RNA–Protein interactions for RNA: ENST00000261177.9

TSPAN11-201, Transcript of tetraspanin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN11, Length 5,505 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN11-201ENST00000261177 LOC100996750A0A140TA64 210 aa4.46□□□□□ -1.69
TSPAN11-201ENST00000261177 KRTAP19-7Q3SYF9 63 aa4.46□□□□□ -1.7
TSPAN11-201ENST00000261177 EPPK1P58107 5090 aaKnown RBP4.45□□□□□ -1.7
TSPAN11-201ENST00000261177 LCE2AQ5TA79 106 aaPredicted RBP4.45□□□□□ -1.7
TSPAN11-201ENST00000261177 KRTAP4-3Q9BYR4 195 aa4.42□□□□□ -1.7
TSPAN11-201ENST00000261177 KRTAP2-3P0C7H8 128 aa4.38□□□□□ -1.71
TSPAN11-201ENST00000261177 KRTAP2-4Q9BYR9 128 aa4.38□□□□□ -1.71
TSPAN11-201ENST00000261177 KRTAP2-1Q9BYU5 128 aa4.38□□□□□ -1.71
TSPAN11-201ENST00000261177 KRTAP9-2Q9BYQ4 174 aa4.37□□□□□ -1.71
TSPAN11-201ENST00000261177 MT1AP04731 61 aa4.36□□□□□ -1.71
TSPAN11-201ENST00000261177 MT4P47944 62 aa4.34□□□□□ -1.71
TSPAN11-201ENST00000261177 RNF213Q63HN8 5207 aa4.33□□□□□ -1.72
TSPAN11-201ENST00000261177 FAT4Q6V0I7 4981 aa4.33□□□□□ -1.72
TSPAN11-201ENST00000261177 HMCN2Q8NDA2 5059 aa4.3□□□□□ -1.72
TSPAN11-201ENST00000261177 LCE1DQ5T752 114 aa4.19□□□□□ -1.74
TSPAN11-201ENST00000261177 LCE1BQ5T7P3 118 aa4.18□□□□□ -1.74
TSPAN11-201ENST00000261177 UBR4Q5T4S7 5183 aa4.17□□□□□ -1.74
TSPAN11-201ENST00000261177 LCE1AQ5T7P2 110 aa4.16□□□□□ -1.74
TSPAN11-201ENST00000261177 KRTAP4-9Q9BYQ8 210 aa4.11□□□□□ -1.75
TSPAN11-201ENST00000261177 KRTAP9-6A0A140TA67 174 aa4.1□□□□□ -1.75
TSPAN11-201ENST00000261177 KRTAP9-6A8MVA2 160 aa4.08□□□□□ -1.76
TSPAN11-201ENST00000261177 LCE5AQ5TCM9 118 aa4.06□□□□□ -1.76
TSPAN11-201ENST00000261177 SYNE1Q8NF91 8797 aaKnown RBP4.06□□□□□ -1.76
TSPAN11-201ENST00000261177 KRTAP6-1Q3LI64 71 aa4.04□□□□□ -1.76
TSPAN11-201ENST00000261177 KRTAP6-3Q3LI67 103 aa4.03□□□□□ -1.76
TSPAN11-201ENST00000261177 KRTAP9-4Q9BYQ2 154 aa4.02□□□□□ -1.77
TSPAN11-201ENST00000261177 FSIP2Q5CZC0 6907 aa4□□□□□ -1.77
TSPAN11-201ENST00000261177 KRTAP6-2Q3LI66 62 aa3.96□□□□□ -1.77
TSPAN11-201ENST00000261177 KRTAP20-1Q3LI63 56 aa3.96□□□□□ -1.78
TSPAN11-201ENST00000261177 MUC2Q02817 5179 aa3.95□□□□□ -1.78
TSPAN11-201ENST00000261177 LCE4AQ5TA78 99 aa3.93□□□□□ -1.78
TSPAN11-201ENST00000261177 KRTAP9-7A8MTY7 169 aa3.89□□□□□ -1.79
TSPAN11-201ENST00000261177 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.82□□□□□ -1.8
TSPAN11-201ENST00000261177 SYNE2Q8WXH0 6885 aaKnown RBP3.81□□□□□ -1.8
TSPAN11-201ENST00000261177 OBSCNQ5VST9 7968 aa3.79□□□□□ -1.8
TSPAN11-201ENST00000261177 KRTAP2-2Q9BYT5 123 aa3.77□□□□□ -1.81
TSPAN11-201ENST00000261177 USH2AO75445 5202 aa3.58□□□□□ -1.84
TSPAN11-201ENST00000261177 KRTAP5-9P26371 169 aa3.51□□□□□ -1.85
