RNA–Protein interactions for RNA: ENST00000242719.3

RNF11-201, Transcript of ring finger protein 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF11, Length 3,084 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11-201ENST00000242719 MUC12Q9UKN1 5478 aa5.26□□□□□ -1.57
RNF11-201ENST00000242719 DSTQ03001 7570 aaKnown RBP5.25□□□□□ -1.57
RNF11-201ENST00000242719 MT1LQ93083 61 aa5.22□□□□□ -1.57
RNF11-201ENST00000242719 LOC100996750A0A140TA64 210 aa5.2□□□□□ -1.58
RNF11-201ENST00000242719 KRTAP4-3Q9BYR4 195 aa5.2□□□□□ -1.58
RNF11-201ENST00000242719 MT1EP04732 61 aa5.18□□□□□ -1.58
RNF11-201ENST00000242719 KRTAP9-2Q9BYQ4 174 aa5.17□□□□□ -1.58
RNF11-201ENST00000242719 KRTAP19-6Q3LI70 58 aa5.15□□□□□ -1.58
RNF11-201ENST00000242719 LCE2DQ5TA82 110 aaPredicted RBP5.13□□□□□ -1.59
RNF11-201ENST00000242719 MT1GP13640 62 aa5.1□□□□□ -1.59
RNF11-201ENST00000242719 SYNE1Q8NF91 8797 aaKnown RBP5.04□□□□□ -1.6
RNF11-201ENST00000242719 MDN1Q9NU22 5596 aa5.01□□□□□ -1.61
RNF11-201ENST00000242719 KRTAP12-4P60329 112 aa4.95□□□□□ -1.62
RNF11-201ENST00000242719 OBSCNQ5VST9 7968 aa4.91□□□□□ -1.62
RNF11-201ENST00000242719 MT1MQ8N339 61 aa4.85□□□□□ -1.63
RNF11-201ENST00000242719 KRTAP19-4Q3LI73 84 aa4.83□□□□□ -1.64
RNF11-201ENST00000242719 LCE3BQ5TA77 95 aa4.82□□□□□ -1.64
RNF11-201ENST00000242719 KRTAP4-9Q9BYQ8 210 aa4.82□□□□□ -1.64
RNF11-201ENST00000242719 KRTAP19-3Q7Z4W3 81 aa4.8□□□□□ -1.64
RNF11-201ENST00000242719 SPRR2FQ96RM1 72 aa4.8□□□□□ -1.64
RNF11-201ENST00000242719 KRTAP9-6A0A140TA67 174 aa4.62□□□□□ -1.67
RNF11-201ENST00000242719 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.58□□□□□ -1.68
RNF11-201ENST00000242719 LCE5AQ5TCM9 118 aa4.57□□□□□ -1.68
RNF11-201ENST00000242719 KRTAP9-7A8MTY7 169 aa4.52□□□□□ -1.69
RNF11-201ENST00000242719 KRTAP6-1Q3LI64 71 aa4.52□□□□□ -1.69
RNF11-201ENST00000242719 LCE1AQ5T7P2 110 aa4.5□□□□□ -1.69
RNF11-201ENST00000242719 KRTAP5-9P26371 169 aa4.48□□□□□ -1.69
RNF11-201ENST00000242719 SPRR2EP22531 72 aa4.46□□□□□ -1.7
RNF11-201ENST00000242719 SPRR2BP35325 72 aa4.46□□□□□ -1.7
RNF11-201ENST00000242719 SPRR2AP35326 72 aa4.46□□□□□ -1.7
RNF11-201ENST00000242719 PRM1P04553 51 aa4.45□□□□□ -1.7
RNF11-201ENST00000242719 LCE3DQ9BYE3 92 aa4.43□□□□□ -1.7
RNF11-201ENST00000242719 KRTAP5-5Q701N2 237 aaPredicted RBP4.39□□□□□ -1.71
RNF11-201ENST00000242719 LCE3EQ5T5B0 92 aa4.37□□□□□ -1.71
RNF11-201ENST00000242719 MT1AP04731 61 aa4.33□□□□□ -1.72
RNF11-201ENST00000242719 NEBP20929 6669 aa4.33□□□□□ -1.72
RNF11-201ENST00000242719 KRTAP6-3Q3LI67 103 aa4.32□□□□□ -1.72
