RNA–Protein interactions for RNA: ENST00000261776.9

VAC14-201, Transcript of Vac14, PIKFYVE complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAC14, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-201ENST00000261776 SYNE1Q8NF91 8797 aaKnown RBP5.83□□□□□ -1.48
VAC14-201ENST00000261776 OBSCNQ5VST9 7968 aa5.8□□□□□ -1.48
VAC14-201ENST00000261776 MT1LQ93083 61 aa5.8□□□□□ -1.48
VAC14-201ENST00000261776 MT1EP04732 61 aa5.78□□□□□ -1.48
VAC14-201ENST00000261776 MT1GP13640 62 aa5.72□□□□□ -1.49
VAC14-201ENST00000261776 KRTAP2-3P0C7H8 128 aa5.71□□□□□ -1.5
VAC14-201ENST00000261776 KRTAP2-4Q9BYR9 128 aa5.71□□□□□ -1.5
VAC14-201ENST00000261776 KRTAP2-1Q9BYU5 128 aa5.71□□□□□ -1.5
VAC14-201ENST00000261776 SYNE2Q8WXH0 6885 aaKnown RBP5.63□□□□□ -1.51
VAC14-201ENST00000261776 MACF1Q9UPN3 7388 aaKnown RBP5.58□□□□□ -1.52
VAC14-201ENST00000261776 KRTAP19-6Q3LI70 58 aa5.48□□□□□ -1.53
VAC14-201ENST00000261776 SPRR2FQ96RM1 72 aa5.47□□□□□ -1.53
VAC14-201ENST00000261776 MDN1Q9NU22 5596 aa5.45□□□□□ -1.54
VAC14-201ENST00000261776 MT1MQ8N339 61 aa5.43□□□□□ -1.54
VAC14-201ENST00000261776 KRTAP12-4P60329 112 aa5.41□□□□□ -1.54
VAC14-201ENST00000261776 KRTAP19-3Q7Z4W3 81 aa5.39□□□□□ -1.55
VAC14-201ENST00000261776 LCE3BQ5TA77 95 aa5.37□□□□□ -1.55
VAC14-201ENST00000261776 KRTAP4-9Q9BYQ8 210 aa5.37□□□□□ -1.55
VAC14-201ENST00000261776 KRTAP19-4Q3LI73 84 aa5.23□□□□□ -1.57
VAC14-201ENST00000261776 LCE5AQ5TCM9 118 aa5.13□□□□□ -1.59
VAC14-201ENST00000261776 KRTAP6-1Q3LI64 71 aa5.05□□□□□ -1.6
VAC14-201ENST00000261776 SPRR2EP22531 72 aa4.89□□□□□ -1.63
VAC14-201ENST00000261776 SPRR2BP35325 72 aa4.89□□□□□ -1.63
VAC14-201ENST00000261776 SPRR2AP35326 72 aa4.89□□□□□ -1.63
VAC14-201ENST00000261776 KRTAP9-7A8MTY7 169 aa4.88□□□□□ -1.63
VAC14-201ENST00000261776 KRTAP9-2Q9BYQ4 174 aa4.86□□□□□ -1.63
VAC14-201ENST00000261776 LCE3DQ9BYE3 92 aa4.86□□□□□ -1.63
VAC14-201ENST00000261776 LCE1AQ5T7P2 110 aa4.84□□□□□ -1.63
VAC14-201ENST00000261776 PRM1P04553 51 aa4.83□□□□□ -1.64
VAC14-201ENST00000261776 LCE3EQ5T5B0 92 aa4.78□□□□□ -1.64
VAC14-201ENST00000261776 MT1AP04731 61 aa4.76□□□□□ -1.65
VAC14-201ENST00000261776 KRTAP5-5Q701N2 237 aaPredicted RBP4.68□□□□□ -1.66
VAC14-201ENST00000261776 SPRR2DP22532 72 aa4.63□□□□□ -1.67
VAC14-201ENST00000261776 KRTAP6-2Q3LI66 62 aa4.57□□□□□ -1.68
VAC14-201ENST00000261776 KRTAP5-9P26371 169 aa4.54□□□□□ -1.68
VAC14-201ENST00000261776 KRTAP9-4Q9BYQ2 154 aa4.51□□□□□ -1.69
VAC14-201ENST00000261776 MT3P25713 68 aa4.34□□□□□ -1.71
VAC14-201ENST00000261776 MT4P47944 62 aa4.34□□□□□ -1.71
