RNA–Protein interactions for RNA: ENST00000237596.6

PKD2-201, Transcript of polycystin 2, transient receptor potential cation channel, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKD2, Length 5,056 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD2-201ENST00000237596 KRTAP9-2Q9BYQ4 174 aa6.05□□□□□ -1.44
PKD2-201ENST00000237596 LCE2DQ5TA82 110 aaPredicted RBP6.03□□□□□ -1.44
PKD2-201ENST00000237596 MT1MQ8N339 61 aa5.96□□□□□ -1.46
PKD2-201ENST00000237596 RNF213Q63HN8 5207 aa5.95□□□□□ -1.46
PKD2-201ENST00000237596 FAT4Q6V0I7 4981 aa5.92□□□□□ -1.46
PKD2-201ENST00000237596 LCE2AQ5TA79 106 aaPredicted RBP5.9□□□□□ -1.46
PKD2-201ENST00000237596 MT3P25713 68 aa5.83□□□□□ -1.48
PKD2-201ENST00000237596 MT4P47944 62 aa5.83□□□□□ -1.48
PKD2-201ENST00000237596 MUC2Q02817 5179 aa5.79□□□□□ -1.48
PKD2-201ENST00000237596 HMCN2Q8NDA2 5059 aa5.79□□□□□ -1.48
PKD2-201ENST00000237596 KRTAP4-3Q9BYR4 195 aa5.76□□□□□ -1.49
PKD2-201ENST00000237596 LOC100996750A0A140TA64 210 aa5.75□□□□□ -1.49
PKD2-201ENST00000237596 KRTAP9-6A0A140TA67 174 aa5.71□□□□□ -1.49
PKD2-201ENST00000237596 KRTAP19-7Q3SYF9 63 aa5.69□□□□□ -1.5
PKD2-201ENST00000237596 OBSCNQ5VST9 7968 aa5.59□□□□□ -1.51
PKD2-201ENST00000237596 LCE1BQ5T7P3 118 aa5.54□□□□□ -1.52
PKD2-201ENST00000237596 SYNE2Q8WXH0 6885 aaKnown RBP5.54□□□□□ -1.52
PKD2-201ENST00000237596 LCE1DQ5T752 114 aa5.54□□□□□ -1.52
PKD2-201ENST00000237596 MT1AP04731 61 aa5.53□□□□□ -1.52
PKD2-201ENST00000237596 KRTAP2-3P0C7H8 128 aa5.48□□□□□ -1.53
PKD2-201ENST00000237596 KRTAP2-4Q9BYR9 128 aa5.48□□□□□ -1.53
PKD2-201ENST00000237596 KRTAP2-1Q9BYU5 128 aa5.48□□□□□ -1.53
PKD2-201ENST00000237596 PRM1P04553 51 aa5.46□□□□□ -1.54
PKD2-201ENST00000237596 KRTAP9-6A8MVA2 160 aa5.45□□□□□ -1.54
PKD2-201ENST00000237596 KRTAP9-7A8MTY7 169 aa5.43□□□□□ -1.54
PKD2-201ENST00000237596 LCE1AQ5T7P2 110 aa5.4□□□□□ -1.55
PKD2-201ENST00000237596 KRTAP20-1Q3LI63 56 aa5.38□□□□□ -1.55
PKD2-201ENST00000237596 KRTAP6-3Q3LI67 103 aa5.36□□□□□ -1.55
PKD2-201ENST00000237596 KRTAP4-9Q9BYQ8 210 aa5.34□□□□□ -1.55
PKD2-201ENST00000237596 FCGBPQ9Y6R7 5405 aaPredicted RBP5.28□□□□□ -1.56
PKD2-201ENST00000237596 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.24□□□□□ -1.57
PKD2-201ENST00000237596 LCE5AQ5TCM9 118 aa5.21□□□□□ -1.58
PKD2-201ENST00000237596 USH2AO75445 5202 aa5.18□□□□□ -1.58
PKD2-201ENST00000237596 DSTQ03001 7570 aaKnown RBP5.17□□□□□ -1.58
PKD2-201ENST00000237596 KRTAP6-1Q3LI64 71 aa5.17□□□□□ -1.58
PKD2-201ENST00000237596 KRTAP6-2Q3LI66 62 aa5.12□□□□□ -1.59
PKD2-201ENST00000237596 KMT2DO14686 5537 aa5.1□□□□□ -1.59
