RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 LCE2AQ5TA79 106 aaPredicted RBP5.74□□□□□ -1.49
SGPP1-201ENST00000247225 MT1LQ93083 61 aa5.7□□□□□ -1.5
SGPP1-201ENST00000247225 MT1GP13640 62 aa5.66□□□□□ -1.5
SGPP1-201ENST00000247225 MT1EP04732 61 aa5.65□□□□□ -1.5
SGPP1-201ENST00000247225 KRTAP2-3P0C7H8 128 aa5.62□□□□□ -1.51
SGPP1-201ENST00000247225 KRTAP2-4Q9BYR9 128 aa5.62□□□□□ -1.51
SGPP1-201ENST00000247225 KRTAP2-1Q9BYU5 128 aa5.62□□□□□ -1.51
SGPP1-201ENST00000247225 SYNE2Q8WXH0 6885 aaKnown RBP5.48□□□□□ -1.53
SGPP1-201ENST00000247225 KRTAP12-4P60329 112 aa5.44□□□□□ -1.54
SGPP1-201ENST00000247225 LCE3BQ5TA77 95 aa5.37□□□□□ -1.55
SGPP1-201ENST00000247225 KRTAP4-9Q9BYQ8 210 aa5.36□□□□□ -1.55
SGPP1-201ENST00000247225 LCE2DQ5TA82 110 aaPredicted RBP5.35□□□□□ -1.55
SGPP1-201ENST00000247225 MT1MQ8N339 61 aa5.3□□□□□ -1.56
SGPP1-201ENST00000247225 SPRR2FQ96RM1 72 aa5.3□□□□□ -1.56
SGPP1-201ENST00000247225 MACF1Q9UPN3 7388 aaKnown RBP5.27□□□□□ -1.57
SGPP1-201ENST00000247225 KRTAP19-3Q7Z4W3 81 aa5.25□□□□□ -1.57
SGPP1-201ENST00000247225 KRTAP19-6Q3LI70 58 aa5.2□□□□□ -1.58
SGPP1-201ENST00000247225 MDN1Q9NU22 5596 aa5.17□□□□□ -1.58
SGPP1-201ENST00000247225 KRTAP19-4Q3LI73 84 aa5.12□□□□□ -1.59
SGPP1-201ENST00000247225 KRTAP6-1Q3LI64 71 aa4.97□□□□□ -1.61
SGPP1-201ENST00000247225 LCE5AQ5TCM9 118 aa4.94□□□□□ -1.62
SGPP1-201ENST00000247225 KRTAP9-7A8MTY7 169 aa4.92□□□□□ -1.62
SGPP1-201ENST00000247225 LCE3DQ9BYE3 92 aa4.91□□□□□ -1.62
SGPP1-201ENST00000247225 KRTAP9-2Q9BYQ4 174 aa4.86□□□□□ -1.63
SGPP1-201ENST00000247225 PRM1P04553 51 aa4.84□□□□□ -1.63
SGPP1-201ENST00000247225 LCE3EQ5T5B0 92 aa4.81□□□□□ -1.64
SGPP1-201ENST00000247225 SPRR2EP22531 72 aa4.69□□□□□ -1.66
SGPP1-201ENST00000247225 SPRR2BP35325 72 aa4.69□□□□□ -1.66
SGPP1-201ENST00000247225 SPRR2AP35326 72 aa4.69□□□□□ -1.66
SGPP1-201ENST00000247225 MT1AP04731 61 aa4.68□□□□□ -1.66
SGPP1-201ENST00000247225 KRTAP5-5Q701N2 237 aaPredicted RBP4.63□□□□□ -1.67
SGPP1-201ENST00000247225 LCE1AQ5T7P2 110 aa4.61□□□□□ -1.67
SGPP1-201ENST00000247225 KRTAP6-2Q3LI66 62 aa4.57□□□□□ -1.68
SGPP1-201ENST00000247225 SPRR2DP22532 72 aa4.44□□□□□ -1.7
SGPP1-201ENST00000247225 KRTAP9-4Q9BYQ2 154 aa4.41□□□□□ -1.7
SGPP1-201ENST00000247225 KRTAP5-9P26371 169 aa4.39□□□□□ -1.71
SGPP1-201ENST00000247225 KRTAP9-6A0A140TA67 174 aa4.35□□□□□ -1.71
SGPP1-201ENST00000247225 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.34□□□□□ -1.71
