RNA–Protein interactions for RNA: ENST00000252487.9

TOMM40-201, Transcript of translocase of outer mitochondrial membrane 40, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TOMM40, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40-201ENST00000252487 SPRR2BP35325 72 aa9.36□□□□□ -0.91
TOMM40-201ENST00000252487 SPRR2AP35326 72 aa9.36□□□□□ -0.91
TOMM40-201ENST00000252487 LCE1AQ5T7P2 110 aa9.36□□□□□ -0.91
TOMM40-201ENST00000252487 MT1LQ93083 61 aa9.33□□□□□ -0.92
TOMM40-201ENST00000252487 NEBP20929 6669 aa9.29□□□□□ -0.92
TOMM40-201ENST00000252487 KRTAP19-3Q7Z4W3 81 aa9.28□□□□□ -0.92
TOMM40-201ENST00000252487 KRTAP15-1Q3LI76 137 aa9.26□□□□□ -0.93
TOMM40-201ENST00000252487 LCE5AQ5TCM9 118 aa9.17□□□□□ -0.94
TOMM40-201ENST00000252487 MT1GP13640 62 aa9.12□□□□□ -0.95
TOMM40-201ENST00000252487 MT1MQ8N339 61 aa9.06□□□□□ -0.96
TOMM40-201ENST00000252487 KRTAP4-7Q9BYR0 210 aa9.05□□□□□ -0.96
TOMM40-201ENST00000252487 SPRR2DP22532 72 aa9.03□□□□□ -0.96
TOMM40-201ENST00000252487 KRTAP4-3Q9BYR4 195 aa8.96□□□□□ -0.98
TOMM40-201ENST00000252487 LCE3CQ5T5A8 94 aa8.92□□□□□ -0.98
TOMM40-201ENST00000252487 KRTAP19-4Q3LI73 84 aa8.83□□□□□ -1
TOMM40-201ENST00000252487 DSTQ03001 7570 aaKnown RBP8.81□□□□□ -1
TOMM40-201ENST00000252487 LCE3BQ5TA77 95 aa8.69□□□□□ -1.02
TOMM40-201ENST00000252487 KRTAP20-1Q3LI63 56 aa8.63□□□□□ -1.03
TOMM40-201ENST00000252487 KRTAP2-3P0C7H8 128 aa8.61□□□□□ -1.03
TOMM40-201ENST00000252487 KRTAP2-4Q9BYR9 128 aa8.61□□□□□ -1.03
TOMM40-201ENST00000252487 LOC100996750A0A140TA64 210 aa8.53□□□□□ -1.04
TOMM40-201ENST00000252487 KRTAP9-6A8MVA2 160 aa8.51□□□□□ -1.05
TOMM40-201ENST00000252487 SPRR5A0A1B0GTR4 108 aa8.4□□□□□ -1.06
TOMM40-201ENST00000252487 KRTAP2-2Q9BYT5 123 aa8.4□□□□□ -1.07
TOMM40-201ENST00000252487 KRTAP2-1Q9BYU5 128 aa8.4□□□□□ -1.07
TOMM40-201ENST00000252487 KRTAP5-5Q701N2 237 aaPredicted RBP8.19□□□□□ -1.1
TOMM40-201ENST00000252487 KRTAP5-4Q6L8H1 288 aa8.02□□□□□ -1.13
TOMM40-201ENST00000252487 KRTAP4-9Q9BYQ8 210 aa7.95□□□□□ -1.14
TOMM40-201ENST00000252487 LCE4AQ5TA78 99 aa7.93□□□□□ -1.14
TOMM40-201ENST00000252487 MT1AP04731 61 aa7.91□□□□□ -1.14
TOMM40-201ENST00000252487 MT4P47944 62 aa7.89□□□□□ -1.15
TOMM40-201ENST00000252487 KRTAP6-1Q3LI64 71 aa7.89□□□□□ -1.15
TOMM40-201ENST00000252487 LUZP6Q538Z0 58 aa7.84□□□□□ -1.15
TOMM40-201ENST00000252487 SYNE1Q8NF91 8797 aaKnown RBP7.84□□□□□ -1.15
TOMM40-201ENST00000252487 LCE1DQ5T752 114 aa7.81□□□□□ -1.16
TOMM40-201ENST00000252487 KRTAP4-6Q9BYQ5 205 aa7.78□□□□□ -1.16
TOMM40-201ENST00000252487 HMCN1Q96RW7 5635 aa7.71□□□□□ -1.18
