RNA–Protein interactions for RNA: ENST00000249064.8

CCDC117-201, Transcript of coiled-coil domain containing 117, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC117, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-201ENST00000249064 KRTAP4-3Q9BYR4 195 aa4.41□□□□□ -1.7
CCDC117-201ENST00000249064 LOC100996750A0A140TA64 210 aa4.4□□□□□ -1.71
CCDC117-201ENST00000249064 MT1LQ93083 61 aa4.4□□□□□ -1.71
CCDC117-201ENST00000249064 MT1EP04732 61 aa4.37□□□□□ -1.71
CCDC117-201ENST00000249064 MUC12Q9UKN1 5478 aa4.36□□□□□ -1.71
CCDC117-201ENST00000249064 SPRR2FQ96RM1 72 aa4.35□□□□□ -1.71
CCDC117-201ENST00000249064 SSPOA2VEC9 5147 aa4.32□□□□□ -1.72
CCDC117-201ENST00000249064 KRTAP2-3P0C7H8 128 aa4.31□□□□□ -1.72
CCDC117-201ENST00000249064 KRTAP2-4Q9BYR9 128 aa4.31□□□□□ -1.72
CCDC117-201ENST00000249064 KRTAP2-1Q9BYU5 128 aa4.31□□□□□ -1.72
CCDC117-201ENST00000249064 LCE2DQ5TA82 110 aaPredicted RBP4.28□□□□□ -1.72
CCDC117-201ENST00000249064 KRTAP4-9Q9BYQ8 210 aa4.25□□□□□ -1.73
CCDC117-201ENST00000249064 SYNE2Q8WXH0 6885 aaKnown RBP4.2□□□□□ -1.74
CCDC117-201ENST00000249064 KRTAP9-2Q9BYQ4 174 aa4.19□□□□□ -1.74
CCDC117-201ENST00000249064 KRTAP19-6Q3LI70 58 aa4.18□□□□□ -1.74
CCDC117-201ENST00000249064 KRTAP19-3Q7Z4W3 81 aa4.15□□□□□ -1.75
CCDC117-201ENST00000249064 PRM1P04553 51 aa4.14□□□□□ -1.75
CCDC117-201ENST00000249064 MT1MQ8N339 61 aa4.13□□□□□ -1.75
CCDC117-201ENST00000249064 LCE3DQ9BYE3 92 aa4.12□□□□□ -1.75
CCDC117-201ENST00000249064 KRTAP19-4Q3LI73 84 aa4.06□□□□□ -1.76
CCDC117-201ENST00000249064 LCE3EQ5T5B0 92 aa4.05□□□□□ -1.76
CCDC117-201ENST00000249064 KRTAP9-7A8MTY7 169 aa3.98□□□□□ -1.77
CCDC117-201ENST00000249064 MACF1Q9UPN3 7388 aaKnown RBP3.98□□□□□ -1.77
CCDC117-201ENST00000249064 MUC19Q7Z5P9 8384 aa3.93□□□□□ -1.78
CCDC117-201ENST00000249064 SPRR2EP22531 72 aa3.9□□□□□ -1.78
CCDC117-201ENST00000249064 SPRR2BP35325 72 aa3.9□□□□□ -1.78
CCDC117-201ENST00000249064 SPRR2AP35326 72 aa3.9□□□□□ -1.78
CCDC117-201ENST00000249064 KRTAP9-6A0A140TA67 174 aa3.85□□□□□ -1.79
CCDC117-201ENST00000249064 LCE5AQ5TCM9 118 aa3.83□□□□□ -1.8
CCDC117-201ENST00000249064 MDN1Q9NU22 5596 aa3.82□□□□□ -1.8
CCDC117-201ENST00000249064 KRTAP6-1Q3LI64 71 aa3.81□□□□□ -1.8
CCDC117-201ENST00000249064 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.72□□□□□ -1.81
CCDC117-201ENST00000249064 SPRR2DP22532 72 aa3.71□□□□□ -1.82
CCDC117-201ENST00000249064 KRTAP6-2Q3LI66 62 aa3.71□□□□□ -1.82
CCDC117-201ENST00000249064 MT1AP04731 61 aa3.67□□□□□ -1.82
CCDC117-201ENST00000249064 LCE1AQ5T7P2 110 aa3.66□□□□□ -1.82
CCDC117-201ENST00000249064 KRTAP5-9P26371 169 aa3.65□□□□□ -1.83
