RNA–Protein interactions for RNA: ENST00000244815.9

LRRFIP1-201, Transcript of LRR binding FLII interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRRFIP1, Length 4,370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-201ENST00000244815 RNF213Q63HN8 5207 aa5.07□□□□□ -1.6
LRRFIP1-201ENST00000244815 SPRR2DP22532 72 aa5.03□□□□□ -1.6
LRRFIP1-201ENST00000244815 MUC2Q02817 5179 aa5.02□□□□□ -1.61
LRRFIP1-201ENST00000244815 MT1MQ8N339 61 aa5□□□□□ -1.61
LRRFIP1-201ENST00000244815 OBSCNQ5VST9 7968 aa5□□□□□ -1.61
LRRFIP1-201ENST00000244815 KRTAP19-7Q3SYF9 63 aa5□□□□□ -1.61
LRRFIP1-201ENST00000244815 LOC100996750A0A140TA64 210 aa4.98□□□□□ -1.61
LRRFIP1-201ENST00000244815 KRTAP4-3Q9BYR4 195 aa4.97□□□□□ -1.61
LRRFIP1-201ENST00000244815 KRTAP19-6Q3LI70 58 aa4.92□□□□□ -1.62
LRRFIP1-201ENST00000244815 LCE2AQ5TA79 106 aaPredicted RBP4.86□□□□□ -1.63
LRRFIP1-201ENST00000244815 KRTAP2-3P0C7H8 128 aa4.82□□□□□ -1.64
LRRFIP1-201ENST00000244815 KRTAP2-4Q9BYR9 128 aa4.82□□□□□ -1.64
LRRFIP1-201ENST00000244815 KRTAP2-1Q9BYU5 128 aa4.82□□□□□ -1.64
LRRFIP1-201ENST00000244815 KRTAP9-6A8MVA2 160 aa4.77□□□□□ -1.65
LRRFIP1-201ENST00000244815 PRM1P04553 51 aa4.76□□□□□ -1.65
LRRFIP1-201ENST00000244815 MT3P25713 68 aa4.73□□□□□ -1.65
LRRFIP1-201ENST00000244815 FCGBPQ9Y6R7 5405 aaPredicted RBP4.73□□□□□ -1.65
LRRFIP1-201ENST00000244815 KRTAP9-2Q9BYQ4 174 aa4.68□□□□□ -1.66
LRRFIP1-201ENST00000244815 KRTAP4-9Q9BYQ8 210 aa4.67□□□□□ -1.66
LRRFIP1-201ENST00000244815 DSTQ03001 7570 aaKnown RBP4.63□□□□□ -1.67
LRRFIP1-201ENST00000244815 MT1AP04731 61 aa4.62□□□□□ -1.67
LRRFIP1-201ENST00000244815 LCE2DQ5TA82 110 aaPredicted RBP4.62□□□□□ -1.67
LRRFIP1-201ENST00000244815 SYNE2Q8WXH0 6885 aaKnown RBP4.57□□□□□ -1.68
LRRFIP1-201ENST00000244815 USH2AO75445 5202 aa4.54□□□□□ -1.68
LRRFIP1-201ENST00000244815 MT4P47944 62 aa4.52□□□□□ -1.69
LRRFIP1-201ENST00000244815 KRTAP6-1Q3LI64 71 aa4.44□□□□□ -1.7
LRRFIP1-201ENST00000244815 LCE5AQ5TCM9 118 aa4.42□□□□□ -1.7
LRRFIP1-201ENST00000244815 KMT2DO14686 5537 aa4.41□□□□□ -1.7
LRRFIP1-201ENST00000244815 LCE1DQ5T752 114 aa4.4□□□□□ -1.7
LRRFIP1-201ENST00000244815 LCE1BQ5T7P3 118 aa4.4□□□□□ -1.71
LRRFIP1-201ENST00000244815 KRTAP9-6A0A140TA67 174 aa4.37□□□□□ -1.71
LRRFIP1-201ENST00000244815 LCE1AQ5T7P2 110 aa4.3□□□□□ -1.72
LRRFIP1-201ENST00000244815 KRTAP6-2Q3LI66 62 aa4.27□□□□□ -1.73
LRRFIP1-201ENST00000244815 KRTAP9-4Q9BYQ2 154 aa4.23□□□□□ -1.73
LRRFIP1-201ENST00000244815 KRTAP9-7A8MTY7 169 aa4.22□□□□□ -1.73
LRRFIP1-201ENST00000244815 MUC12Q9UKN1 5478 aa4.18□□□□□ -1.74
LRRFIP1-201ENST00000244815 MACF1Q9UPN3 7388 aaKnown RBP4.16□□□□□ -1.74