TSPAN11-201ENST00000261177 LCE1CQ5T751 118 aa3.51□□□□□ -1.85
TSPAN11-201ENST00000261177 LCE1EQ5T753 118 aa3.51□□□□□ -1.85
TSPAN11-201ENST00000261177 LCE1FQ5T754 118 aa3.51□□□□□ -1.85
TSPAN11-201ENST00000261177 FCGBPQ9Y6R7 5405 aaPredicted RBP3.46□□□□□ -1.86
TSPAN11-201ENST00000261177 MACF1Q9UPN3 7388 aaKnown RBP3.38□□□□□ -1.87
TSPAN11-201ENST00000261177 KMT2DO14686 5537 aa3.35□□□□□ -1.87
TSPAN11-201ENST00000261177 DSTQ03001 7570 aaKnown RBP3.35□□□□□ -1.87
TSPAN11-201ENST00000261177 SSPOA2VEC9 5147 aa3.34□□□□□ -1.88
TSPAN11-201ENST00000261177 KRTAP9-9Q9BYP9 154 aa3.32□□□□□ -1.88
TSPAN11-201ENST00000261177 KRTAP20-2Q3LI61 65 aa3.29□□□□□ -1.88
TSPAN11-201ENST00000261177 KRTAP4-6Q9BYQ5 205 aa3.26□□□□□ -1.89
TSPAN11-201ENST00000261177 KRTAP4-11Q9BYQ6 195 aa3.26□□□□□ -1.89
TSPAN11-201ENST00000261177 NEBP20929 6669 aa3.23□□□□□ -1.89
TSPAN11-201ENST00000261177 GPR98Q8WXG9 6306 aa3.11□□□□□ -1.91
TSPAN11-201ENST00000261177 MUC12Q9UKN1 5478 aa3.11□□□□□ -1.91
TSPAN11-201ENST00000261177 MDN1Q9NU22 5596 aa3.1□□□□□ -1.91
TSPAN11-201ENST00000261177 KRTAP5-4Q6L8H1 288 aa3.09□□□□□ -1.91
TSPAN11-201ENST00000261177 KRTAP5-5Q701N2 237 aaPredicted RBP3.07□□□□□ -1.92
TSPAN11-201ENST00000261177 MUC19Q7Z5P9 8384 aa2.91□□□□□ -1.94
TSPAN11-201ENST00000261177 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
TSPAN11-201ENST00000261177 KRTAP4-12Q9BQ66 201 aa2.83□□□□□ -1.96
TSPAN11-201ENST00000261177 KRTAP4-2Q9BYR5 136 aa2.83□□□□□ -1.96
TSPAN11-201ENST00000261177 KRTAP5-3Q6L8H2 238 aa2.69□□□□□ -1.98
TSPAN11-201ENST00000261177 MUC5ACP98088 5654 aa2.53□□□□□ -2
TSPAN11-201ENST00000261177 KRTAP5-2Q701N4 177 aa2.48□□□□□ -2.01
TSPAN11-201ENST00000261177 KRTAP5-10Q6L8G5 202 aa2.47□□□□□ -2.01
TSPAN11-201ENST00000261177 AHNAK2Q8IVF2 5795 aa2.41□□□□□ -2.02
TSPAN11-201ENST00000261177 HMCN1Q96RW7 5635 aa2.4□□□□□ -2.03
TSPAN11-201ENST00000261177 KRTAP5-8O75690 187 aa2.39□□□□□ -2.03
TSPAN11-201ENST00000261177 KRTAP5-11Q6L8G4 156 aa2.22□□□□□ -2.05
TSPAN11-201ENST00000261177 MUC5BQ9HC84 5762 aaPredicted RBP2.2□□□□□ -2.06
TSPAN11-201ENST00000261177 KRTAP5-1Q6L8H4 278 aa2.16□□□□□ -2.06
TSPAN11-201ENST00000261177 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
TSPAN11-201ENST00000261177 PHGR1C9JFL3 82 aa2.09□□□□□ -2.07
TSPAN11-201ENST00000261177 KRTAP21-1Q3LI58 79 aa2.04□□□□□ -2.08
TSPAN11-201ENST00000261177 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.02□□□□□ -2.09
TSPAN11-201ENST00000261177 AHNAKQ09666 5890 aaKnown RBP2.01□□□□□ -2.09
TSPAN11-201ENST00000261177 KRTAP5-7Q6L8G8 165 aa1.98□□□□□ -2.09
TSPAN11-201ENST00000261177 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 98.2 ms