SGPP1-201ENST00000247225 MT3P25713 68 aa4.29□□□□□ -1.72
SGPP1-201ENST00000247225 MT4P47944 62 aa4.18□□□□□ -1.74
SGPP1-201ENST00000247225 KRTAP6-3Q3LI67 103 aa4.18□□□□□ -1.74
SGPP1-201ENST00000247225 KRTAP2-2Q9BYT5 123 aa4.12□□□□□ -1.75
SGPP1-201ENST00000247225 KRTAP4-6Q9BYQ5 205 aa4.05□□□□□ -1.76
SGPP1-201ENST00000247225 NEBP20929 6669 aa3.98□□□□□ -1.77
SGPP1-201ENST00000247225 LCE1DQ5T752 114 aa3.94□□□□□ -1.78
SGPP1-201ENST00000247225 MUC19Q7Z5P9 8384 aa3.89□□□□□ -1.79
SGPP1-201ENST00000247225 LCE1BQ5T7P3 118 aa3.87□□□□□ -1.79
SGPP1-201ENST00000247225 MUC5ACP98088 5654 aa3.81□□□□□ -1.8
SGPP1-201ENST00000247225 HMCN1Q96RW7 5635 aa3.81□□□□□ -1.8
SGPP1-201ENST00000247225 KRTAP4-11Q9BYQ6 195 aa3.76□□□□□ -1.81
SGPP1-201ENST00000247225 KRTAP5-4Q6L8H1 288 aa3.72□□□□□ -1.81
SGPP1-201ENST00000247225 KRTAP20-2Q3LI61 65 aa3.71□□□□□ -1.82
SGPP1-201ENST00000247225 LCE1EQ5T753 118 aa3.7□□□□□ -1.82
SGPP1-201ENST00000247225 KRTAP20-1Q3LI63 56 aa3.5□□□□□ -1.85
SGPP1-201ENST00000247225 LCE4AQ5TA78 99 aa3.47□□□□□ -1.85
SGPP1-201ENST00000247225 KRTAP5-2Q701N4 177 aa3.44□□□□□ -1.86
SGPP1-201ENST00000247225 KRTAP5-10Q6L8G5 202 aa3.38□□□□□ -1.87
SGPP1-201ENST00000247225 KRTAP5-3Q6L8H2 238 aa3.38□□□□□ -1.87
SGPP1-201ENST00000247225 KRTAP4-4Q9BYR3 166 aa3.32□□□□□ -1.88
SGPP1-201ENST00000247225 KRTAP4-2Q9BYR5 136 aa3.19□□□□□ -1.9
SGPP1-201ENST00000247225 MUC5BQ9HC84 5762 aaPredicted RBP3.14□□□□□ -1.91
SGPP1-201ENST00000247225 KRTAP5-1Q6L8H4 278 aa3.11□□□□□ -1.91
SGPP1-201ENST00000247225 LCE1FQ5T754 118 aa3.09□□□□□ -1.92
SGPP1-201ENST00000247225 AHNAK2Q8IVF2 5795 aa3.09□□□□□ -1.92
SGPP1-201ENST00000247225 LCE1CQ5T751 118 aa3.05□□□□□ -1.92
SGPP1-201ENST00000247225 KRTAP4-12Q9BQ66 201 aa3.05□□□□□ -1.92
SGPP1-201ENST00000247225 KRTAP21-2Q3LI59 83 aa3.03□□□□□ -1.92
SGPP1-201ENST00000247225 KRTAP5-8O75690 187 aa2.9□□□□□ -1.94
SGPP1-201ENST00000247225 KRTAP5-7Q6L8G8 165 aa2.75□□□□□ -1.97
SGPP1-201ENST00000247225 KRTAP21-1Q3LI58 79 aa2.74□□□□□ -1.97
SGPP1-201ENST00000247225 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.7□□□□□ -1.98
SGPP1-201ENST00000247225 GPR98Q8WXG9 6306 aa2.63□□□□□ -1.99
SGPP1-201ENST00000247225 KRTAP5-11Q6L8G4 156 aa2.55□□□□□ -2
SGPP1-201ENST00000247225 KRTAP9-9Q9BYP9 154 aa2.45□□□□□ -2.02
SGPP1-201ENST00000247225 AHNAKQ09666 5890 aaKnown RBP2.3□□□□□ -2.04
SGPP1-201ENST00000247225 PHGR1C9JFL3 82 aa2.27□□□□□ -2.05
SGPP1-201ENST00000247225 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 90.4 ms