LRRFIP1-201ENST00000244815 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.09□□□□□ -1.75
LRRFIP1-201ENST00000244815 KRTAP6-3Q3LI67 103 aa4.07□□□□□ -1.76
LRRFIP1-201ENST00000244815 SSPOA2VEC9 5147 aa4.04□□□□□ -1.76
LRRFIP1-201ENST00000244815 MUC19Q7Z5P9 8384 aa3.99□□□□□ -1.77
LRRFIP1-201ENST00000244815 LCE4AQ5TA78 99 aa3.91□□□□□ -1.78
LRRFIP1-201ENST00000244815 MDN1Q9NU22 5596 aa3.86□□□□□ -1.79
LRRFIP1-201ENST00000244815 KRTAP20-1Q3LI63 56 aa3.86□□□□□ -1.79
LRRFIP1-201ENST00000244815 KRTAP2-2Q9BYT5 123 aa3.85□□□□□ -1.79
LRRFIP1-201ENST00000244815 KRTAP5-9P26371 169 aa3.74□□□□□ -1.81
LRRFIP1-201ENST00000244815 KRTAP4-6Q9BYQ5 205 aa3.6□□□□□ -1.83
LRRFIP1-201ENST00000244815 NEBP20929 6669 aa3.55□□□□□ -1.84
LRRFIP1-201ENST00000244815 KRTAP5-5Q701N2 237 aaPredicted RBP3.54□□□□□ -1.84
LRRFIP1-201ENST00000244815 KRTAP4-11Q9BYQ6 195 aa3.54□□□□□ -1.84
LRRFIP1-201ENST00000244815 LCE1CQ5T751 118 aa3.54□□□□□ -1.84
LRRFIP1-201ENST00000244815 LCE1EQ5T753 118 aa3.54□□□□□ -1.84
LRRFIP1-201ENST00000244815 LCE1FQ5T754 118 aa3.54□□□□□ -1.84
LRRFIP1-201ENST00000244815 KRTAP20-2Q3LI61 65 aa3.49□□□□□ -1.85
LRRFIP1-201ENST00000244815 KRTAP9-9Q9BYP9 154 aa3.25□□□□□ -1.89
LRRFIP1-201ENST00000244815 MUC5ACP98088 5654 aa3.24□□□□□ -1.89
LRRFIP1-201ENST00000244815 GPR98Q8WXG9 6306 aa3.23□□□□□ -1.89
LRRFIP1-201ENST00000244815 KRTAP4-4Q9BYR3 166 aa3.19□□□□□ -1.9
LRRFIP1-201ENST00000244815 KRTAP5-4Q6L8H1 288 aa3.14□□□□□ -1.91
LRRFIP1-201ENST00000244815 HMCN1Q96RW7 5635 aa3.14□□□□□ -1.91
LRRFIP1-201ENST00000244815 KRTAP4-12Q9BQ66 201 aa3.07□□□□□ -1.92
LRRFIP1-201ENST00000244815 KRTAP4-2Q9BYR5 136 aa3.07□□□□□ -1.92
LRRFIP1-201ENST00000244815 AHNAK2Q8IVF2 5795 aa2.87□□□□□ -1.95
LRRFIP1-201ENST00000244815 KRTAP5-10Q6L8G5 202 aa2.79□□□□□ -1.96
LRRFIP1-201ENST00000244815 KRTAP5-3Q6L8H2 238 aa2.79□□□□□ -1.96
LRRFIP1-201ENST00000244815 KRTAP5-2Q701N4 177 aa2.72□□□□□ -1.97
LRRFIP1-201ENST00000244815 KRTAP5-8O75690 187 aa2.58□□□□□ -2
LRRFIP1-201ENST00000244815 MUC5BQ9HC84 5762 aaPredicted RBP2.41□□□□□ -2.02
LRRFIP1-201ENST00000244815 KRTAP5-1Q6L8H4 278 aa2.4□□□□□ -2.02
LRRFIP1-201ENST00000244815 KRTAP21-2Q3LI59 83 aa2.38□□□□□ -2.03
LRRFIP1-201ENST00000244815 AHNAKQ09666 5890 aaKnown RBP2.37□□□□□ -2.03
LRRFIP1-201ENST00000244815 KRTAP5-11Q6L8G4 156 aa2.37□□□□□ -2.03
LRRFIP1-201ENST00000244815 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.19□□□□□ -2.06
LRRFIP1-201ENST00000244815 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
LRRFIP1-201ENST00000244815 PHGR1C9JFL3 82 aa2.06□□□□□ -2.08
LRRFIP1-201ENST00000244815 KRTAP5-7Q6L8G8 165 aa2.05□□□□□ -2.08
LRRFIP1-201ENST00000244815 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 13.1 ms