VAC14-201ENST00000261776 KRTAP9-6A0A140TA67 174 aa4.34□□□□□ -1.72
VAC14-201ENST00000261776 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.31□□□□□ -1.72
VAC14-201ENST00000261776 KRTAP6-3Q3LI67 103 aa4.26□□□□□ -1.73
VAC14-201ENST00000261776 KRTAP4-6Q9BYQ5 205 aa4.24□□□□□ -1.73
VAC14-201ENST00000261776 KRTAP2-2Q9BYT5 123 aa4.19□□□□□ -1.74
VAC14-201ENST00000261776 NEBP20929 6669 aa4.16□□□□□ -1.74
VAC14-201ENST00000261776 HMCN1Q96RW7 5635 aa4.05□□□□□ -1.76
VAC14-201ENST00000261776 LCE1DQ5T752 114 aa3.99□□□□□ -1.77
VAC14-201ENST00000261776 LCE1EQ5T753 118 aa3.95□□□□□ -1.78
VAC14-201ENST00000261776 KRTAP5-4Q6L8H1 288 aa3.9□□□□□ -1.78
VAC14-201ENST00000261776 KRTAP20-2Q3LI61 65 aa3.9□□□□□ -1.79
VAC14-201ENST00000261776 LCE1BQ5T7P3 118 aa3.9□□□□□ -1.79
VAC14-201ENST00000261776 MUC5ACP98088 5654 aa3.89□□□□□ -1.79
VAC14-201ENST00000261776 MUC19Q7Z5P9 8384 aa3.71□□□□□ -1.82
VAC14-201ENST00000261776 KRTAP4-11Q9BYQ6 195 aa3.7□□□□□ -1.82
VAC14-201ENST00000261776 LCE4AQ5TA78 99 aa3.67□□□□□ -1.82
VAC14-201ENST00000261776 KRTAP5-2Q701N4 177 aa3.64□□□□□ -1.83
VAC14-201ENST00000261776 KRTAP5-3Q6L8H2 238 aa3.57□□□□□ -1.84
VAC14-201ENST00000261776 KRTAP20-1Q3LI63 56 aa3.52□□□□□ -1.85
VAC14-201ENST00000261776 KRTAP9-9Q9BYP9 154 aa3.52□□□□□ -1.85
VAC14-201ENST00000261776 KRTAP4-12Q9BQ66 201 aa3.46□□□□□ -1.86
VAC14-201ENST00000261776 KRTAP5-10Q6L8G5 202 aa3.42□□□□□ -1.86
VAC14-201ENST00000261776 LCE1FQ5T754 118 aa3.41□□□□□ -1.86
VAC14-201ENST00000261776 KRTAP4-4Q9BYR3 166 aa3.35□□□□□ -1.87
VAC14-201ENST00000261776 KRTAP4-2Q9BYR5 136 aa3.32□□□□□ -1.88
VAC14-201ENST00000261776 MUC5BQ9HC84 5762 aaPredicted RBP3.29□□□□□ -1.88
VAC14-201ENST00000261776 AHNAK2Q8IVF2 5795 aa3.25□□□□□ -1.89
VAC14-201ENST00000261776 KRTAP5-1Q6L8H4 278 aa3.23□□□□□ -1.89
VAC14-201ENST00000261776 LCE1CQ5T751 118 aa3.17□□□□□ -1.9
VAC14-201ENST00000261776 KRTAP21-2Q3LI59 83 aa3.12□□□□□ -1.91
VAC14-201ENST00000261776 KRTAP5-8O75690 187 aa3.01□□□□□ -1.93
VAC14-201ENST00000261776 KRTAP21-1Q3LI58 79 aa2.86□□□□□ -1.95
VAC14-201ENST00000261776 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.83□□□□□ -1.96
VAC14-201ENST00000261776 GPR98Q8WXG9 6306 aa2.81□□□□□ -1.96
VAC14-201ENST00000261776 KRTAP5-7Q6L8G8 165 aa2.7□□□□□ -1.98
VAC14-201ENST00000261776 KRTAP5-11Q6L8G4 156 aa2.67□□□□□ -1.98
VAC14-201ENST00000261776 AHNAKQ09666 5890 aaKnown RBP2.4□□□□□ -2.03
VAC14-201ENST00000261776 PHGR1C9JFL3 82 aa2.38□□□□□ -2.03
VAC14-201ENST00000261776 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 116 ms