCNQ5VST9 7968 aa4.64□□□□□ -1.67
GSDMD-201ENST00000262580 AHNAK2Q8IVF2 5795 aa4.58□□□□□ -1.68
GSDMD-201ENST00000262580 GPR98Q8WXG9 6306 aa4.48□□□□□ -1.69
GSDMD-201ENST00000262580 KRTAP4-11Q9BYQ6 195 aa4.42□□□□□ -1.7
GSDMD-201ENST00000262580 LCE1EQ5T753 118 aa4.35□□□□□ -1.71
GSDMD-201ENST00000262580 KRTAP5-10Q6L8G5 202 aa4.3□□□□□ -1.72
GSDMD-201ENST00000262580 KRTAP5-1Q6L8H4 278 aa4.28□□□□□ -1.72
GSDMD-201ENST00000262580 KRTAP5-8O75690 187 aa4.27□□□□□ -1.73
GSDMD-201ENST00000262580 MUC5ACP98088 5654 aa4.17□□□□□ -1.74
GSDMD-201ENST00000262580 LCE1BQ5T7P3 118 aa4.14□□□□□ -1.75
GSDMD-201ENST00000262580 KRTAP4-2Q9BYR5 136 aa4.11□□□□□ -1.75
GSDMD-201ENST00000262580 PRM1P04553 51 aa4.1□□□□□ -1.75
GSDMD-201ENST00000262580 KRTAP5-7Q6L8G8 165 aa4.1□□□□□ -1.75
GSDMD-201ENST00000262580 LCE1CQ5T751 118 aa4.07□□□□□ -1.76
GSDMD-201ENST00000262580 KRTAP9-9Q9BYP9 154 aa3.82□□□□□ -1.8
GSDMD-201ENST00000262580 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.81□□□□□ -1.8
GSDMD-201ENST00000262580 MUC5BQ9HC84 5762 aaPredicted RBP3.69□□□□□ -1.82
GSDMD-201ENST00000262580 KRTAP21-2Q3LI59 83 aa3.62□□□□□ -1.83
GSDMD-201ENST00000262580 KRTAP5-11Q6L8G4 156 aa3.6□□□□□ -1.83
GSDMD-201ENST00000262580 AHNAKQ09666 5890 aaKnown RBP3.47□□□□□ -1.85
GSDMD-201ENST00000262580 KRTAP4-12Q9BQ66 201 aa3.45□□□□□ -1.86
GSDMD-201ENST00000262580 KRTAP4-4Q9BYR3 166 aa3.25□□□□□ -1.89
GSDMD-201ENST00000262580 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
GSDMD-201ENST00000262580 PHGR1C9JFL3 82 aa3.09□□□□□ -1.91
GSDMD-201ENST00000262580 MUC19Q7Z5P9 8384 aa2.77□□□□□ -1.97
GSDMD-201ENST00000262580 KRTAP21-1Q3LI58 79 aa2.57□□□□□ -2
GSDMD-201ENST00000262580 MUC16Q8WXI7 14507 aa1.98□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 7 ms