RNA–Protein interactions for RNA: ENST00000252575.10

NCAN-201, Transcript of neurocan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCAN, Length 6,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAN-201ENST00000252575 KRTAP19-2Q3LHN2 52 aa5.44□□□□□ -1.54
NCAN-201ENST00000252575 KRTAP19-6Q3LI70 58 aa5.42□□□□□ -1.54
NCAN-201ENST00000252575 KRTAP9-6A0A140TA67 174 aa5.42□□□□□ -1.54
NCAN-201ENST00000252575 FLGP20930 4061 aaPredicted RBP5.34□□□□□ -1.55
NCAN-201ENST00000252575 LCE5AQ5TCM9 118 aa5.33□□□□□ -1.56
NCAN-201ENST00000252575 KMT2CQ8NEZ4 4911 aaKnown RBP5.33□□□□□ -1.56
NCAN-201ENST00000252575 MUC17Q685J3 4493 aa5.31□□□□□ -1.56
NCAN-201ENST00000252575 KRTAP20-1Q3LI63 56 aa5.29□□□□□ -1.56
NCAN-201ENST00000252575 KRTAP4-9Q9BYQ8 210 aa5.29□□□□□ -1.56
NCAN-201ENST00000252575 SYNE2Q8WXH0 6885 aaKnown RBP5.17□□□□□ -1.58
NCAN-201ENST00000252575 KRTAP9-7A8MTY7 169 aa5.14□□□□□ -1.59
NCAN-201ENST00000252575 EPPK1P58107 5090 aaKnown RBP5.11□□□□□ -1.59
NCAN-201ENST00000252575 MT1AP04731 61 aa5.1□□□□□ -1.59
NCAN-201ENST00000252575 FSIP2Q5CZC0 6907 aa5.08□□□□□ -1.6
NCAN-201ENST00000252575 KRTAP19-7Q3SYF9 63 aa5.07□□□□□ -1.6
NCAN-201ENST00000252575 LCE2AQ5TA79 106 aaPredicted RBP5.06□□□□□ -1.6
NCAN-201ENST00000252575 KRTAP2-3P0C7H8 128 aa5.04□□□□□ -1.6
NCAN-201ENST00000252575 KRTAP2-4Q9BYR9 128 aa5.04□□□□□ -1.6
NCAN-201ENST00000252575 KRTAP2-1Q9BYU5 128 aa5.04□□□□□ -1.6
NCAN-201ENST00000252575 LCE1CQ5T751 118 aa4.95□□□□□ -1.62
NCAN-201ENST00000252575 LCE1EQ5T753 118 aa4.95□□□□□ -1.62
NCAN-201ENST00000252575 LCE1FQ5T754 118 aa4.95□□□□□ -1.62
NCAN-201ENST00000252575 LCE1AQ5T7P2 110 aa4.95□□□□□ -1.62
NCAN-201ENST00000252575 KRTAP6-2Q3LI66 62 aa4.95□□□□□ -1.62
NCAN-201ENST00000252575 KRTAP6-1Q3LI64 71 aa4.89□□□□□ -1.63
NCAN-201ENST00000252575 ABCA13Q86UQ4 5058 aa4.89□□□□□ -1.63
NCAN-201ENST00000252575 HMCN2Q8NDA2 5059 aa4.88□□□□□ -1.63
NCAN-201ENST00000252575 KRTAP6-3Q3LI67 103 aa4.87□□□□□ -1.63
NCAN-201ENST00000252575 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.85□□□□□ -1.63
NCAN-201ENST00000252575 FAT4Q6V0I7 4981 aa4.84□□□□□ -1.63
NCAN-201ENST00000252575 KRTAP9-4Q9BYQ2 154 aa4.78□□□□□ -1.64
NCAN-201ENST00000252575 MUC2Q02817 5179 aa4.76□□□□□ -1.65
NCAN-201ENST00000252575 LCE4AQ5TA78 99 aa4.74□□□□□ -1.65
NCAN-201ENST00000252575 KRTAP2-2Q9BYT5 123 aa4.73□□□□□ -1.65
NCAN-201ENST00000252575 RNF213Q63HN8 5207 aa4.72□□□□□ -1.65
NCAN-201ENST00000252575 SYNE1Q8NF91 8797 aaKnown RBP4.71□□□□□ -1.65
NCAN-201ENST00000252575 UBR4Q5T4S7 5183 aa4.66□□□□□ -1.66