PKD2-201ENST00000237596 LCE4AQ5TA78 99 aa5.09□□□□□ -1.6
PKD2-201ENST00000237596 KRTAP2-2Q9BYT5 123 aa5.07□□□□□ -1.6
PKD2-201ENST00000237596 MACF1Q9UPN3 7388 aaKnown RBP5.07□□□□□ -1.6
PKD2-201ENST00000237596 KRTAP9-4Q9BYQ2 154 aa5.06□□□□□ -1.6
PKD2-201ENST00000237596 LCE1CQ5T751 118 aa4.69□□□□□ -1.66
PKD2-201ENST00000237596 LCE1EQ5T753 118 aa4.69□□□□□ -1.66
PKD2-201ENST00000237596 LCE1FQ5T754 118 aa4.69□□□□□ -1.66
PKD2-201ENST00000237596 MUC12Q9UKN1 5478 aa4.69□□□□□ -1.66
PKD2-201ENST00000237596 NEBP20929 6669 aa4.67□□□□□ -1.66
PKD2-201ENST00000237596 MDN1Q9NU22 5596 aa4.67□□□□□ -1.66
PKD2-201ENST00000237596 KRTAP5-9P26371 169 aa4.58□□□□□ -1.68
PKD2-201ENST00000237596 MUC19Q7Z5P9 8384 aa4.57□□□□□ -1.68
PKD2-201ENST00000237596 GPR98Q8WXG9 6306 aa4.54□□□□□ -1.68
PKD2-201ENST00000237596 SSPOA2VEC9 5147 aa4.54□□□□□ -1.68
PKD2-201ENST00000237596 KRTAP9-9Q9BYP9 154 aa4.44□□□□□ -1.7
PKD2-201ENST00000237596 KRTAP4-6Q9BYQ5 205 aa4.38□□□□□ -1.71
PKD2-201ENST00000237596 KRTAP20-2Q3LI61 65 aa4.3□□□□□ -1.72
PKD2-201ENST00000237596 KRTAP5-5Q701N2 237 aaPredicted RBP4.12□□□□□ -1.75
PKD2-201ENST00000237596 KRTAP4-11Q9BYQ6 195 aa4.06□□□□□ -1.76
PKD2-201ENST00000237596 KRTAP5-4Q6L8H1 288 aa3.96□□□□□ -1.78
PKD2-201ENST00000237596 KRTAP4-12Q9BQ66 201 aa3.86□□□□□ -1.79
PKD2-201ENST00000237596 KRTAP4-2Q9BYR5 136 aa3.86□□□□□ -1.79
PKD2-201ENST00000237596 KRTAP4-4Q9BYR3 166 aa3.85□□□□□ -1.79
PKD2-201ENST00000237596 MUC5ACP98088 5654 aa3.79□□□□□ -1.8
PKD2-201ENST00000237596 HMCN1Q96RW7 5635 aa3.7□□□□□ -1.82
PKD2-201ENST00000237596 AHNAK2Q8IVF2 5795 aa3.6□□□□□ -1.83
PKD2-201ENST00000237596 KRTAP5-3Q6L8H2 238 aa3.58□□□□□ -1.84
PKD2-201ENST00000237596 KRTAP5-8O75690 187 aa3.26□□□□□ -1.89
PKD2-201ENST00000237596 KRTAP5-10Q6L8G5 202 aa3.16□□□□□ -1.9
PKD2-201ENST00000237596 KRTAP5-2Q701N4 177 aa3.11□□□□□ -1.91
PKD2-201ENST00000237596 AHNAKQ09666 5890 aaKnown RBP3.05□□□□□ -1.92
PKD2-201ENST00000237596 MUC5BQ9HC84 5762 aaPredicted RBP2.98□□□□□ -1.93
PKD2-201ENST00000237596 PHGR1C9JFL3 82 aa2.9□□□□□ -1.95
PKD2-201ENST00000237596 KRTAP5-11Q6L8G4 156 aa2.82□□□□□ -1.96
PKD2-201ENST00000237596 KRTAP5-1Q6L8H4 278 aa2.75□□□□□ -1.97
PKD2-201ENST00000237596 KRTAP21-2Q3LI59 83 aa2.67□□□□□ -1.98
PKD2-201ENST00000237596 KRTAP21-1Q3LI58 79 aa2.54□□□□□ -2
PKD2-201ENST00000237596 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.45□□□□□ -2.02
PKD2-201ENST00000237596 KRTAP5-7Q6L8G8 165 aa2.32□□□□□ -2.04
PKD2-201ENST00000237596 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 103.4 ms