RNF11-201ENST00000242719 SPRR2DP22532 72 aa4.26□□□□□ -1.73
RNF11-201ENST00000242719 KRTAP6-2Q3LI66 62 aa4.18□□□□□ -1.74
RNF11-201ENST00000242719 KRTAP9-4Q9BYQ2 154 aa4.04□□□□□ -1.76
RNF11-201ENST00000242719 MT4P47944 62 aa3.9□□□□□ -1.79
RNF11-201ENST00000242719 MT3P25713 68 aa3.89□□□□□ -1.79
RNF11-201ENST00000242719 KRTAP2-2Q9BYT5 123 aa3.89□□□□□ -1.79
RNF11-201ENST00000242719 KRTAP4-6Q9BYQ5 205 aa3.88□□□□□ -1.79
RNF11-201ENST00000242719 HMCN1Q96RW7 5635 aa3.87□□□□□ -1.79
RNF11-201ENST00000242719 KRTAP5-4Q6L8H1 288 aa3.75□□□□□ -1.81
RNF11-201ENST00000242719 KRTAP20-1Q3LI63 56 aa3.72□□□□□ -1.81
RNF11-201ENST00000242719 LCE1DQ5T752 114 aa3.7□□□□□ -1.82
RNF11-201ENST00000242719 LCE1EQ5T753 118 aa3.65□□□□□ -1.82
RNF11-201ENST00000242719 KRTAP20-2Q3LI61 65 aa3.61□□□□□ -1.83
RNF11-201ENST00000242719 MUC19Q7Z5P9 8384 aa3.55□□□□□ -1.84
RNF11-201ENST00000242719 LCE4AQ5TA78 99 aa3.55□□□□□ -1.84
RNF11-201ENST00000242719 MUC5ACP98088 5654 aa3.47□□□□□ -1.85
RNF11-201ENST00000242719 KRTAP5-3Q6L8H2 238 aa3.45□□□□□ -1.86
RNF11-201ENST00000242719 KRTAP5-2Q701N4 177 aa3.41□□□□□ -1.86
RNF11-201ENST00000242719 LCE1BQ5T7P3 118 aa3.4□□□□□ -1.86
RNF11-201ENST00000242719 KRTAP4-11Q9BYQ6 195 aa3.4□□□□□ -1.87
RNF11-201ENST00000242719 AHNAK2Q8IVF2 5795 aa3.24□□□□□ -1.89
RNF11-201ENST00000242719 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
RNF11-201ENST00000242719 KRTAP5-10Q6L8G5 202 aa3.16□□□□□ -1.9
RNF11-201ENST00000242719 KRTAP5-1Q6L8H4 278 aa3.05□□□□□ -1.92
RNF11-201ENST00000242719 MUC5BQ9HC84 5762 aaPredicted RBP3.01□□□□□ -1.93
RNF11-201ENST00000242719 KRTAP5-8O75690 187 aa3□□□□□ -1.93
RNF11-201ENST00000242719 GPR98Q8WXG9 6306 aa2.96□□□□□ -1.93
RNF11-201ENST00000242719 KRTAP4-2Q9BYR5 136 aa2.96□□□□□ -1.94
RNF11-201ENST00000242719 KRTAP4-4Q9BYR3 166 aa2.92□□□□□ -1.94
RNF11-201ENST00000242719 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
RNF11-201ENST00000242719 KRTAP21-2Q3LI59 83 aa2.81□□□□□ -1.96
RNF11-201ENST00000242719 KRTAP5-7Q6L8G8 165 aa2.71□□□□□ -1.98
RNF11-201ENST00000242719 KRTAP21-1Q3LI58 79 aa2.7□□□□□ -1.98
RNF11-201ENST00000242719 KRTAP4-12Q9BQ66 201 aa2.7□□□□□ -1.98
RNF11-201ENST00000242719 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.62□□□□□ -1.99
RNF11-201ENST00000242719 KRTAP9-9Q9BYP9 154 aa2.59□□□□□ -2
RNF11-201ENST00000242719 KRTAP5-11Q6L8G4 156 aa2.45□□□□□ -2.02
RNF11-201ENST00000242719 AHNAKQ09666 5890 aaKnown RBP2.39□□□□□ -2.03
RNF11-201ENST00000242719 PHGR1C9JFL3 82 aa2.17□□□□□ -2.06
RNF11-201ENST00000242719 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 70.6 ms