NCAN-201ENST00000252575 KRTAP9-6A8MVA2 160 aa4.62□□□□□ -1.67
NCAN-201ENST00000252575 OBSCNQ5VST9 7968 aa4.54□□□□□ -1.68
NCAN-201ENST00000252575 KRTAP9-9Q9BYP9 154 aa4.41□□□□□ -1.7
NCAN-201ENST00000252575 KRTAP4-6Q9BYQ5 205 aa4.15□□□□□ -1.75
NCAN-201ENST00000252575 KRTAP4-11Q9BYQ6 195 aa4.13□□□□□ -1.75
NCAN-201ENST00000252575 FCGBPQ9Y6R7 5405 aaPredicted RBP4.06□□□□□ -1.76
NCAN-201ENST00000252575 DSTQ03001 7570 aaKnown RBP4.06□□□□□ -1.76
NCAN-201ENST00000252575 KMT2DO14686 5537 aa4.06□□□□□ -1.76
NCAN-201ENST00000252575 KRTAP20-2Q3LI61 65 aa4.04□□□□□ -1.76
NCAN-201ENST00000252575 USH2AO75445 5202 aa4.04□□□□□ -1.76
NCAN-201ENST00000252575 KRTAP4-4Q9BYR3 166 aa4.01□□□□□ -1.77
NCAN-201ENST00000252575 KRTAP4-12Q9BQ66 201 aa3.98□□□□□ -1.77
NCAN-201ENST00000252575 KRTAP4-2Q9BYR5 136 aa3.98□□□□□ -1.77
NCAN-201ENST00000252575 MACF1Q9UPN3 7388 aaKnown RBP3.98□□□□□ -1.77
NCAN-201ENST00000252575 NEBP20929 6669 aa3.96□□□□□ -1.78
NCAN-201ENST00000252575 KRTAP5-9P26371 169 aa3.87□□□□□ -1.79
NCAN-201ENST00000252575 SSPOA2VEC9 5147 aa3.78□□□□□ -1.8
NCAN-201ENST00000252575 KRTAP5-4Q6L8H1 288 aa3.59□□□□□ -1.84
NCAN-201ENST00000252575 MUC12Q9UKN1 5478 aa3.51□□□□□ -1.85
NCAN-201ENST00000252575 MUC19Q7Z5P9 8384 aa3.44□□□□□ -1.86
NCAN-201ENST00000252575 MDN1Q9NU22 5596 aa3.42□□□□□ -1.86
NCAN-201ENST00000252575 KRTAP5-5Q701N2 237 aaPredicted RBP3.36□□□□□ -1.87
NCAN-201ENST00000252575 KRTAP5-3Q6L8H2 238 aa3.19□□□□□ -1.9
NCAN-201ENST00000252575 GPR98Q8WXG9 6306 aa3.17□□□□□ -1.9
NCAN-201ENST00000252575 MUC5ACP98088 5654 aa3.01□□□□□ -1.93
NCAN-201ENST00000252575 KRTAP5-8O75690 187 aa2.99□□□□□ -1.93
NCAN-201ENST00000252575 PHGR1C9JFL3 82 aa2.97□□□□□ -1.93
NCAN-201ENST00000252575 HMCN1Q96RW7 5635 aa2.77□□□□□ -1.97
NCAN-201ENST00000252575 KRTAP5-10Q6L8G5 202 aa2.67□□□□□ -1.98
NCAN-201ENST00000252575 KRTAP5-2Q701N4 177 aa2.58□□□□□ -2
NCAN-201ENST00000252575 AHNAK2Q8IVF2 5795 aa2.53□□□□□ -2
NCAN-201ENST00000252575 MUC5BQ9HC84 5762 aaPredicted RBP2.5□□□□□ -2.01
NCAN-201ENST00000252575 KRTAP5-1Q6L8H4 278 aa2.49□□□□□ -2.01
NCAN-201ENST00000252575 KRTAP5-11Q6L8G4 156 aa2.36□□□□□ -2.03
NCAN-201ENST00000252575 AHNAKQ09666 5890 aaKnown RBP2.29□□□□□ -2.04
NCAN-201ENST00000252575 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
NCAN-201ENST00000252575 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.99□□□□□ -2.09
NCAN-201ENST00000252575 KRTAP21-1Q3LI58 79 aa1.98□□□□□ -2.09
NCAN-201ENST00000252575 KRTAP5-7Q6L8G8 165 aa1.88□□□□□ -2.11
NCAN-201ENST00000252575 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 302.6 ms