TOMM40-201ENST00000252487 KRTAP12-4P60329 112 aa7.68□□□□□ -1.18
TOMM40-201ENST00000252487 KRTAP20-2Q3LI61 65 aa7.55□□□□□ -1.2
TOMM40-201ENST00000252487 KRTAP9-4Q9BYQ2 154 aa7.55□□□□□ -1.2
TOMM40-201ENST00000252487 NDUFAF8A1L188 74 aa7.43□□□□□ -1.22
TOMM40-201ENST00000252487 KRTAP6-2Q3LI66 62 aa7.35□□□□□ -1.23
TOMM40-201ENST00000252487 KRTAP5-3Q6L8H2 238 aa7.28□□□□□ -1.24
TOMM40-201ENST00000252487 KRTAP5-2Q701N4 177 aa7.2□□□□□ -1.26
TOMM40-201ENST00000252487 MT3P25713 68 aa7.15□□□□□ -1.26
TOMM40-201ENST00000252487 AHNAK2Q8IVF2 5795 aa7.06□□□□□ -1.28
TOMM40-201ENST00000252487 OBSCNQ5VST9 7968 aa6.8□□□□□ -1.32
TOMM40-201ENST00000252487 GPR98Q8WXG9 6306 aa6.76□□□□□ -1.33
TOMM40-201ENST00000252487 H3BS24 57 aa6.74□□□□□ -1.33
TOMM40-201ENST00000252487 KRTAP5-10Q6L8G5 202 aa6.72□□□□□ -1.33
TOMM40-201ENST00000252487 KRTAP4-11Q9BYQ6 195 aa6.64□□□□□ -1.35
TOMM40-201ENST00000252487 LCE3DQ9BYE3 92 aa6.61□□□□□ -1.35
TOMM40-201ENST00000252487 KRTAP5-8O75690 187 aa6.42□□□□□ -1.38
TOMM40-201ENST00000252487 LCE3EQ5T5B0 92 aa6.36□□□□□ -1.39
TOMM40-201ENST00000252487 KRTAP5-1Q6L8H4 278 aa6.31□□□□□ -1.4
TOMM40-201ENST00000252487 LCE1EQ5T753 118 aa6.28□□□□□ -1.4
TOMM40-201ENST00000252487 A0A0A0MQY5 61 aa6.28□□□□□ -1.4
TOMM40-201ENST00000252487 KRTAP5-7Q6L8G8 165 aa6.27□□□□□ -1.41
TOMM40-201ENST00000252487 MUC5ACP98088 5654 aa6.14□□□□□ -1.43
TOMM40-201ENST00000252487 LCE1BQ5T7P3 118 aa6.02□□□□□ -1.45
TOMM40-201ENST00000252487 INE1O15225 51 aa5.98□□□□□ -1.45
TOMM40-201ENST00000252487 KRTAP4-2Q9BYR5 136 aa5.96□□□□□ -1.46
TOMM40-201ENST00000252487 LCE1CQ5T751 118 aa5.87□□□□□ -1.47
TOMM40-201ENST00000252487 KRTAP9-9Q9BYP9 154 aa5.85□□□□□ -1.47
TOMM40-201ENST00000252487 MUC5BQ9HC84 5762 aaPredicted RBP5.68□□□□□ -1.5
TOMM40-201ENST00000252487 AHNAKQ09666 5890 aaKnown RBP5.48□□□□□ -1.53
TOMM40-201ENST00000252487 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.44□□□□□ -1.54
TOMM40-201ENST00000252487 PRM1P04553 51 aa5.4□□□□□ -1.54
TOMM40-201ENST00000252487 KRTAP5-11Q6L8G4 156 aa5.23□□□□□ -1.57
TOMM40-201ENST00000252487 KRTAP21-2Q3LI59 83 aa5.16□□□□□ -1.58
TOMM40-201ENST00000252487 KRTAP4-12Q9BQ66 201 aa5.16□□□□□ -1.58
TOMM40-201ENST00000252487 LCE1FQ5T754 118 aa4.78□□□□□ -1.64
TOMM40-201ENST00000252487 KRTAP4-4Q9BYR3 166 aa4.71□□□□□ -1.66
TOMM40-201ENST00000252487 PHGR1C9JFL3 82 aa4.51□□□□□ -1.69
TOMM40-201ENST00000252487 MUC19Q7Z5P9 8384 aa4.12□□□□□ -1.75
TOMM40-201ENST00000252487 KRTAP21-1Q3LI58 79 aa3.16□□□□□ -1.9
TOMM40-201ENST00000252487 MUC16Q8WXI7 14507 aa2.9□□□□□ -1.95
Retrieved 77 of 20,778 RNA–protein pairs in 223.2 ms