CCDC117-201ENST00000249064 KRTAP6-3Q3LI67 103 aa3.61□□□□□ -1.83
CCDC117-201ENST00000249064 LCE1EQ5T753 118 aa3.48□□□□□ -1.85
CCDC117-201ENST00000249064 KRTAP5-5Q701N2 237 aaPredicted RBP3.48□□□□□ -1.85
CCDC117-201ENST00000249064 KRTAP2-2Q9BYT5 123 aa3.46□□□□□ -1.85
CCDC117-201ENST00000249064 MT4P47944 62 aa3.46□□□□□ -1.86
CCDC117-201ENST00000249064 MT3P25713 68 aa3.45□□□□□ -1.86
CCDC117-201ENST00000249064 KRTAP9-4Q9BYQ2 154 aa3.43□□□□□ -1.86
CCDC117-201ENST00000249064 NEBP20929 6669 aa3.37□□□□□ -1.87
CCDC117-201ENST00000249064 LCE1DQ5T752 114 aa3.26□□□□□ -1.89
CCDC117-201ENST00000249064 LCE1BQ5T7P3 118 aa3.26□□□□□ -1.89
CCDC117-201ENST00000249064 KRTAP4-6Q9BYQ5 205 aa3.2□□□□□ -1.9
CCDC117-201ENST00000249064 KRTAP4-11Q9BYQ6 195 aa3.17□□□□□ -1.9
CCDC117-201ENST00000249064 KRTAP20-1Q3LI63 56 aa3.14□□□□□ -1.91
CCDC117-201ENST00000249064 KRTAP5-4Q6L8H1 288 aa3.03□□□□□ -1.92
CCDC117-201ENST00000249064 LCE4AQ5TA78 99 aa3.02□□□□□ -1.93
CCDC117-201ENST00000249064 KRTAP20-2Q3LI61 65 aa2.95□□□□□ -1.94
CCDC117-201ENST00000249064 HMCN1Q96RW7 5635 aa2.92□□□□□ -1.94
CCDC117-201ENST00000249064 MUC5ACP98088 5654 aa2.86□□□□□ -1.95
CCDC117-201ENST00000249064 KRTAP5-3Q6L8H2 238 aa2.74□□□□□ -1.97
CCDC117-201ENST00000249064 KRTAP5-2Q701N4 177 aa2.74□□□□□ -1.97
CCDC117-201ENST00000249064 LCE1FQ5T754 118 aa2.73□□□□□ -1.97
CCDC117-201ENST00000249064 KRTAP4-12Q9BQ66 201 aa2.71□□□□□ -1.98
CCDC117-201ENST00000249064 KRTAP4-4Q9BYR3 166 aa2.7□□□□□ -1.98
CCDC117-201ENST00000249064 KRTAP9-9Q9BYP9 154 aa2.61□□□□□ -1.99
CCDC117-201ENST00000249064 AHNAK2Q8IVF2 5795 aa2.55□□□□□ -2
CCDC117-201ENST00000249064 KRTAP5-10Q6L8G5 202 aa2.53□□□□□ -2
CCDC117-201ENST00000249064 KRTAP4-2Q9BYR5 136 aa2.47□□□□□ -2.01
CCDC117-201ENST00000249064 KRTAP5-1Q6L8H4 278 aa2.45□□□□□ -2.02
CCDC117-201ENST00000249064 KRTAP5-8O75690 187 aa2.39□□□□□ -2.03
CCDC117-201ENST00000249064 LCE1CQ5T751 118 aa2.37□□□□□ -2.03
CCDC117-201ENST00000249064 GPR98Q8WXG9 6306 aa2.36□□□□□ -2.03
CCDC117-201ENST00000249064 MUC5BQ9HC84 5762 aaPredicted RBP2.35□□□□□ -2.03
CCDC117-201ENST00000249064 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
CCDC117-201ENST00000249064 KRTAP5-7Q6L8G8 165 aa2.25□□□□□ -2.05
CCDC117-201ENST00000249064 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.15□□□□□ -2.06
CCDC117-201ENST00000249064 KRTAP21-1Q3LI58 79 aa2.12□□□□□ -2.07
CCDC117-201ENST00000249064 KRTAP5-11Q6L8G4 156 aa2.02□□□□□ -2.09
CCDC117-201ENST00000249064 AHNAKQ09666 5890 aaKnown RBP1.92□□□□□ -2.1
CCDC117-201ENST00000249064 PHGR1C9JFL3 82 aa1.75□□□□□ -2.13
CCDC117-201ENST00000249064 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 9.2 ms